Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is yecN
Identifier: 30063317
GI number: 30063317
Start: 1922426
End: 1922821
Strand: Direct
Name: yecN
Synonym: S2000
Alternate gene names: 30063317
Gene position: 1922426-1922821 (Clockwise)
Preceding gene: 30063315
Following gene: 30063318
Centisome position: 41.8
GC content: 49.24
Gene sequence:
>396_bases ATGGTAAGCGCGCTATATGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCA GTACCGCGTTGCCTATGGTGACGGTGGTTTTAGCGAACTGCAAAGCGCTATTTGCATTCATGGTAACGCGGTGGAATATA TTCCCATCGCGATTGTGCTGATGCTGTTTATGGAAATGAATGGCGCAGAAACCTGGATGGTGCATATTTGCGGCATCGTT TTGCTTGCTGGTCGTCTGATGCATTATTACGGTTTTCATCACCGTCTGTTTCGCTGGCGACGTTCCGGCATGAGCGCCAC CTGGTGTGCGCTGTTGCTGATGGTGCTGGCGAATCTTTGGTATATGCCCTGGGAGTTGGTTTTCTCCCTGCGTTAG
Upstream 100 bases:
>100_bases GAGATCGGAGCAGTTCCGGCTATTCCACAGCAATCTTCTCTTTTCTGAATTTGCCACCTATCATAGACAGGTGCCATCGG CCATTTTAAAGGGAGTTTGT
Downstream 100 bases:
>100_bases CGCACAATACGCCACTTTCTTTTTCCCGGATTTTTACGTTATGTCTCACCGCGACACGCTATTTTCTGCCCCTATCGCCA GACTGGGCGACTGGACCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MVSALYAVLSALLLMKFSFDVVRLRMQYRVAYGDGGFSELQSAICIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIV LLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWELVFSLR
Sequences:
>Translated_131_residues MVSALYAVLSALLLMKFSFDVVRLRMQYRVAYGDGGFSELQSAICIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIV LLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWELVFSLR >Mature_131_residues MVSALYAVLSALLLMKFSFDVVRLRMQYRVAYGDGGFSELQSAICIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIV LLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWELVFSLR
Specific function: Unknown
COG id: COG3788
COG function: function code R; Uncharacterized relative of glutathione S-transferase, MAPEG superfamily
Gene ontology:
Cell location: Cell inner membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081993, Length=131, Percent_Identity=99.236641221374, Blast_Score=261, Evalue=9e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001129 [H]
Pfam domain/function: PF01124 MAPEG [H]
EC number: NA
Molecular weight: Translated: 15174; Mature: 15174
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 8.4 %Met (Translated Protein) 10.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 8.4 %Met (Mature Protein) 10.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSALYAVLSALLLMKFSFDVVRLRMQYRVAYGDGGFSELQSAICIHGNAVEYIPIAIVL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCHHHHHHHHHH MLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLW HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH YMPWELVFSLR HHHHHHHHCCC >Mature Secondary Structure MVSALYAVLSALLLMKFSFDVVRLRMQYRVAYGDGGFSELQSAICIHGNAVEYIPIAIVL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCHHHHHHHHHH MLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLW HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH YMPWELVFSLR HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]