Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is 30063287
Identifier: 30063287
GI number: 30063287
Start: 1897139
End: 1897459
Strand: Direct
Name: 30063287
Synonym: S1957
Alternate gene names: NA
Gene position: 1897139-1897459 (Clockwise)
Preceding gene: 30063286
Following gene: 30063288
Centisome position: 41.25
GC content: 48.91
Gene sequence:
>321_bases GTGTCCGTTAAACTCAGGCTACCTCAGAGCGCTTATCCGATTTTTGATCGTATTGAAGAAATGGCATGGGCTCGTCACTA CCAGCAGATCGTTCGTGAAGAAAAAGAAACGGAACTGGCGGACGACCTGGAAAAAGGTCTGCCTCAGCACCTGTTTGAAT CGCTCTGCATCGACCATTTGCAACGCCACGGTGCCAATAAACAGGCAATCAGCCACGCATTTGATGATGATGTTGAGTTT CAGGAGCGCATGGCAGAACACATCCGGTACATGGCTGAAACCATTGCCCACCACCAGGTTGATATTGATTTGGAGGACTA A
Upstream 100 bases:
>100_bases AGAACCGTTCTGACAGCTTCGGCTTTGAACTATTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATG CCATTCTATTTCAGGAAGGA
Downstream 100 bases:
>100_bases AATCTATGGCGCTTTTTCAACGAGCAATAAACACACAGGCCTATCTAAAAGCAGGAATTATGGGGTTTGCTGGCGACGGC AAAACCTACACAGCAAGCGA
Product: putative host-nuclease inhibitor protein Gam
Products: NA
Alternate protein names: Host-Nuclease Inhibitor Protein Gam Of Bacteriophage; Host-Nuclease Inhibitor Protein Gam Bacteriophage Origin; Host-Nuclease Inhibitor Protein
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSVKLRLPQSAYPIFDRIEEMAWARHYQQIVREEKETELADDLEKGLPQHLFESLCIDHLQRHGANKQAISHAFDDDVEF QERMAEHIRYMAETIAHHQVDIDLED
Sequences:
>Translated_106_residues MSVKLRLPQSAYPIFDRIEEMAWARHYQQIVREEKETELADDLEKGLPQHLFESLCIDHLQRHGANKQAISHAFDDDVEF QERMAEHIRYMAETIAHHQVDIDLED >Mature_105_residues SVKLRLPQSAYPIFDRIEEMAWARHYQQIVREEKETELADDLEKGLPQHLFESLCIDHLQRHGANKQAISHAFDDDVEFQ ERMAEHIRYMAETIAHHQVDIDLED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12569; Mature: 12438
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKLRLPQSAYPIFDRIEEMAWARHYQQIVREEKETELADDLEKGLPQHLFESLCIDHL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH QRHGANKQAISHAFDDDVEFQERMAEHIRYMAETIAHHQVDIDLED HHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SVKLRLPQSAYPIFDRIEEMAWARHYQQIVREEKETELADDLEKGLPQHLFESLCIDHL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH QRHGANKQAISHAFDDDVEFQERMAEHIRYMAETIAHHQVDIDLED HHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA