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The map label for this gene is yobB [H]

Identifier: 30063255

GI number: 30063255

Start: 1858737

End: 1859162

Strand: Direct

Name: yobB [H]

Synonym: S1919

Alternate gene names: 30063255

Gene position: 1858737-1859162 (Clockwise)

Preceding gene: 30063254

Following gene: 30063256

Centisome position: 40.41

GC content: 51.88

Gene sequence:

>426_bases
ATGACCATCATTGCCGGCCTTCCCGTTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAA
AACGCCTGGGAACTACCATCAGAGTCATGGTGCATGTCTGGGCCGTCGTTCCAGAACCATCACGGTGGTCGATGAACAAC
CGCAAGGTATGGATATGGACCCGACCTGTTCACTGTTTACGACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCG
GCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATG
GGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCGTTCATCACAGGGTTGGC
AAGGCGATATCATTCCATTACGCTAG

Upstream 100 bases:

>100_bases
GCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTTTCACTGTTAGACCCGCTTTGTT
ATGCCGCAACGACCTAGCGA

Downstream 100 bases:

>100_bases
GCTTTTTCGGCCTGGATCATGCCATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATT
GCCTCTGTTGATGTCATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MTIIAGLPVEYNDRFIRGIAVFAPWRKTPGNYHQSHGACLGRRSRTITVVDEQPQGMDMDPTCSLFTTGQCLGEPDLLAS
ARRLQFFSHQYSIAVLMANARGNSALWDEYGRLIVRADRGSLLLVGQRSSQGWQGDIIPLR

Sequences:

>Translated_141_residues
MTIIAGLPVEYNDRFIRGIAVFAPWRKTPGNYHQSHGACLGRRSRTITVVDEQPQGMDMDPTCSLFTTGQCLGEPDLLAS
ARRLQFFSHQYSIAVLMANARGNSALWDEYGRLIVRADRGSLLLVGQRSSQGWQGDIIPLR
>Mature_140_residues
TIIAGLPVEYNDRFIRGIAVFAPWRKTPGNYHQSHGACLGRRSRTITVVDEQPQGMDMDPTCSLFTTGQCLGEPDLLASA
RRLQFFSHQYSIAVLMANARGNSALWDEYGRLIVRADRGSLLLVGQRSSQGWQGDIIPLR

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788148, Length=141, Percent_Identity=99.290780141844, Blast_Score=291, Evalue=2e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: NA

Molecular weight: Translated: 15708; Mature: 15577

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIIAGLPVEYNDRFIRGIAVFAPWRKTPGNYHQSHGACLGRRSRTITVVDEQPQGMDMD
CEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEECCCCCEEEEEECCCCCCCCC
PTCSLFTTGQCLGEPDLLASARRLQFFSHQYSIAVLMANARGNSALWDEYGRLIVRADRG
CCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHCCCEEEEEECCC
SLLLVGQRSSQGWQGDIIPLR
CEEEEECCCCCCCCCCEEECC
>Mature Secondary Structure 
TIIAGLPVEYNDRFIRGIAVFAPWRKTPGNYHQSHGACLGRRSRTITVVDEQPQGMDMD
EEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEECCCCCEEEEEECCCCCCCCC
PTCSLFTTGQCLGEPDLLASARRLQFFSHQYSIAVLMANARGNSALWDEYGRLIVRADRG
CCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHCCCEEEEEECCC
SLLLVGQRSSQGWQGDIIPLR
CEEEEECCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]