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The map label for this gene is ydiU [H]

Identifier: 30063027

GI number: 30063027

Start: 1594140

End: 1595576

Strand: Direct

Name: ydiU [H]

Synonym: S1642

Alternate gene names: 30063027

Gene position: 1594140-1595576 (Clockwise)

Preceding gene: 30063026

Following gene: 30063031

Centisome position: 34.66

GC content: 52.12

Gene sequence:

>1437_bases
ATGACCCTGTCTTTTATTACCCGCTGGCGCGATGAATTGCCAGAAACCTATACAGCACTTTCCCCTACGCCTTTAAATAA
TGCCCGGCTGATTTGGCATAATACCGAACTCGCTAACACGCTGAGTATTCCATCGTCGCTGTTTAAAAATGCCGCAGGTG
TCTGGGGCGGCGAAACCCTACTGCCTGGTATGTCACCACTGGCACAGGTTTACAGTGGTCATCAGTTCGTCGTCTGGGCG
GGCCAACTGGGTGATGGGCGCGGCATTTTACTTGGCGAACAACTGCTTGCTGATGGCACTACAATGGACTGGCATCTGAA
AGGTGCTGGCCTGACGCCTTATTCGCGAATGGGTGATGGACGGGCGGTTTTACGTTCGACGATACGAGAAAGTCTCGCCA
GTGAGGCGATGCATTATCTGGGCATTCCGACGACCCGCGCGTTAAGTATCGTCACCAGCGATTCGCCAGTGTATCGGGAA
ACGGTGGAGCCAGGCGCGATGCTGATGCGTGTGGCACCAAGTCATCTGCGCTTTGGTCATTTCGAACATTTTTACTATCG
CCGCGAGCCGGAAAAGGTTCGTCAGTTGGCTGACTTTGCCATTCGTCATTACTGGTCACATCTTGAAGACGATGAGGACA
AATACCGTCTCTGGTTTAACGATGTTGTCGCACGTACCGCGTCGTTAATTGCCCAATGGCAGACGGTCGGCTTTGCACAT
GGGGTGATGAATACCGACAACATGTCGCTGCTGGGACTGACGCTTGATTACGGGCCGTTTGGTTTTCTTGATGATTACGA
ACCCGGTTTTATTTGTAATCACTCGGATCATCAAGGGCGTTATAGCTTTGATAATCAACCTGCTGTCGCGTTGTGGAATT
TACAGCGTCTGGCGCAGACATTGTCACCATTTGTTGCCGTAGATGCCCTGAATGAGGCCCTGGACAGCTATCAGCAGGTT
TTGTTGACGCATTATGGACAACGGATGCGGCAGAAACTGGGCTTCATGACGGAGCAAAAAGAGGATAACGCGCTACTGAA
TGAATTATTCAGTCTGATGGCGCGAGAGCGCAGCGATTATACCCGCACATTCCGCATGCTGAGTCTGACCGAGCAGCACA
GCGCGGCGTCACCGCTACGTGAGGAGTTTATTGATCGTGCGGCATTTGATGACTGGTTTGCCCGTTATCGGGGGCGTTTG
CAACAAGACGAGGTTAGCGATAGTGAGCGTCAGCAACTGATGCAAAGCGTTAACCCAGCTCTGGTATTGCGCAACTGGTT
GGCGCAACGGGCGATTGAAGCGGCAGAAAAGGGTGATATGATGGAATTGCACCGCCTGCATGAGGCGTTGCGAAATCCTT
TCAGCGACAGAGATGATGACTATGTCAGTCGTCCACCTGACTGGGGTAAACGGCTGGAAGTCAGCTGCTCGAGTTAA

Upstream 100 bases:

>100_bases
TCCTATAAATCAGATAACGACGTTGGTTCAGCGATAACCCTCCTGTTTGCTGGTGTTTAAGACGAGAGTAACCGTCTACA
CTATCAAACAGATAGGATCT

Downstream 100 bases:

>100_bases
AGGCTACTTAGTTAACAGCAGCTTGCCAGCCTGAGTTTTACGGAGCAGATATTCTTGCCCGTCATGATCGATAATCAGTT
TGCCATCCGGACCTAACAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MTLSFITRWRDELPETYTALSPTPLNNARLIWHNTELANTLSIPSSLFKNAAGVWGGETLLPGMSPLAQVYSGHQFVVWA
GQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE
TVEPGAMLMRVAPSHLRFGHFEHFYYRREPEKVRQLADFAIRHYWSHLEDDEDKYRLWFNDVVARTASLIAQWQTVGFAH
GVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSDHQGRYSFDNQPAVALWNLQRLAQTLSPFVAVDALNEALDSYQQV
LLTHYGQRMRQKLGFMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTEQHSAASPLREEFIDRAAFDDWFARYRGRL
QQDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMMELHRLHEALRNPFSDRDDDYVSRPPDWGKRLEVSCSS

Sequences:

>Translated_478_residues
MTLSFITRWRDELPETYTALSPTPLNNARLIWHNTELANTLSIPSSLFKNAAGVWGGETLLPGMSPLAQVYSGHQFVVWA
GQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE
TVEPGAMLMRVAPSHLRFGHFEHFYYRREPEKVRQLADFAIRHYWSHLEDDEDKYRLWFNDVVARTASLIAQWQTVGFAH
GVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSDHQGRYSFDNQPAVALWNLQRLAQTLSPFVAVDALNEALDSYQQV
LLTHYGQRMRQKLGFMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTEQHSAASPLREEFIDRAAFDDWFARYRGRL
QQDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMMELHRLHEALRNPFSDRDDDYVSRPPDWGKRLEVSCSS
>Mature_477_residues
TLSFITRWRDELPETYTALSPTPLNNARLIWHNTELANTLSIPSSLFKNAAGVWGGETLLPGMSPLAQVYSGHQFVVWAG
QLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRET
VEPGAMLMRVAPSHLRFGHFEHFYYRREPEKVRQLADFAIRHYWSHLEDDEDKYRLWFNDVVARTASLIAQWQTVGFAHG
VMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSDHQGRYSFDNQPAVALWNLQRLAQTLSPFVAVDALNEALDSYQQVL
LTHYGQRMRQKLGFMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTEQHSAASPLREEFIDRAAFDDWFARYRGRLQ
QDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMMELHRLHEALRNPFSDRDDDYVSRPPDWGKRLEVSCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=383, Percent_Identity=43.0809399477807, Blast_Score=292, Evalue=5e-79,
Organism=Escherichia coli, GI1787999, Length=478, Percent_Identity=97.6987447698745, Blast_Score=969, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6325034, Length=344, Percent_Identity=36.9186046511628, Blast_Score=219, Evalue=1e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 54649; Mature: 54518

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSFITRWRDELPETYTALSPTPLNNARLIWHNTELANTLSIPSSLFKNAAGVWGGETL
CCHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEECCHHHHHHCCCHHHHHHCCCCCCCCHH
LPGMSPLAQVYSGHQFVVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDG
CCCCHHHHHHHCCCEEEEEECCCCCCCEEEECHHHHHCCCCEEEEECCCCCCCHHHCCCH
RAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETVEPGAMLMRVAPSHLRFGH
HHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCHHHHHCCCHHHHHHHCHHHHCCCC
FEHFYYRREPEKVRQLADFAIRHYWSHLEDDEDKYRLWFNDVVARTASLIAQWQTVGFAH
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSDHQGRYSFDNQPAVALWNLQRLAQT
CCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
LSPFVAVDALNEALDSYQQVLLTHYGQRMRQKLGFMTEQKEDNALLNELFSLMARERSDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
TRTFRMLSLTEQHSAASPLREEFIDRAAFDDWFARYRGRLQQDEVSDSERQQLMQSVNPA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCHH
LVLRNWLAQRAIEAAEKGDMMELHRLHEALRNPFSDRDDDYVSRPPDWGKRLEVSCSS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
TLSFITRWRDELPETYTALSPTPLNNARLIWHNTELANTLSIPSSLFKNAAGVWGGETL
CHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEECCHHHHHHCCCHHHHHHCCCCCCCCHH
LPGMSPLAQVYSGHQFVVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDG
CCCCHHHHHHHCCCEEEEEECCCCCCCEEEECHHHHHCCCCEEEEECCCCCCCHHHCCCH
RAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETVEPGAMLMRVAPSHLRFGH
HHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCHHHHHCCCHHHHHHHCHHHHCCCC
FEHFYYRREPEKVRQLADFAIRHYWSHLEDDEDKYRLWFNDVVARTASLIAQWQTVGFAH
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSDHQGRYSFDNQPAVALWNLQRLAQT
CCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
LSPFVAVDALNEALDSYQQVLLTHYGQRMRQKLGFMTEQKEDNALLNELFSLMARERSDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
TRTFRMLSLTEQHSAASPLREEFIDRAAFDDWFARYRGRLQQDEVSDSERQQLMQSVNPA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCHH
LVLRNWLAQRAIEAAEKGDMMELHRLHEALRNPFSDRDDDYVSRPPDWGKRLEVSCSS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA