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The map label for this gene is ydjA

Identifier: 30062972

GI number: 30062972

Start: 1532451

End: 1533002

Strand: Direct

Name: ydjA

Synonym: S1573

Alternate gene names: 30062972

Gene position: 1532451-1533002 (Clockwise)

Preceding gene: 30062968

Following gene: 30062973

Centisome position: 33.32

GC content: 55.25

Gene sequence:

>552_bases
ATGGATGCACTCGAACTATTGATCAATCGCCGTAGCGCCTCCCGCCTGGCTGAACCCGCGCCAACGGGTGAACAACTGCA
AAACATCCTGCGTGCGGGTATGCGTGCGCCGGACCATAAGTCCATGCAACCGTGGCATTTTTTTGTGATTGAAGGGGAAG
GGTGCGAGCGTTTCAGCGCCGTACTGGAACAGGGGGCGATTGCTGCCGGTAGTGATGATAAAGCTATCGACAAAGCCCGT
AATGCGCCGTTCCGCGCACCGCTCATCATCACGGTGGTGGCGAAATGCAAAGAAAATCATAAAGTCCCGCGATGGGAACA
GGAAATGTCTGCCGGATGCGCGGTCATGGCGATGCAAATGGCAGCCGTTGCCCAGGGATTTGGCGGCATCTGGCGCAGTG
GCGCATTAACTGAAAGTCCGGTAGTGCGTGAAGCATTCGGTTGCCGTGAGCAGGATAAAATTGTCGGTTTTCTCTACCTC
GGCACGCCGCAGTTGAAAGCATCTACGTCGATTAACGTCCCGGACCCGACGCCGTTTGTAACTTATTTCTGA

Upstream 100 bases:

>100_bases
ACCCAACCGGCACTTGTCAGCAGGAATTGCGGACTGTGCTGTAACAAAATCCACTCTCGTGTTAATTTTGTGAATAAATA
TCACGACAGGAGTTAATCAA

Downstream 100 bases:

>100_bases
TAATTGTCGCGAAACTGTCTGGATTGTGAGCAAAGGCGCAGGAATTCAGACACTCTCACTTATCACTTCACGGAATGAGG
GTTACCATACCCGGATTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MDALELLINRRSASRLAEPAPTGEQLQNILRAGMRAPDHKSMQPWHFFVIEGEGCERFSAVLEQGAIAAGSDDKAIDKAR
NAPFRAPLIITVVAKCKENHKVPRWEQEMSAGCAVMAMQMAAVAQGFGGIWRSGALTESPVVREAFGCREQDKIVGFLYL
GTPQLKASTSINVPDPTPFVTYF

Sequences:

>Translated_183_residues
MDALELLINRRSASRLAEPAPTGEQLQNILRAGMRAPDHKSMQPWHFFVIEGEGCERFSAVLEQGAIAAGSDDKAIDKAR
NAPFRAPLIITVVAKCKENHKVPRWEQEMSAGCAVMAMQMAAVAQGFGGIWRSGALTESPVVREAFGCREQDKIVGFLYL
GTPQLKASTSINVPDPTPFVTYF
>Mature_183_residues
MDALELLINRRSASRLAEPAPTGEQLQNILRAGMRAPDHKSMQPWHFFVIEGEGCERFSAVLEQGAIAAGSDDKAIDKAR
NAPFRAPLIITVVAKCKENHKVPRWEQEMSAGCAVMAMQMAAVAQGFGGIWRSGALTESPVVREAFGCREQDKIVGFLYL
GTPQLKASTSINVPDPTPFVTYF

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=183, Percent_Identity=98.9071038251366, Blast_Score=374, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 20005; Mature: 20005

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDALELLINRRSASRLAEPAPTGEQLQNILRAGMRAPDHKSMQPWHFFVIEGEGCERFSA
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHH
VLEQGAIAAGSDDKAIDKARNAPFRAPLIITVVAKCKENHKVPRWEQEMSAGCAVMAMQM
HHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHH
AAVAQGFGGIWRSGALTESPVVREAFGCREQDKIVGFLYLGTPQLKASTSINVPDPTPFV
HHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEE
TYF
ECC
>Mature Secondary Structure
MDALELLINRRSASRLAEPAPTGEQLQNILRAGMRAPDHKSMQPWHFFVIEGEGCERFSA
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHH
VLEQGAIAAGSDDKAIDKARNAPFRAPLIITVVAKCKENHKVPRWEQEMSAGCAVMAMQM
HHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHH
AAVAQGFGGIWRSGALTESPVVREAFGCREQDKIVGFLYLGTPQLKASTSINVPDPTPFV
HHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEE
TYF
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]