Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is ydjG [H]
Identifier: 30062966
GI number: 30062966
Start: 1525200
End: 1526135
Strand: Direct
Name: ydjG [H]
Synonym: S1567
Alternate gene names: 30062966
Gene position: 1525200-1526135 (Clockwise)
Preceding gene: 30062965
Following gene: 30062967
Centisome position: 33.16
GC content: 47.76
Gene sequence:
>936_bases ATGGGGTTGGGGACATGGGCCATTGGCGGCGGTCCTGCATGGAATGGCGATCTCGATCGGCAAATATGTATTGATACGAT TCTTGAAGCCCATCGTTGTGGCATTAATCTGATTGATACTGCGCTAGGATATAACTTTGGCAATAGTGAAGTTATCGTCG GTCAGGCGTTAAAAAAACTGCCCCGTGAACAGGTTGTAGTAGAAACCAAATGCGGCATTGTCTGGGAACGAAAAGGAAGT TTATTCAACAAAGTTGGCGATCGGCAGTTGTATAAAAACCTTTCCCCGGAATCTATCCGCGAAGAGGTAGAAGCCAGCTT GCAACGTCTGGGTATTGATTACATCGATATCTATATGACGCACTGGCAGTCGGTGCCGCCATTTTTTACGCCGATAGCTG AAACTGTCGCAGTGCTTAATGAGTTAAAGGCTGAAGGGAAAATTCGCGCTATAGGCGCTGCTAACGTCGATGCTGACCAT ATCCGCGAGTATCTGCAATATGGTGAACTGGATATTATTCAGGCGAAATACAGTATTCTCGACCGGGCAATGGAAAACGA ACTGCTGCCGCTATGTCGTGATAATGGCATTGTGGTTCAGGTTTATTCCCCGCTAGAGCAGGGATTGTTGACCGGCACTA TCACTCGTGATTACGTTCCGGGCGGCGCTCGGGCAAATAAAGTCTGGTTCCAGCGTGAAAACATGCTGAAAGTGATTGAT ATGCTTGAACAGTGGCAGCCACTTTGTGCTCGTTATCAGTGCACAATTCCCACTCTGGCACTGGCGTGGATATTAAAACA GAGTGATTTAATCTCCATTCTTAGTGGGGCTACTGCACCGGAACAGGTACGCGAAAATGTCGCGGCACTGAATATCAACT TATCGGATGCAGACGCAACATTGATGAGGGAAATGGCAGAGGCCCTGGAGCGTTAA
Upstream 100 bases:
>100_bases AAACAGAAAGCTGGTCGAACAATTGCTGGAAGAATACGAAGGATAATGAAGGCAAATGAAAAAGATACCTTTAGGCACGA CGGATATAACGCTTTCGCGA
Downstream 100 bases:
>100_bases ATACTCAACACGATTCACCTCTGTTTCTGTGAAAACTGTGATGAAAATCTGTGATTCAAATAGGTTATTTTGAAAGTAAA CATCGGTTATGCGATAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MGLGTWAIGGGPAWNGDLDRQICIDTILEAHRCGINLIDTALGYNFGNSEVIVGQALKKLPREQVVVETKCGIVWERKGS LFNKVGDRQLYKNLSPESIREEVEASLQRLGIDYIDIYMTHWQSVPPFFTPIAETVAVLNELKAEGKIRAIGAANVDADH IREYLQYGELDIIQAKYSILDRAMENELLPLCRDNGIVVQVYSPLEQGLLTGTITRDYVPGGARANKVWFQRENMLKVID MLEQWQPLCARYQCTIPTLALAWILKQSDLISILSGATAPEQVRENVAALNINLSDADATLMREMAEALER
Sequences:
>Translated_311_residues MGLGTWAIGGGPAWNGDLDRQICIDTILEAHRCGINLIDTALGYNFGNSEVIVGQALKKLPREQVVVETKCGIVWERKGS LFNKVGDRQLYKNLSPESIREEVEASLQRLGIDYIDIYMTHWQSVPPFFTPIAETVAVLNELKAEGKIRAIGAANVDADH IREYLQYGELDIIQAKYSILDRAMENELLPLCRDNGIVVQVYSPLEQGLLTGTITRDYVPGGARANKVWFQRENMLKVID MLEQWQPLCARYQCTIPTLALAWILKQSDLISILSGATAPEQVRENVAALNINLSDADATLMREMAEALER >Mature_310_residues GLGTWAIGGGPAWNGDLDRQICIDTILEAHRCGINLIDTALGYNFGNSEVIVGQALKKLPREQVVVETKCGIVWERKGSL FNKVGDRQLYKNLSPESIREEVEASLQRLGIDYIDIYMTHWQSVPPFFTPIAETVAVLNELKAEGKIRAIGAANVDADHI REYLQYGELDIIQAKYSILDRAMENELLPLCRDNGIVVQVYSPLEQGLLTGTITRDYVPGGARANKVWFQRENMLKVIDM LEQWQPLCARYQCTIPTLALAWILKQSDLISILSGATAPEQVRENVAALNINLSDADATLMREMAEALER
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436966, Length=308, Percent_Identity=30.1948051948052, Blast_Score=112, Evalue=3e-25, Organism=Homo sapiens, GI27436964, Length=308, Percent_Identity=30.1948051948052, Blast_Score=112, Evalue=3e-25, Organism=Homo sapiens, GI27436962, Length=308, Percent_Identity=30.1948051948052, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI4504825, Length=325, Percent_Identity=28, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI27436969, Length=325, Percent_Identity=28, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI223718702, Length=283, Percent_Identity=27.5618374558304, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI27436971, Length=312, Percent_Identity=27.8846153846154, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI41327764, Length=281, Percent_Identity=26.3345195729537, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI41152114, Length=282, Percent_Identity=26.5957446808511, Blast_Score=83, Evalue=4e-16, Organism=Escherichia coli, GI1788070, Length=311, Percent_Identity=99.0353697749196, Blast_Score=632, Evalue=0.0, Organism=Escherichia coli, GI87081735, Length=296, Percent_Identity=33.445945945946, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1789199, Length=326, Percent_Identity=29.4478527607362, Blast_Score=101, Evalue=7e-23, Organism=Escherichia coli, GI1788081, Length=305, Percent_Identity=28.1967213114754, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1789375, Length=281, Percent_Identity=27.0462633451957, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1787674, Length=299, Percent_Identity=25.0836120401338, Blast_Score=75, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17564128, Length=323, Percent_Identity=24.7678018575851, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17552492, Length=315, Percent_Identity=25.0793650793651, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17538386, Length=278, Percent_Identity=27.3381294964029, Blast_Score=69, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6325169, Length=290, Percent_Identity=26.2068965517241, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6323998, Length=313, Percent_Identity=23.961661341853, Blast_Score=74, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6319958, Length=293, Percent_Identity=21.8430034129693, Blast_Score=72, Evalue=9e-14, Organism=Drosophila melanogaster, GI24646159, Length=302, Percent_Identity=29.4701986754967, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24646155, Length=305, Percent_Identity=27.5409836065574, Blast_Score=93, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 34731; Mature: 34600
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLGTWAIGGGPAWNGDLDRQICIDTILEAHRCGINLIDTALGYNFGNSEVIVGQALKKL CCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHC PREQVVVETKCGIVWERKGSLFNKVGDRQLYKNLSPESIREEVEASLQRLGIDYIDIYMT CHHHEEEEECCCEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHH HWQSVPPFFTPIAETVAVLNELKAEGKIRAIGAANVDADHIREYLQYGELDIIQAKYSIL HHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHH DRAMENELLPLCRDNGIVVQVYSPLEQGLLTGTITRDYVPGGARANKVWFQRENMLKVID HHHHHHCCCCCCCCCCEEEEEECHHHCCCEEECHHHCCCCCCCCCCHHHHHHHHHHHHHH MLEQWQPLCARYQCTIPTLALAWILKQSDLISILSGATAPEQVRENVAALNINLSDADAT HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHEEEEECCCHHHH LMREMAEALER HHHHHHHHHCC >Mature Secondary Structure GLGTWAIGGGPAWNGDLDRQICIDTILEAHRCGINLIDTALGYNFGNSEVIVGQALKKL CCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHC PREQVVVETKCGIVWERKGSLFNKVGDRQLYKNLSPESIREEVEASLQRLGIDYIDIYMT CHHHEEEEECCCEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHH HWQSVPPFFTPIAETVAVLNELKAEGKIRAIGAANVDADHIREYLQYGELDIIQAKYSIL HHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHH DRAMENELLPLCRDNGIVVQVYSPLEQGLLTGTITRDYVPGGARANKVWFQRENMLKVID HHHHHHCCCCCCCCCCEEEEEECHHHCCCEEECHHHCCCCCCCCCCHHHHHHHHHHHHHH MLEQWQPLCARYQCTIPTLALAWILKQSDLISILSGATAPEQVRENVAALNINLSDADAT HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHEEEEECCCHHHH LMREMAEALER HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]