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The map label for this gene is ydjH [H]

Identifier: 30062965

GI number: 30062965

Start: 1524198

End: 1525145

Strand: Direct

Name: ydjH [H]

Synonym: S1566

Alternate gene names: 30062965

Gene position: 1524198-1525145 (Clockwise)

Preceding gene: 30062964

Following gene: 30062966

Centisome position: 33.14

GC content: 45.04

Gene sequence:

>948_bases
ATGGATAATCTCGACGTTATTTGTATAGGTGCCGCTATTGTTGATATTCCATTACAACCGGTCAGTAAAAATATCTTTGA
TGTAGATTCTTATCCTCTTGAAAGAATCGCAATGAGCACCGGGGGCGATGCAATAAATGAAGCAACAATTATTTCTCGTC
TGGGGCATCGTACCGCATTAATGAGCCGCATTGGTAAAGATGCCTCAGGGCAATTTATTCTCGACCATTGTCGCAAAGAG
AATATTGATATTCAAAGCCTGAAACAGGACGTCAGCATAGATACATCTATTAACGTTGGACTGGTGACGGAGGATGGCGA
GCGGACGTTTGTCACGAACCGTAACGGCAGTTTGTGGAAATTAAATATTGACGATGTTGATTTTGCGCGGTTTCCTCAGG
CGAAATTATTATCACTGGCCAGTATTTTCAACAGTCCTCTATTGGATGGTAAAGCGCTAACAGAAATTTTTACGCAAGCG
AAAGCCCGGCAGATGATCATTTGTGCCGATATGATCAAACCGCGGTTGAATGAAACGCTGGATGATATTTGCGAAGCATT
GAGTTATGTCGATTATCTGTTTCCAAATTTTGCCGAGGAAAAATTACTCACAGGGAAAGAGACACTGGATGAAATTGCTG
ACTGCTTTCTTGCGTGCGGCGTAAAAACGGTGGTGATTAAAACGGGTAAAGACGGCTGCTTTATCAAGCGTGGTGACATG
ACGATGAAGGTGCCGGCGGTCGCAGGAATAACCGCCATCGACACCATTGGCGCGGGCGATAACTTTGCTTCAGGTTTTAT
TGCGGCACTGTTAGAAGGCAAAAATCTGCGTGAATGCGCACGCTTTGCCAATGCAACGGCGGCTATCTCGGTTCTAAGCG
TCGGTGCCACCACCGGCGTAAAAAACAGAAAGCTGGTCGAACAATTGCTGGAAGAATACGAAGGATAA

Upstream 100 bases:

>100_bases
CCTTTCCTGCATTTAGAACGTGAAGTACGTAAAGCTGTAAAAGAACGGGCATTGGAAAAAATTGAACTGTTCGGTTCTGA
TGGCAAAGCGGAATAATGAT

Downstream 100 bases:

>100_bases
TGAAGGCAAATGAAAAAGATACCTTTAGGCACGACGGATATAACGCTTTCGCGAATGGGGTTGGGGACATGGGCCATTGG
CGGCGGTCCTGCATGGAATG

Product: putative kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMSTGGDAINEATIISRLGHRTALMSRIGKDASGQFILDHCRKE
NIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFPQAKLLSLASIFNSPLLDGKALTEIFTQA
KARQMIICADMIKPRLNETLDDICEALSYVDYLFPNFAEEKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDM
TMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG

Sequences:

>Translated_315_residues
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMSTGGDAINEATIISRLGHRTALMSRIGKDASGQFILDHCRKE
NIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFPQAKLLSLASIFNSPLLDGKALTEIFTQA
KARQMIICADMIKPRLNETLDDICEALSYVDYLFPNFAEEKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDM
TMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG
>Mature_315_residues
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMSTGGDAINEATIISRLGHRTALMSRIGKDASGQFILDHCRKE
NIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFPQAKLLSLASIFNSPLLDGKALTEIFTQA
KARQMIICADMIKPRLNETLDDICEALSYVDYLFPNFAEEKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDM
TMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87081971, Length=315, Percent_Identity=98.7301587301587, Blast_Score=633, Evalue=0.0,
Organism=Escherichia coli, GI87082281, Length=276, Percent_Identity=28.2608695652174, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1790193, Length=301, Percent_Identity=30.2325581395349, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1789775, Length=272, Percent_Identity=25.3676470588235, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1788484, Length=266, Percent_Identity=24.812030075188, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 34192; Mature: 34192

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMSTGGDAINEATIISRLGHRTAL
CCCCCEEEECCEEEECCCCHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
MSRIGKDASGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWK
HHHHCCCCCCCHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEEECCCEEEEECCCCCEEE
LNIDDVDFARFPQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRLNETL
EECCCCCHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHH
DDICEALSYVDYLFPNFAEEKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDM
HHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCC
TMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGV
EEECCCHHCCHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHCCCCCC
KNRKLVEQLLEEYEG
CHHHHHHHHHHHHCC
>Mature Secondary Structure
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMSTGGDAINEATIISRLGHRTAL
CCCCCEEEECCEEEECCCCHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
MSRIGKDASGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWK
HHHHCCCCCCCHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEEECCCEEEEECCCCCEEE
LNIDDVDFARFPQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRLNETL
EECCCCCHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHH
DDICEALSYVDYLFPNFAEEKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDM
HHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCC
TMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGV
EEECCCHHCCHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHCCCCCC
KNRKLVEQLLEEYEG
CHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]