Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is rimL
Identifier: 30062898
GI number: 30062898
Start: 1453348
End: 1453884
Strand: Direct
Name: rimL
Synonym: S1491
Alternate gene names: 30062898
Gene position: 1453348-1453884 (Clockwise)
Preceding gene: 30062897
Following gene: 30062900
Centisome position: 31.6
GC content: 43.95
Gene sequence:
>537_bases ATGACTGAAACGATAAAAGTAAGCGAATCACTTGAATTACATGCTGTTGCGGAAAGTCACGTCACACCTCTTTATCAGTT AATCTGTAAAAATAAAACCTGGTTACAGCAGTCGCTAAACTGGCCGCAGTTCGTTCAGAGTGAAGAGGACACGCGAAAAA CGGTGCAGGGTAATGTGATGTTGCATCAACGCGGCTATGCCAAAATGTTCATGATTTTCAAAGAAGATGAACTTATCGGC GTTATCTCGTTTAATCGTATTGAACCACTGAATAAAACTGCTGAAATCGGCTACTGGCTGGACGAATCTCATCAGGGGCA GGGGATCATTTCTCAGGCGCTGCAGACATTGATTCATCATTACGCTCAGTCTGGTGAACTTAGACGCTTCGTGATCAAAT GTCGGGTGGACAATCCGCAAAGCAACCAGGTCGCTTTGCGCAATGGTTTTATCCTTGAAGGTTGCCTGAAACAGGCTGAG TTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCATAA
Upstream 100 bases:
>100_bases TCAAAATCCTGCAGCAGGAGAGCGTCAAAGAGGTGTAAACTTTCCTAAGCCGCCAGCCAGGCGGCTTTTTTAACAACAGC ATGGATTGACTGGAGATAAG
Downstream 100 bases:
>100_bases TAACCCTGCCAGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCAT CAAAGGCTTCAACGACGGCG
Product: ribosomal-protein-L7/L12-serine acetyltransferase
Products: NA
Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein L7/L12 [H]
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MTETIKVSESLELHAVAESHVTPLYQLICKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIG VISFNRIEPLNKTAEIGYWLDESHQGQGIISQALQTLIHHYAQSGELRRFVIKCRVDNPQSNQVALRNGFILEGCLKQAE FLNDAYDDVNLYARIIDS
Sequences:
>Translated_178_residues MTETIKVSESLELHAVAESHVTPLYQLICKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIG VISFNRIEPLNKTAEIGYWLDESHQGQGIISQALQTLIHHYAQSGELRRFVIKCRVDNPQSNQVALRNGFILEGCLKQAE FLNDAYDDVNLYARIIDS >Mature_177_residues TETIKVSESLELHAVAESHVTPLYQLICKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGV ISFNRIEPLNKTAEIGYWLDESHQGQGIISQALQTLIHHYAQSGELRRFVIKCRVDNPQSNQVALRNGFILEGCLKQAEF LNDAYDDVNLYARIIDS
Specific function: This enzyme acetylates the N-terminal serine of ribosomal protein L7/L12 [H]
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1787697, Length=178, Percent_Identity=98.314606741573, Blast_Score=368, Evalue=1e-103,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 20529; Mature: 20397
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETIKVSESLELHAVAESHVTPLYQLICKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVM CCCEEECCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHCCCHHHHHHHHCCEE LHQRGYAKMFMIFKEDELIGVISFNRIEPLNKTAEIGYWLDESHQGQGIISQALQTLIHH EEECCCEEEEEEEECCCEEEEEECCCCCCCCCHHHCCEEECCCCCCCCHHHHHHHHHHHH YAQSGELRRFVIKCRVDNPQSNQVALRNGFILEGCLKQAEFLNDAYDDVNLYARIIDS HHCCCCEEEEEEEEECCCCCCCEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHEEECC >Mature Secondary Structure TETIKVSESLELHAVAESHVTPLYQLICKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVM CCEEECCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHCCCHHHHHHHHCCEE LHQRGYAKMFMIFKEDELIGVISFNRIEPLNKTAEIGYWLDESHQGQGIISQALQTLIHH EEECCCEEEEEEEECCCEEEEEECCCCCCCCCHHHCCEEECCCCCCCCHHHHHHHHHHHH YAQSGELRRFVIKCRVDNPQSNQVALRNGFILEGCLKQAEFLNDAYDDVNLYARIIDS HHCCCCEEEEEEEEECCCCCCCEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2671655; 9097039; 9278503 [H]