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The map label for this gene is ydcH

Identifier: 30062897

GI number: 30062897

Start: 1453118

End: 1453285

Strand: Direct

Name: ydcH

Synonym: S1490

Alternate gene names: 30062897

Gene position: 1453118-1453285 (Clockwise)

Preceding gene: 30062895

Following gene: 30062898

Centisome position: 31.59

GC content: 42.86

Gene sequence:

>168_bases
ATGTCCTTGTTCGATAAACACAATAAACTTGATCATGAAATTGCCAGAAAGGAAGGTTCCGACGGTCGAGGGTACAATGC
GGAAGTGGTCCGCATGAAAAAACAAAAGCTACAGTTAAAAGATGAGATGCTCAAAATCCTGCAGCAGGAGAGCGTCAAAG
AGGTGTAA

Upstream 100 bases:

>100_bases
TGTATTTCAGATACACCGTGTCAGCCACTAACAGGGAGTGCGTATGTTTCCAGAATACCGAGATTTAATATCCCGTCTGA
AAAACGAAAATCCTCGCTTT

Downstream 100 bases:

>100_bases
ACTTTCCTAAGCCGCCAGCCAGGCGGCTTTTTTAACAACAGCATGGATTGACTGGAGATAAGATGACTGAAACGATAAAA
GTAAGCGAATCACTTGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 55; Mature: 54

Protein sequence:

>55_residues
MSLFDKHNKLDHEIARKEGSDGRGYNAEVVRMKKQKLQLKDEMLKILQQESVKEV

Sequences:

>Translated_55_residues
MSLFDKHNKLDHEIARKEGSDGRGYNAEVVRMKKQKLQLKDEMLKILQQESVKEV
>Mature_54_residues
SLFDKHNKLDHEIARKEGSDGRGYNAEVVRMKKQKLQLKDEMLKILQQESVKEV

Specific function: Unknown

COG id: COG2841

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081906, Length=55, Percent_Identity=100, Blast_Score=110, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YDCH_ECOLI (P0ACW6)

Other databases:

- EMBL:   X15860
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   E64894
- RefSeq:   AP_002049.1
- RefSeq:   NP_415943.4
- ProteinModelPortal:   P0ACW6
- SMR:   P0ACW6
- STRING:   P0ACW6
- EnsemblBacteria:   EBESCT00000002228
- EnsemblBacteria:   EBESCT00000014921
- GeneID:   945997
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5823
- KEGG:   eco:b1426
- EchoBASE:   EB2706
- EcoGene:   EG12865
- eggNOG:   COG2841
- GeneTree:   EBGT00050000011806
- HOGENOM:   HBG625503
- OMA:   EGFDGRG
- ProtClustDB:   PRK11415
- BioCyc:   EcoCyc:EG12865-MONOMER
- Genevestigator:   P0ACW6
- InterPro:   IPR007420

Pfam domain/function: PF04325 DUF465

EC number: NA

Molecular weight: Translated: 6471; Mature: 6339

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFDKHNKLDHEIARKEGSDGRGYNAEVVRMKKQKLQLKDEMLKILQQESVKEV
CCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLFDKHNKLDHEIARKEGSDGRGYNAEVVRMKKQKLQLKDEMLKILQQESVKEV
CCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2671655; 9097039; 9278503; 7567469