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The map label for this gene is ycjS

Identifier: 30062834

GI number: 30062834

Start: 1371597

End: 1372652

Strand: Direct

Name: ycjS

Synonym: S1404

Alternate gene names: 30062834

Gene position: 1371597-1372652 (Clockwise)

Preceding gene: 30062833

Following gene: 30062835

Centisome position: 29.82

GC content: 54.55

Gene sequence:

>1056_bases
GTGAAAAGTGCAATGACAAGCTCTCCGCTGCGGGTCGCGATAATAGGCGCGGGCCAGGTGGCGGATAAGGTTCATGCTTC
GTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCTGGCAGAAA
AATACGGGAATGCATCCGTGTGGGACGATCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCGGCTCA
CCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCAGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCAT
GACGACAGAACAGGCGTGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTT
TTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTGGGAGAGATTTACGTTACCACCGCCCGCGCC
CTGCGTCGCTGCGGCGTTCCCGGCTGGGGTGTCTTTACCAATAAAGAACTGCAGGGTGGTGGCCTGCTGATCGACATCGG
CATTCATATGCTGGATGCTGCGATGTATGTGCTGGGCTTTCCGGCGGTGAAAAGCGTGAATGCGCATAGTTTTCAAAAGA
TCGGCACGCAAAAGAGCTGTGGTCAATTTGGCGAGTGGGATCCGGCAACTTACAGCGTCGAAGATTCGCTGTTTGGCACC
ATTGAATTTCATAACGGCGGCATTCTGTGGCTGGAAACGTCATTTGCACTCAACATCCGCGAACAGTTGATTATGAACGT
CAGCTTTTGTGGTGATAAAGCCGGTGCGACGCTGTTTCCAGCACATATCTACACCGATAACAACGGTGAATTAATGACGC
TGATGCAACGGGAAATGGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCC
GTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTATATCAATCCGCAGAAACAGGGAC
GCGTGTGGAATTATGA

Upstream 100 bases:

>100_bases
TCAGGGTTATGTGGTGTATGAAGGGCGTATCCGGGCAGAAGATCCTGCCCAGGCGTACCGTGATTCGTTGGCCTGGTTGC
GTACCTGCTAAGAGGTCTTT

Downstream 100 bases:

>100_bases
CCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATGGCGCAGGGGAAC
GGCTATCTTGGGCTTCGCGC

Product: putative dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MKSAMTSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASVWDDPQAMLLAVKPDVVSVGS
PNRFHYEHTLMALEAGCHVMCEKPPAMTTEQAWEMCDTARKLGKVLAYDFHHRFALDTQQLREQVTNGVLGEIYVTTARA
LRRCGVPGWGVFTNKELQGGGLLIDIGIHMLDAAMYVLGFPAVKSVNAHSFQKIGTQKSCGQFGEWDPATYSVEDSLFGT
IEFHNGGILWLETSFALNIREQLIMNVSFCGDKAGATLFPAHIYTDNNGELMTLMQREMADDNRHLRSMEAFINHVQGKP
VMIADAEQGYIIQQLVAALYQSAETGTRVEL

Sequences:

>Translated_351_residues
MKSAMTSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASVWDDPQAMLLAVKPDVVSVGS
PNRFHYEHTLMALEAGCHVMCEKPPAMTTEQAWEMCDTARKLGKVLAYDFHHRFALDTQQLREQVTNGVLGEIYVTTARA
LRRCGVPGWGVFTNKELQGGGLLIDIGIHMLDAAMYVLGFPAVKSVNAHSFQKIGTQKSCGQFGEWDPATYSVEDSLFGT
IEFHNGGILWLETSFALNIREQLIMNVSFCGDKAGATLFPAHIYTDNNGELMTLMQREMADDNRHLRSMEAFINHVQGKP
VMIADAEQGYIIQQLVAALYQSAETGTRVEL
>Mature_351_residues
MKSAMTSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASVWDDPQAMLLAVKPDVVSVGS
PNRFHYEHTLMALEAGCHVMCEKPPAMTTEQAWEMCDTARKLGKVLAYDFHHRFALDTQQLREQVTNGVLGEIYVTTARA
LRRCGVPGWGVFTNKELQGGGLLIDIGIHMLDAAMYVLGFPAVKSVNAHSFQKIGTQKSCGQFGEWDPATYSVEDSLFGT
IEFHNGGILWLETSFALNIREQLIMNVSFCGDKAGATLFPAHIYTDNNGELMTLMQREMADDNRHLRSMEAFINHVQGKP
VMIADAEQGYIIQQLVAALYQSAETGTRVEL

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=351, Percent_Identity=98.2905982905983, Blast_Score=720, Evalue=0.0,
Organism=Escherichia coli, GI87081947, Length=202, Percent_Identity=28.2178217821782, Blast_Score=79, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24581115, Length=158, Percent_Identity=32.9113924050633, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24581117, Length=193, Percent_Identity=28.4974093264249, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38701; Mature: 38701

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSAMTSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASV
CCCCCCCCCEEEEEEECCHHHHHHHHEEEEECCCCEEEEEHHHHHHHHHHHHHHCCCCCC
WDDPQAMLLAVKPDVVSVGSPNRFHYEHTLMALEAGCHVMCEKPPAMTTEQAWEMCDTAR
CCCCCEEEEEECCCEEECCCCCCEEHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHH
KLGKVLAYDFHHRFALDTQQLREQVTNGVLGEIYVTTARALRRCGVPGWGVFTNKELQGG
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEECCEECCC
GLLIDIGIHMLDAAMYVLGFPAVKSVNAHSFQKIGTQKSCGQFGEWDPATYSVEDSLFGT
CEEEEHHHHHHHHHHHHHCCCHHCCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEE
IEFHNGGILWLETSFALNIREQLIMNVSFCGDKAGATLFPAHIYTDNNGELMTLMQREMA
EEEECCCEEEEECCEEHHHHHHHHEEHEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHC
DDNRHLRSMEAFINHVQGKPVMIADAEQGYIIQQLVAALYQSAETGTRVEL
CCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEECC
>Mature Secondary Structure
MKSAMTSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASV
CCCCCCCCCEEEEEEECCHHHHHHHHEEEEECCCCEEEEEHHHHHHHHHHHHHHCCCCCC
WDDPQAMLLAVKPDVVSVGSPNRFHYEHTLMALEAGCHVMCEKPPAMTTEQAWEMCDTAR
CCCCCEEEEEECCCEEECCCCCCEEHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHH
KLGKVLAYDFHHRFALDTQQLREQVTNGVLGEIYVTTARALRRCGVPGWGVFTNKELQGG
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEECCEECCC
GLLIDIGIHMLDAAMYVLGFPAVKSVNAHSFQKIGTQKSCGQFGEWDPATYSVEDSLFGT
CEEEEHHHHHHHHHHHHHCCCHHCCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEE
IEFHNGGILWLETSFALNIREQLIMNVSFCGDKAGATLFPAHIYTDNNGELMTLMQREMA
EEEECCCEEEEECCEEHHHHHHHHEEHEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHC
DDNRHLRSMEAFINHVQGKPVMIADAEQGYIIQQLVAALYQSAETGTRVEL
CCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]