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The map label for this gene is yceB

Identifier: 30062601

GI number: 30062601

Start: 1113366

End: 1113926

Strand: Reverse

Name: yceB

Synonym: S1147

Alternate gene names: 30062601

Gene position: 1113926-1113366 (Counterclockwise)

Preceding gene: 30062602

Following gene: 30062600

Centisome position: 24.22

GC content: 46.88

Gene sequence:

>561_bases
ATGAACAAGTTTTTATTTGCCGCTGCATTGATCGTCAGTGGCCTGCTCGTTGGCTGTAATCAACTCACCCAATACACCAT
CACCGAACAAGAAATTAACCAGTCGCTTGCGAAACATAATAATTTCTCAAAAGATATCGGTTTACCCGGCGTGGCTGACG
CCCATATTGTTCTGACAAACTTGACCAGCCAAATTGGTCGCGAAGAGCCGAATAAGGTTACCCTAACCGGAGACGCCAAT
CTGGACATGAACTCCCTGTTCGGTAGTCAGAAAGCGACCATGAAACTGAAGCTGAAAGCGCTGCCCGTGTTTGATAAAGA
AAAAGGTGCGATCTTCCTGAAAGAGATGGAAGTGGTCGATGCGACGGTACAACCGGAAAAAATGCAAACGGTGATGCAAA
CGTTGCTTCCCTATTTGAACCAGGCATTACGCAATTACTTTAACCAGCAACCTGCTTACGTCCTGCGCGAAGATGGCAGT
CAGGGCGAAGCAATGGCGAAAAAACTGGCGAAAGGCATTGAAGTGAAGCCAGGCGAAATTGTCATTCCGTTTACGGATTA
A

Upstream 100 bases:

>100_bases
TTGCCGCCGTTTTCAGTTTTTTCTGCTGGCGAGTTTATCGCTGGTGACACATGCTGCGTTGTGTCAGGATATTGACGCAG
ATTTCATGTCGAGGACTACC

Downstream 100 bases:

>100_bases
TGACGAGGGCGCATTCGCGCCCTTTATTTTTCGTGCAAAGGAAAACGTTTCCGCTTATCCTTTGTGTCCGGCAAAAACAT
CCCTTCAGCCGGAGCATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSKDIGLPGVADAHIVLTNLTSQIGREEPNKVTLTGDAN
LDMNSLFGSQKATMKLKLKALPVFDKEKGAIFLKEMEVVDATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLREDGS
QGEAMAKKLAKGIEVKPGEIVIPFTD

Sequences:

>Translated_186_residues
MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSKDIGLPGVADAHIVLTNLTSQIGREEPNKVTLTGDAN
LDMNSLFGSQKATMKLKLKALPVFDKEKGAIFLKEMEVVDATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLREDGS
QGEAMAKKLAKGIEVKPGEIVIPFTD
>Mature_186_residues
MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSKDIGLPGVADAHIVLTNLTSQIGREEPNKVTLTGDAN
LDMNSLFGSQKATMKLKLKALPVFDKEKGAIFLKEMEVVDATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLREDGS
QGEAMAKKLAKGIEVKPGEIVIPFTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787302, Length=186, Percent_Identity=100, Blast_Score=380, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCEB_ECOLI (P0AB26)

Other databases:

- EMBL:   X04469
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   B25008
- RefSeq:   AP_001689.1
- RefSeq:   NP_415581.1
- PDB:   3L6I
- PDBsum:   3L6I
- ProteinModelPortal:   P0AB26
- SMR:   P0AB26
- STRING:   P0AB26
- SWISS-2DPAGE:   P0AB26
- EnsemblBacteria:   EBESCT00000003885
- EnsemblBacteria:   EBESCT00000017980
- GeneID:   947377
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW1050
- KEGG:   eco:b1063
- EchoBASE:   EB1107
- EcoGene:   EG11117
- eggNOG:   NOG05217
- GeneTree:   EBGT00050000011481
- HOGENOM:   HBG416339
- OMA:   NQALMAK
- ProtClustDB:   PRK10598
- BioCyc:   EcoCyc:EG11117-MONOMER
- Genevestigator:   P0AB26
- InterPro:   IPR010835

Pfam domain/function: PF07273 DUF1439

EC number: NA

Molecular weight: Translated: 20500; Mature: 20500

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSKDIGLPGVADAHIVLTN
CCHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
LTSQIGREEPNKVTLTGDANLDMNSLFGSQKATMKLKLKALPVFDKEKGAIFLKEMEVVD
HHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCEEEEEEEECCCEECCCCEEEEEHHHHHH
ATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLREDGSQGEAMAKKLAKGIEVKPGEI
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCE
VIPFTD
EEEECC
>Mature Secondary Structure
MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSKDIGLPGVADAHIVLTN
CCHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
LTSQIGREEPNKVTLTGDANLDMNSLFGSQKATMKLKLKALPVFDKEKGAIFLKEMEVVD
HHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCEEEEEEEECCCEECCCCEEEEEHHHHHH
ATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLREDGSQGEAMAKKLAKGIEVKPGEI
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCE
VIPFTD
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2876892; 8905232; 9278503