Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is 30062575
Identifier: 30062575
GI number: 30062575
Start: 1094152
End: 1095207
Strand: Reverse
Name: 30062575
Synonym: S1120
Alternate gene names: NA
Gene position: 1095207-1094152 (Counterclockwise)
Preceding gene: 30062576
Following gene: 30062572
Centisome position: 23.81
GC content: 53.41
Gene sequence:
>1056_bases ATGCTCCCCCGTTTTGCCGATATTTTTCAGCAGGGAAACCGCTGGCTTAACTGGCTGGAGAAACAACCGGAAGGGGCAGT CCGTCCGGTGGTAATTGAATCAGTGACAAAAATCATGGCCTGCGGGACCACACTGATGGGCTACACGCAGTGGTGTTGTT CATCACCGGACTGTTGCCATACAAAAAAGGTCTGCTTCCGGTGTAAAAGCCGCTCCTGCCCGCACTGCGGGGTGAAGGCT GGCGCACAGTGGATACAGTATCTGCTGAGCCTGGTCCCCTACTGCCCGTGGCAGCATATTGTGTTCACACTTCCCTGCCA GTACTGGTCCCTGGTGTTCCACAACCGGTGGTTACTGGCAGAGATGAGCCGCATTGCAGCGGATGTGATACTGGAAATCT GCCATCAGGCAGATGTGGAGCCGGGGATATTCACGGTGATCCACACATGGGGGCGTGACCAGCAGTGGCATCCGCATATC CATTTATCGACAACTGCCGGTGGTGTGACGTCGGGCCACACCTGGAAAAATCTTCATTTTTACGCCCGTAAGGTGATGAG CATGTGGCGCTACCGGATAACACGGTTGCTGTCACGGAAATACCCTTACCTGGTGATGCCGGATGCGCTGGCAGCAGAAG GAAGCAGTAAACGGGAATGGAATCGCTTCCTGGACACGCATTACCGCCGTGGCTGGAATGTCAACGTATCCCGGGTAATG GATAATGCCACCCATGTGGCGGTGTACTTTGGCTCTTACCTGAAAAAGCCACCGGTGCCGATGAGTCGTCTGGAGCATTA TGCCGGTCAGGATGAAATCGGTCTGCGTTACAACAGTCACCGAACAAAACGGGAAGAATACCTGTTGATGAGTGGAGATG AGTCCATGGAAAGGTTCTCCTGGCATGTGGCAGATAAGGGGTTCCGTATGGTGAGGTACTACGTTTTTTTAAGTCCGGCG AAACGGCGGTTACTGGAAGAAGTGGTGTACATCATAACGGAGACAGTGAGAAAAACGGCGATGCAAATCACCTGGAGAGG GATGTATCAGCAGTGA
Upstream 100 bases:
>100_bases GGGAATTTGCGACCATTCTTGCCGGTATCAGCGCCGGCGGTATGTACTGCCCGGAGTGTGGCACGGTTCACTGGCCGGAC GGAGTCGCCCCGCCCTTCTG
Downstream 100 bases:
>100_bases CTGAAGGTTGACCCGCTGAAGTGCAATCTGCGCGGAGGTCAGATGCGGTTTACGGGGCTGAAGAGGGGTTACCGTCTGGC AGAGCAGGTTATGATGCATG
Product: IS91 orf
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTTLMGYTQWCCSSPDCCHTKKVCFRCKSRSCPHCGVKA GAQWIQYLLSLVPYCPWQHIVFTLPCQYWSLVFHNRWLLAEMSRIAADVILEICHQADVEPGIFTVIHTWGRDQQWHPHI HLSTTAGGVTSGHTWKNLHFYARKVMSMWRYRITRLLSRKYPYLVMPDALAAEGSSKREWNRFLDTHYRRGWNVNVSRVM DNATHVAVYFGSYLKKPPVPMSRLEHYAGQDEIGLRYNSHRTKREEYLLMSGDESMERFSWHVADKGFRMVRYYVFLSPA KRRLLEEVVYIITETVRKTAMQITWRGMYQQ
Sequences:
>Translated_351_residues MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTTLMGYTQWCCSSPDCCHTKKVCFRCKSRSCPHCGVKA GAQWIQYLLSLVPYCPWQHIVFTLPCQYWSLVFHNRWLLAEMSRIAADVILEICHQADVEPGIFTVIHTWGRDQQWHPHI HLSTTAGGVTSGHTWKNLHFYARKVMSMWRYRITRLLSRKYPYLVMPDALAAEGSSKREWNRFLDTHYRRGWNVNVSRVM DNATHVAVYFGSYLKKPPVPMSRLEHYAGQDEIGLRYNSHRTKREEYLLMSGDESMERFSWHVADKGFRMVRYYVFLSPA KRRLLEEVVYIITETVRKTAMQITWRGMYQQ >Mature_351_residues MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTTLMGYTQWCCSSPDCCHTKKVCFRCKSRSCPHCGVKA GAQWIQYLLSLVPYCPWQHIVFTLPCQYWSLVFHNRWLLAEMSRIAADVILEICHQADVEPGIFTVIHTWGRDQQWHPHI HLSTTAGGVTSGHTWKNLHFYARKVMSMWRYRITRLLSRKYPYLVMPDALAAEGSSKREWNRFLDTHYRRGWNVNVSRVM DNATHVAVYFGSYLKKPPVPMSRLEHYAGQDEIGLRYNSHRTKREEYLLMSGDESMERFSWHVADKGFRMVRYYVFLSPA KRRLLEEVVYIITETVRKTAMQITWRGMYQQ
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007069 [H]
Pfam domain/function: PF04986 Transposase_32 [H]
EC number: NA
Molecular weight: Translated: 41313; Mature: 41313
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTTLMGYTQWCCSSPDCCH CCCHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH TKKVCFRCKSRSCPHCGVKAGAQWIQYLLSLVPYCPWQHIVFTLPCQYWSLVFHNRWLLA HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHEEECHHHHHHHHHCCHHHH EMSRIAADVILEICHQADVEPGIFTVIHTWGRDQQWHPHIHLSTTAGGVTSGHTWKNLHF HHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHH YARKVMSMWRYRITRLLSRKYPYLVMPDALAAEGSSKREWNRFLDTHYRRGWNVNVSRVM HHHHHHHHHHHHHHHHHHCCCCEEECCCHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHH DNATHVAVYFGSYLKKPPVPMSRLEHYAGQDEIGLRYNSHRTKREEYLLMSGDESMERFS CCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEECCCCCCCCCEEEECCCHHHHHHH WHVADKGFRMVRYYVFLSPAKRRLLEEVVYIITETVRKTAMQITWRGMYQQ HHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTTLMGYTQWCCSSPDCCH CCCHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH TKKVCFRCKSRSCPHCGVKAGAQWIQYLLSLVPYCPWQHIVFTLPCQYWSLVFHNRWLLA HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHEEECHHHHHHHHHCCHHHH EMSRIAADVILEICHQADVEPGIFTVIHTWGRDQQWHPHIHLSTTAGGVTSGHTWKNLHF HHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHH YARKVMSMWRYRITRLLSRKYPYLVMPDALAAEGSSKREWNRFLDTHYRRGWNVNVSRVM HHHHHHHHHHHHHHHHHHCCCCEEECCCHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHH DNATHVAVYFGSYLKKPPVPMSRLEHYAGQDEIGLRYNSHRTKREEYLLMSGDESMERFS CCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEECCCCCCCCCEEEECCCHHHHHHH WHVADKGFRMVRYYVFLSPAKRRLLEEVVYIITETVRKTAMQITWRGMYQQ HHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1646375 [H]