Click here to switch to the map view.

The map label for this gene is csgF

Identifier: 30062562

GI number: 30062562

Start: 1080763

End: 1081179

Strand: Reverse

Name: csgF

Synonym: S1105

Alternate gene names: 30062562

Gene position: 1081179-1080763 (Counterclockwise)

Preceding gene: 30062563

Following gene: 30062557

Centisome position: 23.51

GC content: 41.97

Gene sequence:

>417_bases
ATGCGTGTCAAACATGCAGTAGTTCTACTCATGCTTATTTCGCCATTAAGTTGGGCTGGAACCATGACTTTCCAGTTCCG
TAATCCAAACTTTGGTGGTAACCCAAATAATGGCGCTTTTTTATTAAATAGCGCTCAGGCCCAAAACTCTTATAAAGATC
CGAGCTATAACGATGACTTTGGTATTGAAACACCCTCAGCGTTAGATAACTTTACTCAGGCCATCCAGTCACAAATTTTA
GGTGGGCTACTGTCGAATATTAATACCGGTAAACCGGGCCGCATGGTGACCAACGATTATATTGTTGATATTGCTAACCG
CGATGGTCAATTGCAGTTGAACGTGACAGATCGTAAAACCGGACAAACCTCGACCATCCAGGTTTCGGGTTTACAAAATA
ACTCAACCGATTTTTAA

Upstream 100 bases:

>100_bases
TGAAGAAGCACTAAATCGTCGCCAGATAAATCAGGCGTTATTAAGTACGGACGATTTGGCGCATGATGAATTCTAAATAA
AAAATTGTTCGGAGGCTGCA

Downstream 100 bases:

>100_bases
GCCCCAGCTTCATAAGGAAAATAATCATGCAGCGCTTATTTCTTTTGGTTGCCGTCATGTTACTGAGCGGATGCTTAACC
GCCCCGCCTAAAGAAGCCGC

Product: curli assembly protein CsgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MRVKHAVVLLMLISPLSWAGTMTFQFRNPNFGGNPNNGAFLLNSAQAQNSYKDPSYNDDFGIETPSALDNFTQAIQSQIL
GGLLSNINTGKPGRMVTNDYIVDIANRDGQLQLNVTDRKTGQTSTIQVSGLQNNSTDF

Sequences:

>Translated_138_residues
MRVKHAVVLLMLISPLSWAGTMTFQFRNPNFGGNPNNGAFLLNSAQAQNSYKDPSYNDDFGIETPSALDNFTQAIQSQIL
GGLLSNINTGKPGRMVTNDYIVDIANRDGQLQLNVTDRKTGQTSTIQVSGLQNNSTDF
>Mature_138_residues
MRVKHAVVLLMLISPLSWAGTMTFQFRNPNFGGNPNNGAFLLNSAQAQNSYKDPSYNDDFGIETPSALDNFTQAIQSQIL
GGLLSNINTGKPGRMVTNDYIVDIANRDGQLQLNVTDRKTGQTSTIQVSGLQNNSTDF

Specific function: May be involved in the biogenesis of curli organelles

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787275, Length=138, Percent_Identity=100, Blast_Score=280, Evalue=2e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CSGF_ECO57 (P0AEA0)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   G90805
- RefSeq:   NP_287172.1
- RefSeq:   NP_309442.1
- ProteinModelPortal:   P0AEA0
- EnsemblBacteria:   EBESCT00000028739
- EnsemblBacteria:   EBESCT00000059196
- GeneID:   913765
- GeneID:   959366
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z1671
- KEGG:   ecs:ECs1415
- GeneTree:   EBGT00050000011380
- HOGENOM:   HBG660516
- OMA:   PVNPNFG
- ProtClustDB:   PRK10050
- BioCyc:   ECOL83334:ECS1415-MONOMER
- InterPro:   IPR018893

Pfam domain/function: PF10614 Tafi-CsgF

EC number: NA

Molecular weight: Translated: 15056; Mature: 15056

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVKHAVVLLMLISPLSWAGTMTFQFRNPNFGGNPNNGAFLLNSAQAQNSYKDPSYNDDF
CCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
GIETPSALDNFTQAIQSQILGGLLSNINTGKPGRMVTNDYIVDIANRDGQLQLNVTDRKT
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCEEEEEECCCCEEEEEECCCCC
GQTSTIQVSGLQNNSTDF
CCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MRVKHAVVLLMLISPLSWAGTMTFQFRNPNFGGNPNNGAFLLNSAQAQNSYKDPSYNDDF
CCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
GIETPSALDNFTQAIQSQILGGLLSNINTGKPGRMVTNDYIVDIANRDGQLQLNVTDRKT
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCEEEEEECCCCEEEEEECCCCC
GQTSTIQVSGLQNNSTDF
CCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796