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The map label for this gene is ybjN

Identifier: 30062335

GI number: 30062335

Start: 834530

End: 835006

Strand: Direct

Name: ybjN

Synonym: S0849

Alternate gene names: 30062335

Gene position: 834530-835006 (Clockwise)

Preceding gene: 30062334

Following gene: 30062336

Centisome position: 18.14

GC content: 48.43

Gene sequence:

>477_bases
ATGACATCGCTGGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGATGACCTGGGGATGAGTTTTTTTGAATGTGA
TAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATCTGATCGATAACA
CGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGATTTATCTGCCATCAATGCC
AGTTCGCTGACCGTGAAAGCATTTCTTGATATGCAGGATGATAATCTGCCAAAGCTGGTGGTTTGCCAGTCTTTATCCGT
TATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAG
CTAATGCCCATCAACTGCTGTTACCGACTGACGATGAAGGGCAAAACAACGTTACCGAAAACTATTTTCTCCACTGA

Upstream 100 bases:

>100_bases
AACGGGTGGTTAGTCGCAATCACATTACTGATCATGGTTTTGCCTGCGCTTTTTGCGTAAGCTGTGCCGGTCTTTTTATC
GAAAGAGGTTGTACAAAATT

Downstream 100 bases:

>100_bases
TAATTCCTTTCGAGCACGCAGTCGCTGCCGCAGTGACTGCGCGCTGCAAAATTATCTGCTGTTTTTAACCTTTTCTTAAA
GATTATTTCACTTCTCTTGT

Product: putative sensory transduction regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINA
SSLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH

Sequences:

>Translated_158_residues
MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINA
SSLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH
>Mature_157_residues
TSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINAS
SLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787077, Length=158, Percent_Identity=100, Blast_Score=325, Evalue=1e-90,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): YBJN_ECO57 (P0AAY8)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   E90745
- RefSeq:   NP_286619.1
- RefSeq:   NP_308960.1
- ProteinModelPortal:   P0AAY8
- EnsemblBacteria:   EBESCT00000026491
- EnsemblBacteria:   EBESCT00000056352
- GeneID:   917677
- GeneID:   958210
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z1080
- KEGG:   ecs:ECs0933
- GeneTree:   EBGT00050000011540
- HOGENOM:   HBG416422
- OMA:   YFECDSC
- ProtClustDB:   CLSK879793
- BioCyc:   ECOL83334:ECS0933-MONOMER
- InterPro:   IPR019660

Pfam domain/function: PF10722 YbjN

EC number: NA

Molecular weight: Translated: 17666; Mature: 17535

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAM
CCCEECCCHHHHHHHHHHHCCCEEECCCCCEECCCCCCCCCCEEECEEEHHHHHHHHHHH
AEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFAWFV
HHCCCCEECCHHHCHHHCCCCCEEEEEEEECCCCCCCEEEEHHHHHHHHCCCHHHHHHHH
RQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH
HCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCEECC
>Mature Secondary Structure 
TSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAM
CCEECCCHHHHHHHHHHHCCCEEECCCCCEECCCCCCCCCCEEECEEEHHHHHHHHHHH
AEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFAWFV
HHCCCCEECCHHHCHHHCCCCCEEEEEEEECCCCCCCEEEEHHHHHHHHCCCHHHHHHHH
RQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH
HCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796