Definition | Shigella flexneri 2a str. 2457T, complete genome. |
---|---|
Accession | NC_004741 |
Length | 4,599,354 |
Click here to switch to the map view.
The map label for this gene is 30062246
Identifier: 30062246
GI number: 30062246
Start: 731585
End: 731971
Strand: Direct
Name: 30062246
Synonym: S0749
Alternate gene names: NA
Gene position: 731585-731971 (Clockwise)
Preceding gene: 30062245
Following gene: 30062247
Centisome position: 15.91
GC content: 52.2
Gene sequence:
>387_bases ATGTTTCTGAAACAGGATACGTTTAATTATGAAAAACAGTCCGTGGTGCTCAGTGAGCTGTCCGGGCTGCAGAGAATTGA ATATCTGACGTTTGTTCAGCAGCGAACGGCAAAGTTTGATGCACAGGAGGGAGAACTGCCGGAGGCTGAACGACAGATTG CTTTTCTGCGTATGGGAATGGATATCAATGCCTGGCTGGTTTCCCGCTCACTGTGGAATGCTGAGCAGTCTCAGGATGTT GAGACGCTTTGCGCATCCATTATGACAACATGGTCGTATGATGCGCTGGGCGCGGGGGCGGAGAGGGTTCTGTCGCTGAG CGGTATGGGGACCATTGAGAATGCCGGGGATGATGATCATGAGGCGCTGACGCCGGAAAAGTCCTGA
Upstream 100 bases:
>100_bases GAGTTTGTGGCAGTGGCTGCGGTGACCGTCAGCGCACCATAACAGGACGATACTCATCATTGCCCCGGTTATCCGGGGCT TTTTGCATCCGGAGAACATG
Downstream 100 bases:
>100_bases CGCGGGAAATGCAGTTTGTCATGCGGCTTGCCCGGGAGTTCCGGCGGGCAGACTGGCGGCGGATGCTGTCGGATATGTCG GCCACTGAGCTTGGTGAGTG
Product: putative tail component of prophage CP-933K
Products: NA
Alternate protein names: Gifsy-1 Prophage Minor Tail Protein; Phage Minor Tail Protein G; Minor Tail Component Of Putative Prophage
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MFLKQDTFNYEKQSVVLSELSGLQRIEYLTFVQQRTAKFDAQEGELPEAERQIAFLRMGMDINAWLVSRSLWNAEQSQDV ETLCASIMTTWSYDALGAGAERVLSLSGMGTIENAGDDDHEALTPEKS
Sequences:
>Translated_128_residues MFLKQDTFNYEKQSVVLSELSGLQRIEYLTFVQQRTAKFDAQEGELPEAERQIAFLRMGMDINAWLVSRSLWNAEQSQDV ETLCASIMTTWSYDALGAGAERVLSLSGMGTIENAGDDDHEALTPEKS >Mature_128_residues MFLKQDTFNYEKQSVVLSELSGLQRIEYLTFVQQRTAKFDAQEGELPEAERQIAFLRMGMDINAWLVSRSLWNAEQSQDV ETLCASIMTTWSYDALGAGAERVLSLSGMGTIENAGDDDHEALTPEKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14372; Mature: 14372
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLKQDTFNYEKQSVVLSELSGLQRIEYLTFVQQRTAKFDAQEGELPEAERQIAFLRMGM CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC DINAWLVSRSLWNAEQSQDVETLCASIMTTWSYDALGAGAERVLSLSGMGTIENAGDDDH CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHCCCHHHHHHHCCCCCCCCCCCCCC EALTPEKS CCCCCCCC >Mature Secondary Structure MFLKQDTFNYEKQSVVLSELSGLQRIEYLTFVQQRTAKFDAQEGELPEAERQIAFLRMGM CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC DINAWLVSRSLWNAEQSQDVETLCASIMTTWSYDALGAGAERVLSLSGMGTIENAGDDDH CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHCCCHHHHHHHCCCCCCCCCCCCCC EALTPEKS CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA