| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is ccrB
Identifier: 30062186
GI number: 30062186
Start: 688816
End: 689199
Strand: Direct
Name: ccrB
Synonym: S0679
Alternate gene names: 30062186
Gene position: 688816-689199 (Clockwise)
Preceding gene: 30062183
Following gene: 30062189
Centisome position: 14.98
GC content: 48.96
Gene sequence:
>384_bases GTGTTACAACTTCTTTTAGCAGTTTTTATTGGCGGTGGTACGGGAAGCGTAGCGAGATGGCTGTTAAGTATGCGATTTAA CCCGCTGCATCAGGCGATTCCGTTGGGGACGCTGGCAGCAAACCTGATTGGGGCATTCATCATAGGAATGGGATTCGCCT GGTTCAGCAGGATGACGAACATTGATCCAGTGTGGAAAGTATTAATCACCACCGGATTTTGTGGCGGTCTAACAACCTTC TCAACATTTTCGGCAGAAGTGGTGTTTTTGTTACAAGAGGGCCGCTTTGGCTGGGCATTACTGAACGTTTTCGTCAACCT TCTGGGGTCTTTTGCCATGACCGCACTGGCATTCTGGCTGTTTTCGGCCTCAACCGTACACTAA
Upstream 100 bases:
>100_bases ACCAGCATTGCCACCTCCTGTCAGAGTCGTAAAATTCGCCAACGACGATTATTCGGCGTTACACTTATCACTCATACAAA TCAAATAGCAGGATTTTGCA
Downstream 100 bases:
>100_bases AGACCAAAAAAAACCCGCTGATTAAGCGGGTTTTGAATTCTTGCTGACGTATCTTACAGAGCGATTACGTTTGCAGCAGA AGGGCCTTTGGCACCGTTAG
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MLQLLLAVFIGGGTGSVARWLLSMRFNPLHQAIPLGTLAANLIGAFIIGMGFAWFSRMTNIDPVWKVLITTGFCGGLTTF STFSAEVVFLLQEGRFGWALLNVFVNLLGSFAMTALAFWLFSASTVH
Sequences:
>Translated_127_residues MLQLLLAVFIGGGTGSVARWLLSMRFNPLHQAIPLGTLAANLIGAFIIGMGFAWFSRMTNIDPVWKVLITTGFCGGLTTF STFSAEVVFLLQEGRFGWALLNVFVNLLGSFAMTALAFWLFSASTVH >Mature_127_residues MLQLLLAVFIGGGTGSVARWLLSMRFNPLHQAIPLGTLAANLIGAFIIGMGFAWFSRMTNIDPVWKVLITTGFCGGLTTF STFSAEVVFLLQEGRFGWALLNVFVNLLGSFAMTALAFWLFSASTVH
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
Organism=Escherichia coli, GI1786842, Length=127, Percent_Identity=97.6377952755905, Blast_Score=243, Evalue=4e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 13794; Mature: 13794
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQLLLAVFIGGGTGSVARWLLSMRFNPLHQAIPLGTLAANLIGAFIIGMGFAWFSRMTN CHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC IDPVWKVLITTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLNVFVNLLGSFAMTALAFWL CCHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH FSASTVH HHHCCCC >Mature Secondary Structure MLQLLLAVFIGGGTGSVARWLLSMRFNPLHQAIPLGTLAANLIGAFIIGMGFAWFSRMTN CHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC IDPVWKVLITTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLNVFVNLLGSFAMTALAFWL CCHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH FSASTVH HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA