| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is ybeV
Identifier: 30062162
GI number: 30062162
Start: 665089
End: 666540
Strand: Reverse
Name: ybeV
Synonym: S0654
Alternate gene names: 30062162
Gene position: 666540-665089 (Counterclockwise)
Preceding gene: 30062163
Following gene: 30062151
Centisome position: 14.49
GC content: 47.52
Gene sequence:
>1452_bases ATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATCCGCCAGGCTTATCTTGCTCGCTT ACCGTTGTGTCATCCCGAAACCGATCCGCAGGGGTTTAAAGCATTACGCCAGGCCTATGAAGAGGCGCTGCGACTGGCGG TAAATCCTGTCGAGGAAGCAGATGATGAAGAAAAAGATGCCACCGCTGAACATGAAATACTACGTGCATTCAGGACATTA CTGGATTCAGAAAGTGATCGTTTTCAGCCCTCCGCCTGGCAGAAATTTATTCAGCAATTAAATACCTGGAACATGGAGGA TGTCGATCAATTACGCTGGCCGCTGTGTGCAATCGCTATAGAAGCGCGATATCTGTCATTAAATTGTGCTTCTTTGTTGG CAGAGCGTTTGAACTGGCATTCGTTTAATGACAGCGAAGGAATGGATGAGGAAGAAAGGGAGGCTTTTCTTGAGGCCATT CAGGCTGGTGATTGTTTCGATTTCCTTAGCCTTCTGGAATATCCCGTCGCGTTACAGAACCAGACTGTTGAATATTACTT CGCGCTGGAACGTTGCTGCCGTTACCATCCTGACTATGTCACTGCGTTTTTGGCGATGGAAGGACCGTGGTTCATTCCTG ATGATGCAAAGTTACATCGCAAACTGTTGCGCTGGTACAGCTCGGTGCAAACAGGTATGGTGGAACTCATTCCTGTAGCC AAACAGTGGCAAGCGGAAGAACCAGAAAGCGAAGATGCCCGGTATTACCAGTGTGCACAACGTTTGTACTGCGGCGAGGG GGAAAGCCTGCTTGCTGATCTCGGCGCGTACTGGGAAAGTTACCCATCTACACAAGCTGATAATTTGTTGTTGCAGTGGA GCAAGCGTCATTGCCCGGATTATTTCGCGTTATTAGTGATGGTTATCGAAGCGCGGAGCATGGTAGATGCGCAAGGTCAA CCGCTGAAATATGTTCCTGGTGAGAGCGCCCGGACGCGGCTGTTATGGGCGGAAATTTTACATAGCGGAAAATTATCGCC GTTAGGTCAATCGTTTATTGAGTCGTTATTCTTCAAACGCAAAGCATGGGCGTGGTGGAAATCGAGAGTCGGTAGCGAGA CAGAAGAAGATTCACCGTTACTGGATTTGTATCGGGTAGCGGAACAGGTAGTACTTGAAGCGTTTCCGAAACAAGAGATG CTGGCCCGTCTTAATACAAGGCTGGAAGGCGGAGATGCTCATCCATTAGAGGCCATTATCACCCGGATGCTGTTGACGAA AGTAAAACTCGAGCCGGAGGATGAAGATGTCGATGAGCCAACACCTGAAAACCATGAAGAAAAAAATGATGAGGGTGAAA AACCACAGAGCATTACCAGCATTATCAAAATCAGTTTAACGGTGCTGGTTATAGGTTATGCTCTCGGCAAAATCGCGATG TTGTTTAGTTGA
Upstream 100 bases:
>100_bases AGCTGGCAGCGGGAAGCGACCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGCCTGAATGCCCGGTAACG CTTAAGGATGTGAGCGACCT
Downstream 100 bases:
>100_bases CGATGTGTTTTTTGCGCCGATGCCGGATGCAGCATTTACGCCGCATCCGGCAGCCGTGATTATGAGGTCTCAATGGCTAA ATAAACGCTCGCCCGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MKTCWQILEIESTTQIDIIRQAYLARLPLCHPETDPQGFKALRQAYEEALRLAVNPVEEADDEEKDATAEHEILRAFRTL LDSESDRFQPSAWQKFIQQLNTWNMEDVDQLRWPLCAIAIEARYLSLNCASLLAERLNWHSFNDSEGMDEEEREAFLEAI QAGDCFDFLSLLEYPVALQNQTVEYYFALERCCRYHPDYVTAFLAMEGPWFIPDDAKLHRKLLRWYSSVQTGMVELIPVA KQWQAEEPESEDARYYQCAQRLYCGEGESLLADLGAYWESYPSTQADNLLLQWSKRHCPDYFALLVMVIEARSMVDAQGQ PLKYVPGESARTRLLWAEILHSGKLSPLGQSFIESLFFKRKAWAWWKSRVGSETEEDSPLLDLYRVAEQVVLEAFPKQEM LARLNTRLEGGDAHPLEAIITRMLLTKVKLEPEDEDVDEPTPENHEEKNDEGEKPQSITSIIKISLTVLVIGYALGKIAM LFS
Sequences:
>Translated_483_residues MKTCWQILEIESTTQIDIIRQAYLARLPLCHPETDPQGFKALRQAYEEALRLAVNPVEEADDEEKDATAEHEILRAFRTL LDSESDRFQPSAWQKFIQQLNTWNMEDVDQLRWPLCAIAIEARYLSLNCASLLAERLNWHSFNDSEGMDEEEREAFLEAI QAGDCFDFLSLLEYPVALQNQTVEYYFALERCCRYHPDYVTAFLAMEGPWFIPDDAKLHRKLLRWYSSVQTGMVELIPVA KQWQAEEPESEDARYYQCAQRLYCGEGESLLADLGAYWESYPSTQADNLLLQWSKRHCPDYFALLVMVIEARSMVDAQGQ PLKYVPGESARTRLLWAEILHSGKLSPLGQSFIESLFFKRKAWAWWKSRVGSETEEDSPLLDLYRVAEQVVLEAFPKQEM LARLNTRLEGGDAHPLEAIITRMLLTKVKLEPEDEDVDEPTPENHEEKNDEGEKPQSITSIIKISLTVLVIGYALGKIAM LFS >Mature_483_residues MKTCWQILEIESTTQIDIIRQAYLARLPLCHPETDPQGFKALRQAYEEALRLAVNPVEEADDEEKDATAEHEILRAFRTL LDSESDRFQPSAWQKFIQQLNTWNMEDVDQLRWPLCAIAIEARYLSLNCASLLAERLNWHSFNDSEGMDEEEREAFLEAI QAGDCFDFLSLLEYPVALQNQTVEYYFALERCCRYHPDYVTAFLAMEGPWFIPDDAKLHRKLLRWYSSVQTGMVELIPVA KQWQAEEPESEDARYYQCAQRLYCGEGESLLADLGAYWESYPSTQADNLLLQWSKRHCPDYFALLVMVIEARSMVDAQGQ PLKYVPGESARTRLLWAEILHSGKLSPLGQSFIESLFFKRKAWAWWKSRVGSETEEDSPLLDLYRVAEQVVLEAFPKQEM LARLNTRLEGGDAHPLEAIITRMLLTKVKLEPEDEDVDEPTPENHEEKNDEGEKPQSITSIIKISLTVLVIGYALGKIAM LFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain [H]
Homologues:
Organism=Escherichia coli, GI1786869, Length=483, Percent_Identity=97.7225672877847, Blast_Score=975, Evalue=0.0, Organism=Escherichia coli, GI1786866, Length=483, Percent_Identity=49.4824016563147, Blast_Score=438, Evalue=1e-124,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001623 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55681; Mature: 55681
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTCWQILEIESTTQIDIIRQAYLARLPLCHPETDPQGFKALRQAYEEALRLAVNPVEEA CCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHC DDEEKDATAEHEILRAFRTLLDSESDRFQPSAWQKFIQQLNTWNMEDVDQLRWPLCAIAI CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH EARYLSLNCASLLAERLNWHSFNDSEGMDEEEREAFLEAIQAGDCFDFLSLLEYPVALQN HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHCC QTVEYYFALERCCRYHPDYVTAFLAMEGPWFIPDDAKLHRKLLRWYSSVQTGMVELIPVA CHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHH KQWQAEEPESEDARYYQCAQRLYCGEGESLLADLGAYWESYPSTQADNLLLQWSKRHCPD HHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHH YFALLVMVIEARSMVDAQGQPLKYVPGESARTRLLWAEILHSGKLSPLGQSFIESLFFKR HHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH KAWAWWKSRVGSETEEDSPLLDLYRVAEQVVLEAFPKQEMLARLNTRLEGGDAHPLEAII HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHH TRMLLTKVKLEPEDEDVDEPTPENHEEKNDEGEKPQSITSIIKISLTVLVIGYALGKIAM HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LFS HCC >Mature Secondary Structure MKTCWQILEIESTTQIDIIRQAYLARLPLCHPETDPQGFKALRQAYEEALRLAVNPVEEA CCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHC DDEEKDATAEHEILRAFRTLLDSESDRFQPSAWQKFIQQLNTWNMEDVDQLRWPLCAIAI CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH EARYLSLNCASLLAERLNWHSFNDSEGMDEEEREAFLEAIQAGDCFDFLSLLEYPVALQN HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHCC QTVEYYFALERCCRYHPDYVTAFLAMEGPWFIPDDAKLHRKLLRWYSSVQTGMVELIPVA CHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHH KQWQAEEPESEDARYYQCAQRLYCGEGESLLADLGAYWESYPSTQADNLLLQWSKRHCPD HHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHH YFALLVMVIEARSMVDAQGQPLKYVPGESARTRLLWAEILHSGKLSPLGQSFIESLFFKR HHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH KAWAWWKSRVGSETEEDSPLLDLYRVAEQVVLEAFPKQEMLARLNTRLEGGDAHPLEAII HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHH TRMLLTKVKLEPEDEDVDEPTPENHEEKNDEGEKPQSITSIIKISLTVLVIGYALGKIAM HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LFS HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]