Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is 30061785
Identifier: 30061785
GI number: 30061785
Start: 240390
End: 240797
Strand: Reverse
Name: 30061785
Synonym: S0233
Alternate gene names: NA
Gene position: 240797-240390 (Counterclockwise)
Preceding gene: 30061786
Following gene: 30061783
Centisome position: 5.24
GC content: 47.3
Gene sequence:
>408_bases TTGACCACTTCAAATACACTGAGCGATTACGCTGTATTGGTCCCTGAGAGACTTGAGGCAATCTTGGACCGAGCCGCTCA ACGCGCAGGTCATGAGGATATTAGTGAGCTATTGGGCTGCACTGTATGCAGCTATGCGGGCGATGATACAGGTATCTATC TCCTGCCTAAGCGGTTCGCTTCTATCTCTTTCAGGTCAACTAAAGACGCTAAGACGGTAGATGTCAAAGTGACCCGAAAT AGTAACACTGCTGGGTATGACCTTGAGTTAATCAGTGTGGTCGATGTGTTGGCTACTGGTTCCGTTAAGGTGAAAGCAGG TGAGTTTGACGTTGAGAAAGACGCCTCTTTCCCGTTGATACATGTTATTCGGTTTACTACCCCCAGAGTAACTATAAACC CTGAGTGA
Upstream 100 bases:
>100_bases ATTACAGTGCACTAAGACCGCACGAATATAACGGTGGGTTACCCCCAAACGAATCGGAAAATCGATACTGGAAAAACTCT AACTCGGTGGCCAGTTTTTG
Downstream 100 bases:
>100_bases ACATAAGGAGTACATCCATGAGCTTACAGGAGTTGTTTGAGCTCGTCCTCTGTGTCCACTTGGTCTGCCAGATGCTCTAC AGGGAGTGATAGATAATAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTTSNTLSDYAVLVPERLEAILDRAAQRAGHEDISELLGCTVCSYAGDDTGIYLLPKRFASISFRSTKDAKTVDVKVTRN SNTAGYDLELISVVDVLATGSVKVKAGEFDVEKDASFPLIHVIRFTTPRVTINPE
Sequences:
>Translated_135_residues MTTSNTLSDYAVLVPERLEAILDRAAQRAGHEDISELLGCTVCSYAGDDTGIYLLPKRFASISFRSTKDAKTVDVKVTRN SNTAGYDLELISVVDVLATGSVKVKAGEFDVEKDASFPLIHVIRFTTPRVTINPE >Mature_134_residues TTSNTLSDYAVLVPERLEAILDRAAQRAGHEDISELLGCTVCSYAGDDTGIYLLPKRFASISFRSTKDAKTVDVKVTRNS NTAGYDLELISVVDVLATGSVKVKAGEFDVEKDASFPLIHVIRFTTPRVTINPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14710; Mature: 14579
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSNTLSDYAVLVPERLEAILDRAAQRAGHEDISELLGCTVCSYAGDDTGIYLLPKRFA CCCCCCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCC SISFRSTKDAKTVDVKVTRNSNTAGYDLELISVVDVLATGSVKVKAGEFDVEKDASFPLI EEEECCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEE HVIRFTTPRVTINPE EEEEECCCEEEECCC >Mature Secondary Structure TTSNTLSDYAVLVPERLEAILDRAAQRAGHEDISELLGCTVCSYAGDDTGIYLLPKRFA CCCCCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCC SISFRSTKDAKTVDVKVTRNSNTAGYDLELISVVDVLATGSVKVKAGEFDVEKDASFPLI EEEECCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEE HVIRFTTPRVTINPE EEEEECCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA