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The map label for this gene is yaeB

Identifier: 30061752

GI number: 30061752

Start: 209271

End: 209978

Strand: Reverse

Name: yaeB

Synonym: S0188

Alternate gene names: 30061752

Gene position: 209978-209271 (Counterclockwise)

Preceding gene: 30061753

Following gene: 30061751

Centisome position: 4.57

GC content: 54.94

Gene sequence:

>708_bases
ATGAGCAGTTTCCAGTTCGAGCAAATAGGCGTTATTCGCTCGCCCTATAAAGAAAAATTCGCCGTTCCGCGCCAGCCAGG
TCTGGTAAAAAGCGCCAACGGCGAACTGCATCTCATAGCTTCCTACAACCAGGCCGACGCCGTTCGCGGCCTGGAAGCAT
TCAGCCATTTATGGATCCTTTTCGTCTTTCATCAAACGATGGAAGGCGGCTGGCGTCCGACTGTGCGTCCACCGCGCCTC
GGCGGTAACGCCAGAATGGGGGTTTTCGCAACACGCTCTACTTTCCGCCCTAACCCAATTGGCATGTCGCTGGTAGAGCT
GAAAGAGGTTGTTTGCCATAAAGGCAGCGTGATTCTGAAGCTCGGCAGTCTGGATCTGGTCGATGGTACGCCGGTAGTGG
ATATCAAACCGTATCTCCCCTTTGCCGAATCGCTTCCCGATGCCAGTGCCAGCTATGCGCAAAGTGCGCCAGCTGCAGAG
ATGGCGGTGAGTTTTACCGCAGAGGTCGAAAAGCAGCTTTTGACGCTGGAGAAGCGTTATCCGCAGTTAACGCTGTTTAT
CCGCGAAGTACTGGCGCAGGACCCGCGCCCGGCCTATCGTAAAGGTGAGGAAACGGGCAAAACCTATGCCGTCTGGCTAC
ATGATTTTAACGTTCGCTGGCGCGTCACCGACGCAGGTTTTGAAGTCTTTGCGCTGGAACCGCGTTAA

Upstream 100 bases:

>100_bases
CCAATGCTGTATTACTGCATAGCTGCGAAGTCACCAGCGGTACGCCGGGCTGCTATCGTCAGGCTGTATGTATCGGCTCT
GCGCTTAACATTACGGCGAA

Downstream 100 bases:

>100_bases
ATTCACGCCCTTCTCTTTTGACATTTCTTTTGCACTGGTAAACTAAATCACTTTTTTTGTCCCAGGCTCGCCTTGAGCCT
GTTCTACCTTCCAACTGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIASYNQADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRL
GGNARMGVFATRSTFRPNPIGMSLVELKEVVCHKGSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAE
MAVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQDPRPAYRKGEETGKTYAVWLHDFNVRWRVTDAGFEVFALEPR

Sequences:

>Translated_235_residues
MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIASYNQADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRL
GGNARMGVFATRSTFRPNPIGMSLVELKEVVCHKGSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAE
MAVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQDPRPAYRKGEETGKTYAVWLHDFNVRWRVTDAGFEVFALEPR
>Mature_234_residues
SSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIASYNQADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRLG
GNARMGVFATRSTFRPNPIGMSLVELKEVVCHKGSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAEM
AVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQDPRPAYRKGEETGKTYAVWLHDFNVRWRVTDAGFEVFALEPR

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=135, Percent_Identity=42.2222222222222, Blast_Score=107, Evalue=1e-23,
Organism=Escherichia coli, GI1786393, Length=235, Percent_Identity=99.1489361702128, Blast_Score=479, Evalue=1e-137,
Organism=Drosophila melanogaster, GI24586408, Length=163, Percent_Identity=42.3312883435583, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI45552503, Length=142, Percent_Identity=45.0704225352113, Blast_Score=110, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 26295; Mature: 26163

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS01318 UPF0066

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIASYNQADAVRGLEAFSHLWIL
CCCCCCHHHCCCCCCHHHHCCCCCCCCCEEECCCCEEEEEECCHHHHHHHHHHHHHHHHH
FVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGMSLVELKEVVCHKGSVILK
HHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEE
LGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAEMAVSFTAEVEKQLLTLEKRY
ECCEEEECCCCEEEECCCCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
PQLTLFIREVLAQDPRPAYRKGEETGKTYAVWLHDFNVRWRVTDAGFEVFALEPR
CHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEEEECCEEEEEECCCEEEEEECCC
>Mature Secondary Structure 
SSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIASYNQADAVRGLEAFSHLWIL
CCCCCHHHCCCCCCHHHHCCCCCCCCCEEECCCCEEEEEECCHHHHHHHHHHHHHHHHH
FVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGMSLVELKEVVCHKGSVILK
HHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEE
LGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAEMAVSFTAEVEKQLLTLEKRY
ECCEEEECCCCEEEECCCCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
PQLTLFIREVLAQDPRPAYRKGEETGKTYAVWLHDFNVRWRVTDAGFEVFALEPR
CHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEEEECCEEEEEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1459951; 9278503 [H]