Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is aroP
Identifier: 30061678
GI number: 30061678
Start: 117929
End: 119302
Strand: Reverse
Name: aroP
Synonym: S0111
Alternate gene names: 30061678
Gene position: 119302-117929 (Counterclockwise)
Preceding gene: 30061685
Following gene: 30061675
Centisome position: 2.59
GC content: 52.69
Gene sequence:
>1374_bases ATGATGGAAGGTCAACAGCACGGCGAGCAGCTAAAGCGCGGCCTTAAAAACCGCCATATTCAGCTTATCGCGCTGGGTGG CGCGATAGGGACAGGGCTATTCCTAGGTAGCGCCTCCGTAATACAGTCCGCAGGGCCAGGGATTATCCTGGGTTACGCCA TTGCTGGTTTTATCGCCTTTCTGATCATGCGTCAGCTGGGTGAAATGGTGGTCGAAGAACCTGTCGCAGGCTCCTTTAGC CACTTTGCTTATAAATACTGGGGCAGTTTTGCCGGTTTCGCCTCTGGCTGGAACTACTGGGTACTGTACGTTTTAGTTGC CATGGCAGAGCTGACTGCCGTGGGTAAATACATTCAGTTCTGGTATCCGGAAATCCCAACCTGGGTTTCTGCCGCCGTAT TCTTTGTGGTGATTAACGCCATCAACCTGACCAACGTTAAAGTGTTTGGCGAGATGGAGTTCTGGTTTGCCATTATCAAA GTTATTGCGGTAGTAGCGATGATCATCTTCGGCGGCTGGCTGCTGTTCAGTGGCAACGGCGGCCCGCAGGCGAGCGTTAG CAACCTGTGGGATCAAGGTGGTTTCCTGCCGCACGGCTTCACCGGACTGGTGATGATGATGGCGATTATCATGTTCTCGT TCGGTGGTCTGGAACTGGTGGGGATCACCGCAGCAGAAGCTGATAACCCGGAGCAAAGTATCCCGAAAGCAACTAACCAG GTTATCTACCGCATCCTGATTTTCTATATTGGTTCGTTAGCCGTTCTGCTCTCACTGATGCCGTGGACCCGCGTTACCGC CGATACCAGTCCGTTTGTGCTGATCTTCCACGAGTTAGGCGATACCTTTGTGGCGAATGCGCTGAACATCGTGGTACTGA CTGCGGCGCTCTCCGTGTACAACAGCTGCGTATATTGCAACAGCCGTATGCTGTTTGGTCTGGCACAACAGGGGAACGCG CCAAAAGCGCTGGCGTCTGTCGATAAACGCGGCGTACCGGTTAACACCATTCTGGTGTCTGCGCTGGTTACAGCATTGTG CGTATTGATTAACTATCTTGCTCCGGAATCCGCATTTGGCCTGTTAATGGCACTGGTGGTATCCGCACTGGTGATCAACT GGGCGATGATCAGTCTGGCGCATATGAAGTTCCGTCGCGCCAAGCAGGAACAAGGCGTGGTAACTCGCTTCCCTGCTCTG CTTTATCCGCTGGGTAACTGGATCTGCCTGCTGTTTATGGCGGCGGTACTGGTGATTATGCTGATGACCCCAGGAATGGC GATTTCGGTATACCTGATCCCGGTATGGCTGATCGTGTTAGGTATCGGCTATCTGTTTAAAGAGAAAACCGCCAAAGCCG TAAAAGCGCATTAA
Upstream 100 bases:
>100_bases AAACCTCCTTGATGTAAACAAATCAATACAACAAACGGAATTGCAAACTTACACACGCATCACTGCGTAGATCAAAAAAA CAATCACCGCACGAGGTTTC
Downstream 100 bases:
>100_bases TCTCTCTACGCCCTCACCCGTACAGGGTGAGGGCAATAATCTCTACACCAACGCCCCGTAAATCGTCAGTAGCGCAATCA CCACCACGACCACGAACGAG
Product: aromatic amino acid transporter
Products: L-tryptophan [Cytoplasm]; Proton [Cytoplasm]; Proton [Cytoplasm]; L-tyrosine [Cytoplasm]; Proton [Cytoplasm]; L-phenylalanine [Cytoplasm] [C]
Alternate protein names: General aromatic amino acid permease [H]
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MMEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFS HFAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIK VIAVVAMIIFGGWLLFSGNGGPQASVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ VIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNA PKALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQGVVTRFPAL LYPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFKEKTAKAVKAH
Sequences:
>Translated_457_residues MMEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFS HFAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIK VIAVVAMIIFGGWLLFSGNGGPQASVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ VIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNA PKALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQGVVTRFPAL LYPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFKEKTAKAVKAH >Mature_457_residues MMEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFS HFAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIK VIAVVAMIIFGGWLLFSGNGGPQASVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ VIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNA PKALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQGVVTRFPAL LYPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFKEKTAKAVKAH
Specific function: Permease that is involved in the transport across the cytoplasmic membrane of the aromatic amino acids (phenylalanine, tyrosine, and tryptophan) [H]
COG id: COG1113
COG function: function code E; Gamma-aminobutyrate permease and related permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Amino acid transporter (AAT) (TC 2.A.3.1) family [H]
Homologues:
Organism=Homo sapiens, GI258645169, Length=430, Percent_Identity=23.2558139534884, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI110347453, Length=356, Percent_Identity=23.876404494382, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI258614005, Length=431, Percent_Identity=22.737819025522, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI258614003, Length=431, Percent_Identity=22.737819025522, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI181337167, Length=292, Percent_Identity=27.3972602739726, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI4507047, Length=389, Percent_Identity=21.5938303341902, Blast_Score=74, Evalue=4e-13, Organism=Escherichia coli, GI1786302, Length=457, Percent_Identity=99.781181619256, Blast_Score=914, Evalue=0.0, Organism=Escherichia coli, GI1786789, Length=430, Percent_Identity=64.8837209302326, Blast_Score=593, Evalue=1e-171, Organism=Escherichia coli, GI1790653, Length=461, Percent_Identity=40.5639913232104, Blast_Score=352, Evalue=3e-98, Organism=Escherichia coli, GI1786602, Length=453, Percent_Identity=43.4878587196468, Blast_Score=344, Evalue=6e-96, Organism=Escherichia coli, GI48994972, Length=431, Percent_Identity=40.1392111368909, Blast_Score=337, Evalue=1e-93, Organism=Escherichia coli, GI87081915, Length=456, Percent_Identity=36.8421052631579, Blast_Score=303, Evalue=2e-83, Organism=Escherichia coli, GI87081708, Length=465, Percent_Identity=35.0537634408602, Blast_Score=289, Evalue=3e-79, Organism=Escherichia coli, GI1789017, Length=433, Percent_Identity=36.7205542725173, Blast_Score=280, Evalue=2e-76, Organism=Escherichia coli, GI1788480, Length=392, Percent_Identity=35.969387755102, Blast_Score=255, Evalue=3e-69, Organism=Escherichia coli, GI87081869, Length=173, Percent_Identity=26.0115606936416, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17531343, Length=377, Percent_Identity=25.9946949602122, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17532491, Length=398, Percent_Identity=27.1356783919598, Blast_Score=85, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17533459, Length=293, Percent_Identity=24.5733788395904, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320772, Length=449, Percent_Identity=35.8574610244989, Blast_Score=244, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6324061, Length=440, Percent_Identity=33.6363636363636, Blast_Score=236, Evalue=4e-63, Organism=Saccharomyces cerevisiae, GI6324924, Length=458, Percent_Identity=33.4061135371179, Blast_Score=223, Evalue=5e-59, Organism=Saccharomyces cerevisiae, GI6324553, Length=398, Percent_Identity=33.9195979899498, Blast_Score=214, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6320717, Length=406, Percent_Identity=32.512315270936, Blast_Score=208, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6322892, Length=431, Percent_Identity=34.5707656612529, Blast_Score=206, Evalue=9e-54, Organism=Saccharomyces cerevisiae, GI6321053, Length=423, Percent_Identity=31.4420803782506, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6319824, Length=402, Percent_Identity=31.592039800995, Blast_Score=200, Evalue=5e-52, Organism=Saccharomyces cerevisiae, GI6324990, Length=449, Percent_Identity=30.7349665924276, Blast_Score=198, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6324059, Length=440, Percent_Identity=33.1818181818182, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6321629, Length=400, Percent_Identity=30.5, Blast_Score=191, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6319543, Length=398, Percent_Identity=30.9045226130653, Blast_Score=181, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6320251, Length=405, Percent_Identity=29.6296296296296, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6319542, Length=406, Percent_Identity=28.8177339901478, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6319608, Length=418, Percent_Identity=28.9473684210526, Blast_Score=169, Evalue=6e-43, Organism=Saccharomyces cerevisiae, GI6322967, Length=399, Percent_Identity=29.8245614035088, Blast_Score=167, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6324981, Length=417, Percent_Identity=28.537170263789, Blast_Score=152, Evalue=9e-38, Organism=Saccharomyces cerevisiae, GI6320364, Length=472, Percent_Identity=26.6949152542373, Blast_Score=122, Evalue=9e-29, Organism=Drosophila melanogaster, GI24667468, Length=406, Percent_Identity=24.1379310344828, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI24666159, Length=370, Percent_Identity=21.8918918918919, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI221512776, Length=375, Percent_Identity=21.8666666666667, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24668806, Length=403, Percent_Identity=22.3325062034739, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI21356285, Length=403, Percent_Identity=22.3325062034739, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24668802, Length=403, Percent_Identity=22.3325062034739, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 - InterPro: IPR004840 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 49677; Mature: 49677
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: PS00218 AMINO_ACID_PERMEASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAF CCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHCCHHHHHCCCCCEEHHHHHHHHHHH LIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQF HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH WYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNG HCCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEECCC GPQASVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHCCHHHHH VIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVY HHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEHHHHCHHHHHHHHHHHHHHHHHHHH NSCVYCNSRMLFGLAQQGNAPKALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFG HHHHHCCCHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH LLMALVVSALVINWAMISLAHMKFRRAKQEQGVVTRFPALLYPLGNWICLLFMAAVLVIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMTPGMAISVYLIPVWLIVLGIGYLFKEKTAKAVKAH HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAF CCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHCCHHHHHCCCCCEEHHHHHHHHHHH LIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQF HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH WYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNG HCCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEECCC GPQASVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHCCHHHHH VIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVY HHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEHHHHCHHHHHHHHHHHHHHHHHHHH NSCVYCNSRMLFGLAQQGNAPKALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFG HHHHHCCCHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH LLMALVVSALVINWAMISLAHMKFRRAKQEQGVVTRFPALLYPLGNWICLLFMAAVLVIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMTPGMAISVYLIPVWLIVLGIGYLFKEKTAKAVKAH HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-tryptophan [Periplasm]; Proton [Periplasm]; Proton [Periplasm]; L-tyrosine [Periplasm]; Proton [Periplasm]; L-phenylalanine [Periplasm] [C]
Specific reaction: L-tryptophan [Periplasm] + Proton [Periplasm] = L-tryptophan [Cytoplasm] + Proton [Cytoplasm] Proton [Periplasm] + L-tyrosine [Periplasm] = Proton [Cytoplasm] + L-tyrosine [Cytoplasm] Proton [Periplasm] + L-phenylalanine [Periplasm] = Proton [Cytoplasm] +
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]