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The map label for this gene is 29349656

Identifier: 29349656

GI number: 29349656

Start: 5599443

End: 5600096

Strand: Reverse

Name: 29349656

Synonym: BT_4248

Alternate gene names: NA

Gene position: 5600096-5599443 (Counterclockwise)

Preceding gene: 29349659

Following gene: 29349655

Centisome position: 89.45

GC content: 31.8

Gene sequence:

>654_bases
ATGAATTCAATCAGAGATAATATTAACGACGAATTTATAAAGGTGATAGCACAACAAAACCAAATGCACGTTTTACCGGA
TAGTACAAAAGTATGGATGGAATCAGGTAGTTCCATTAAATACACAAAAGCCTTCAACAAAAAAAGAGAAGTATGGTTAG
AAGGCAACTCATTTTTTGAGGTATATAAACATGAAGGCAGTTTCTTCCAAGTACATATTAATAAAGCTTTTATAGAAGTA
AAGGGAACCTGTTTCCAAATCAAGCAAACTAATGCTGAAAAAAATGAAATCACGCTGTTTCATGGTAAAATTGAATTCAA
TGTAGAATCTACAGGAGAGAAAATTATCATGTCTCCATCGCAAAAGGTAATGTATAATCCAAACAATGCACAAACATTAG
TTGAGAATGTTATGGATATCAATTGGAAGGACGGAAGATACAACTTCAAAGAAACCCCATTATCCCAGCTCATTTCGATT
ATAAATCAAATATACCAATCAAATATAATTCTAGAAGGAAAGTTTACTAAACAGCCTTCATTCACAGGCAGCATCCGTTA
TGATGAAACATTGGATGACGTGATAGATAAACTCTGTTTCAGCCTTAACCTTACATACAAAAAACAGAATAGAAAAATAG
TAATATATAATTAA

Upstream 100 bases:

>100_bases
TTTTTCGAAAAGTCATTTTTTTATCTTAGTTCTAACAGAACTAAGATGGCATTTTGCCGTAGCTTCACTTGCTCTTTTAC
TAACAATAGGAGGATTTTGG

Downstream 100 bases:

>100_bases
CCATATTTCTAATAATTAACCCAATATTTAACCTCACAACAAGTTAAATCATGAAAAAAAATCACAGTTGTTACCGGAGG
CGATATCTGAAGCATATCGC

Product: putative anti-sigma factor

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MNSIRDNINDEFIKVIAQQNQMHVLPDSTKVWMESGSSIKYTKAFNKKREVWLEGNSFFEVYKHEGSFFQVHINKAFIEV
KGTCFQIKQTNAEKNEITLFHGKIEFNVESTGEKIIMSPSQKVMYNPNNAQTLVENVMDINWKDGRYNFKETPLSQLISI
INQIYQSNIILEGKFTKQPSFTGSIRYDETLDDVIDKLCFSLNLTYKKQNRKIVIYN

Sequences:

>Translated_217_residues
MNSIRDNINDEFIKVIAQQNQMHVLPDSTKVWMESGSSIKYTKAFNKKREVWLEGNSFFEVYKHEGSFFQVHINKAFIEV
KGTCFQIKQTNAEKNEITLFHGKIEFNVESTGEKIIMSPSQKVMYNPNNAQTLVENVMDINWKDGRYNFKETPLSQLISI
INQIYQSNIILEGKFTKQPSFTGSIRYDETLDDVIDKLCFSLNLTYKKQNRKIVIYN
>Mature_217_residues
MNSIRDNINDEFIKVIAQQNQMHVLPDSTKVWMESGSSIKYTKAFNKKREVWLEGNSFFEVYKHEGSFFQVHINKAFIEV
KGTCFQIKQTNAEKNEITLFHGKIEFNVESTGEKIIMSPSQKVMYNPNNAQTLVENVMDINWKDGRYNFKETPLSQLISI
INQIYQSNIILEGKFTKQPSFTGSIRYDETLDDVIDKLCFSLNLTYKKQNRKIVIYN

Specific function: Unknown

COG id: COG3712

COG function: function code PT; Fe2+-dicitrate sensor, membrane component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25346; Mature: 25346

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIRDNINDEFIKVIAQQNQMHVLPDSTKVWMESGSSIKYTKAFNKKREVWLEGNSFFE
CCCHHHCCCHHHHHHHHCCCCEEECCCCCEEEECCCCCEEEEHHCCCCCEEEECCCCEEE
VYKHEGSFFQVHINKAFIEVKGTCFQIKQTNAEKNEITLFHGKIEFNVESTGEKIIMSPS
EEECCCCEEEEEEEEEEEEEECEEEEEEECCCCCCEEEEEEEEEEEEEECCCCEEEECCC
QKVMYNPNNAQTLVENVMDINWKDGRYNFKETPLSQLISIINQIYQSNIILEGKFTKQPS
CEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCC
FTGSIRYDETLDDVIDKLCFSLNLTYKKQNRKIVIYN
CCEEEEECHHHHHHHHHHHHHEEEEEEECCCEEEEEC
>Mature Secondary Structure
MNSIRDNINDEFIKVIAQQNQMHVLPDSTKVWMESGSSIKYTKAFNKKREVWLEGNSFFE
CCCHHHCCCHHHHHHHHCCCCEEECCCCCEEEECCCCCEEEEHHCCCCCEEEECCCCEEE
VYKHEGSFFQVHINKAFIEVKGTCFQIKQTNAEKNEITLFHGKIEFNVESTGEKIIMSPS
EEECCCCEEEEEEEEEEEEEECEEEEEEECCCCCCEEEEEEEEEEEEEECCCCEEEECCC
QKVMYNPNNAQTLVENVMDINWKDGRYNFKETPLSQLISIINQIYQSNIILEGKFTKQPS
CEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCC
FTGSIRYDETLDDVIDKLCFSLNLTYKKQNRKIVIYN
CCEEEEECHHHHHHHHHHHHHEEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA