| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349642
Identifier: 29349642
GI number: 29349642
Start: 5574259
End: 5574828
Strand: Reverse
Name: 29349642
Synonym: BT_4234
Alternate gene names: NA
Gene position: 5574828-5574259 (Counterclockwise)
Preceding gene: 29349648
Following gene: 29349641
Centisome position: 89.05
GC content: 44.04
Gene sequence:
>570_bases ATGAAAAAGAAAAGAATCTTATTTTTGTTCGTTACCTTGTTTGCTTCTACCTTATTATATAGTCAGGTAGTCGGAGTGAA AACCAATCTTGTAATGGACGCGATGAAAATTATCAATCTCGGAGCCGAAGTCGGTCTGAGTAAGAAGTTAACGCTGGACT TGTATGCCAACTATAATCCGTGGAAATACAAAGATCAGAAGATGATGAAGATGCTCGCCATCCAGCCGGAACTCCGTTAC TGGTTCTGCGACAAGTTCAATGGACACTTTGTGGGATTCCATGTACATGGAGGCGTCTACCAGGCTGCCGCCATCAATAT GCCCTGGGGCATCTGGCCGGAACTGAAGGACCACCGCTTCAAAGGCAATTTCTTCGGTGCTGGTATTTCCTACGGTTATC AATGGATTCTTGCCAAGCATTGGAATCTGGAAGGGAATATTGGTGTAGGTTACGCACGTGTCAAGTATGAGCAGTTCGAA TGCAAGACGTGCGGTGAGAAGGTTAGCGAAGGACATAAGAACTATTTAGGTCCCACGAAAGCTGCTATCAGTTTAATCTA TTTATTCTAA
Upstream 100 bases:
>100_bases TTTCCATTGAAAGGAAAGAGAAGAAAGATGAATCCACCAATTAACGTCTATTCATATAACCGTTACTTTTGCAACATCAA CAAACAAAACCCATCATGCG
Downstream 100 bases:
>100_bases AACAAAACAAATATGAAAAAGATATTATGCATACTCTTTTGCCTGCTGCCTGTATTGGGCGGGAAAGCGCAGACACTTTA TAGAGATCAGGTGCGTATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MKKKRILFLFVTLFASTLLYSQVVGVKTNLVMDAMKIINLGAEVGLSKKLTLDLYANYNPWKYKDQKMMKMLAIQPELRY WFCDKFNGHFVGFHVHGGVYQAAAINMPWGIWPELKDHRFKGNFFGAGISYGYQWILAKHWNLEGNIGVGYARVKYEQFE CKTCGEKVSEGHKNYLGPTKAAISLIYLF
Sequences:
>Translated_189_residues MKKKRILFLFVTLFASTLLYSQVVGVKTNLVMDAMKIINLGAEVGLSKKLTLDLYANYNPWKYKDQKMMKMLAIQPELRY WFCDKFNGHFVGFHVHGGVYQAAAINMPWGIWPELKDHRFKGNFFGAGISYGYQWILAKHWNLEGNIGVGYARVKYEQFE CKTCGEKVSEGHKNYLGPTKAAISLIYLF >Mature_189_residues MKKKRILFLFVTLFASTLLYSQVVGVKTNLVMDAMKIINLGAEVGLSKKLTLDLYANYNPWKYKDQKMMKMLAIQPELRY WFCDKFNGHFVGFHVHGGVYQAAAINMPWGIWPELKDHRFKGNFFGAGISYGYQWILAKHWNLEGNIGVGYARVKYEQFE CKTCGEKVSEGHKNYLGPTKAAISLIYLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21767; Mature: 21767
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKRILFLFVTLFASTLLYSQVVGVKTNLVMDAMKIINLGAEVGLSKKLTLDLYANYNP CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCC WKYKDQKMMKMLAIQPELRYWFCDKFNGHFVGFHVHGGVYQAAAINMPWGIWPELKDHRF CCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCEE KGNFFGAGISYGYQWILAKHWNLEGNIGVGYARVKYEQFECKTCGEKVSEGHKNYLGPTK CCCEEECCHHHCEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCHHCCCCHH AAISLIYLF HHEEEEEEC >Mature Secondary Structure MKKKRILFLFVTLFASTLLYSQVVGVKTNLVMDAMKIINLGAEVGLSKKLTLDLYANYNP CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCC WKYKDQKMMKMLAIQPELRYWFCDKFNGHFVGFHVHGGVYQAAAINMPWGIWPELKDHRF CCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCEE KGNFFGAGISYGYQWILAKHWNLEGNIGVGYARVKYEQFECKTCGEKVSEGHKNYLGPTK CCCEEECCHHHCEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCHHCCCCHH AAISLIYLF HHEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA