Click here to switch to the map view.

The map label for this gene is 29349520

Identifier: 29349520

GI number: 29349520

Start: 5381274

End: 5382857

Strand: Reverse

Name: 29349520

Synonym: BT_4112

Alternate gene names: NA

Gene position: 5382857-5381274 (Counterclockwise)

Preceding gene: 29349521

Following gene: 29349515

Centisome position: 85.98

GC content: 35.67

Gene sequence:

>1584_bases
ATGAAAAAATATATAATCACAGCATTTGCTTTTATCACACTGTTGACAGGCAGCGTTACATTCACTGCATGTGAAGATAT
AGATGACATAAAAGAATTAAATTTAGATCGTCTATTATCCCCGACTAATCTGACCGCAAGAGTTAGAGACAAAGTAAATA
TAGAATTAACATGGGATGAAATGGATAGAGCCCAATCCTATGTAATCGAAGTATTTAAAGAAGATCCTGATTTTACAGGA
ACTGCTATTTCTACGTTAGAATCTGAAAAAGCAACTTATACGGTTACAGGATTAGAAGGAGAAACATCATACTCCATCCG
GGTAAAAAGTGTAGCAGAAGGAATTACTGATTCCAAATGGGTTAGCGCTACCCGTTCAACAGATGCAGAACAAATTCTTC
TGGAAGTTGCAGAAGAAGATCTGACAGCATCAGAAGTAACACTTCGCTGGCCCGCCGGACAAGTTGCTACGGAAATCATC
ATAACTCCAAATGATGTTGCAGCACACCGTGTGACTTCTGATGAAATTGCAGCCGGTGCCGCTACTATTAAAAACTTAAA
GTCTGAAACTACTTATACTGCAACTTTAAAGAATGGTGATAAAACTCGTGGTACGATGGTATTCACAACTCTCATAAACT
TGGATGGAGCATTACCTGCTTATCCGGGTGACAATCTTGCAACAATCATAGCAACAGCCGAGGCTAATGCTACTATTGTC
CTATTACCTAAAGACGACAATAATAGCTTCATATATACAGATGAAAGTGGAACTGCAAAAACATTGGAAATAGAATTAAC
CAAAGATGTTACTATAAAAGGTTTATATGCAGAAAACCGTCCAACTACTAATATCAAGTTTGTATTAAGTGGATGTAACA
ATTTCAAAATAGAGAACCTTAATTTAACTGCTAGTGACGGAGGTACAATTATTACAGTACTTGATAGTAAAGGTGGAAAT
ATAACTGTTACAAATTGTGATGTAACTGGATTTGGTTCGTTGTTAGTAGAGAATGATAATACACAAACTGGTACTATCAA
TACATTTACTGTAGATAACTGTATTTTCCATGATATGGCAAGTGGCAAAAGATTTGTAGACTATCAAAAGAAGAAATCCT
TTATAGCAGAGTTTACATTGAAAAATTCCACATTCTATAATTGTTGCTCTGGTTCTGATTTTATTCGTTTTGACAGACAT
TCAACGAAAGGCAATATCATAAATATATCGAATTGCACTCTGTATGGAATTGAAGCAACAAGTAAAGGTCTCTTCTATGT
CCGTTCCAACTCAGTTGGTAATAAAGATTTTACTGCAAATATCACAAAATGCATTTTTGCTAACATGAGTAATAAAGTAT
TCTTTAGTCAAGATACTAAAACTGATAATCTGACATTTAACTCGAACTATTATTTCGAGGCACCTTCCTTACTATCAATA
CCTGAAGGTGGAGCCGGTAAAGTGGTAGACGCAACTGGAGTCACTCTTGATCCAGGCTTTACAGATGCAGCAAACGGTAA
TTTCAAAGTATCTAACCAAACAATCATAGATAATGAAATTGGTGATCCACGCTGGAGAAAATAA

Upstream 100 bases:

>100_bases
ATATATGTATTGGCCTATCTTCCAGGTTAATCTTAATGCCAATCCGGAATTGAAAAATTATTCCTGGTATAATTAATTCA
TACACTTAAATATTGATAAG

Downstream 100 bases:

>100_bases
GATTTTATAAAATCTAGTTAAGCTAAAAGAGGCTAAAATCAAATAATATTTTAGTCTCTTTTCTCAAGATAGCGATACTC
GTATTCGGGCATCGCTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: Fibronectin Type III Domain Protein

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MKKYIITAFAFITLLTGSVTFTACEDIDDIKELNLDRLLSPTNLTARVRDKVNIELTWDEMDRAQSYVIEVFKEDPDFTG
TAISTLESEKATYTVTGLEGETSYSIRVKSVAEGITDSKWVSATRSTDAEQILLEVAEEDLTASEVTLRWPAGQVATEII
ITPNDVAAHRVTSDEIAAGAATIKNLKSETTYTATLKNGDKTRGTMVFTTLINLDGALPAYPGDNLATIIATAEANATIV
LLPKDDNNSFIYTDESGTAKTLEIELTKDVTIKGLYAENRPTTNIKFVLSGCNNFKIENLNLTASDGGTIITVLDSKGGN
ITVTNCDVTGFGSLLVENDNTQTGTINTFTVDNCIFHDMASGKRFVDYQKKKSFIAEFTLKNSTFYNCCSGSDFIRFDRH
STKGNIINISNCTLYGIEATSKGLFYVRSNSVGNKDFTANITKCIFANMSNKVFFSQDTKTDNLTFNSNYYFEAPSLLSI
PEGGAGKVVDATGVTLDPGFTDAANGNFKVSNQTIIDNEIGDPRWRK

Sequences:

>Translated_527_residues
MKKYIITAFAFITLLTGSVTFTACEDIDDIKELNLDRLLSPTNLTARVRDKVNIELTWDEMDRAQSYVIEVFKEDPDFTG
TAISTLESEKATYTVTGLEGETSYSIRVKSVAEGITDSKWVSATRSTDAEQILLEVAEEDLTASEVTLRWPAGQVATEII
ITPNDVAAHRVTSDEIAAGAATIKNLKSETTYTATLKNGDKTRGTMVFTTLINLDGALPAYPGDNLATIIATAEANATIV
LLPKDDNNSFIYTDESGTAKTLEIELTKDVTIKGLYAENRPTTNIKFVLSGCNNFKIENLNLTASDGGTIITVLDSKGGN
ITVTNCDVTGFGSLLVENDNTQTGTINTFTVDNCIFHDMASGKRFVDYQKKKSFIAEFTLKNSTFYNCCSGSDFIRFDRH
STKGNIINISNCTLYGIEATSKGLFYVRSNSVGNKDFTANITKCIFANMSNKVFFSQDTKTDNLTFNSNYYFEAPSLLSI
PEGGAGKVVDATGVTLDPGFTDAANGNFKVSNQTIIDNEIGDPRWRK
>Mature_527_residues
MKKYIITAFAFITLLTGSVTFTACEDIDDIKELNLDRLLSPTNLTARVRDKVNIELTWDEMDRAQSYVIEVFKEDPDFTG
TAISTLESEKATYTVTGLEGETSYSIRVKSVAEGITDSKWVSATRSTDAEQILLEVAEEDLTASEVTLRWPAGQVATEII
ITPNDVAAHRVTSDEIAAGAATIKNLKSETTYTATLKNGDKTRGTMVFTTLINLDGALPAYPGDNLATIIATAEANATIV
LLPKDDNNSFIYTDESGTAKTLEIELTKDVTIKGLYAENRPTTNIKFVLSGCNNFKIENLNLTASDGGTIITVLDSKGGN
ITVTNCDVTGFGSLLVENDNTQTGTINTFTVDNCIFHDMASGKRFVDYQKKKSFIAEFTLKNSTFYNCCSGSDFIRFDRH
STKGNIINISNCTLYGIEATSKGLFYVRSNSVGNKDFTANITKCIFANMSNKVFFSQDTKTDNLTFNSNYYFEAPSLLSI
PEGGAGKVVDATGVTLDPGFTDAANGNFKVSNQTIIDNEIGDPRWRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57534; Mature: 57534

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50853 FN3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYIITAFAFITLLTGSVTFTACEDIDDIKELNLDRLLSPTNLTARVRDKVNIELTWDE
CCCEEEHHHHHHHHHCCCEEEEECCCCHHHHHCCHHHCCCCCCCEEEEECEEEEEEEHHH
MDRAQSYVIEVFKEDPDFTGTAISTLESEKATYTVTGLEGETSYSIRVKSVAEGITDSKW
HHHHHHHEEEEECCCCCCCCHHHHHCCCCCCEEEEEECCCCCEEEEEEEHHHCCCCCCHH
VSATRSTDAEQILLEVAEEDLTASEVTLRWPAGQVATEIIITPNDVAAHRVTSDEIAAGA
EEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCHHEEEECCHHHHHHH
ATIKNLKSETTYTATLKNGDKTRGTMVFTTLINLDGALPAYPGDNLATIIATAEANATIV
HHHHHCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCEEEE
LLPKDDNNSFIYTDESGTAKTLEIELTKDVTIKGLYAENRPTTNIKFVLSGCNNFKIENL
EEEECCCCCEEEECCCCCEEEEEEEEECCEEEEEEEECCCCCCEEEEEEECCCCEEEEEE
NLTASDGGTIITVLDSKGGNITVTNCDVTGFGSLLVENDNTQTGTINTFTVDNCIFHDMA
EEEECCCCEEEEEEECCCCEEEEEECCCCCCCEEEEECCCCCCCEEEEEEECCEEEHHHC
SGKRFVDYQKKKSFIAEFTLKNSTFYNCCSGSDFIRFDRHSTKGNIINISNCTLYGIEAT
CCCEEECHHHHHCEEEEEEECCCCEEEECCCCCEEEEECCCCCCCEEEECCEEEEEEEEC
SKGLFYVRSNSVGNKDFTANITKCIFANMSNKVFFSQDTKTDNLTFNSNYYFEAPSLLSI
CCCEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCEEECCCEEECCCCEEEC
PEGGAGKVVDATGVTLDPGFTDAANGNFKVSNQTIIDNEIGDPRWRK
CCCCCCCEEEECCCEECCCCCCCCCCCEEECCCEEEECCCCCCCCCC
>Mature Secondary Structure
MKKYIITAFAFITLLTGSVTFTACEDIDDIKELNLDRLLSPTNLTARVRDKVNIELTWDE
CCCEEEHHHHHHHHHCCCEEEEECCCCHHHHHCCHHHCCCCCCCEEEEECEEEEEEEHHH
MDRAQSYVIEVFKEDPDFTGTAISTLESEKATYTVTGLEGETSYSIRVKSVAEGITDSKW
HHHHHHHEEEEECCCCCCCCHHHHHCCCCCCEEEEEECCCCCEEEEEEEHHHCCCCCCHH
VSATRSTDAEQILLEVAEEDLTASEVTLRWPAGQVATEIIITPNDVAAHRVTSDEIAAGA
EEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCHHEEEECCHHHHHHH
ATIKNLKSETTYTATLKNGDKTRGTMVFTTLINLDGALPAYPGDNLATIIATAEANATIV
HHHHHCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCEEEE
LLPKDDNNSFIYTDESGTAKTLEIELTKDVTIKGLYAENRPTTNIKFVLSGCNNFKIENL
EEEECCCCCEEEECCCCCEEEEEEEEECCEEEEEEEECCCCCCEEEEEEECCCCEEEEEE
NLTASDGGTIITVLDSKGGNITVTNCDVTGFGSLLVENDNTQTGTINTFTVDNCIFHDMA
EEEECCCCEEEEEEECCCCEEEEEECCCCCCCEEEEECCCCCCCEEEEEEECCEEEHHHC
SGKRFVDYQKKKSFIAEFTLKNSTFYNCCSGSDFIRFDRHSTKGNIINISNCTLYGIEAT
CCCEEECHHHHHCEEEEEEECCCCEEEECCCCCEEEEECCCCCCCEEEECCEEEEEEEEC
SKGLFYVRSNSVGNKDFTANITKCIFANMSNKVFFSQDTKTDNLTFNSNYYFEAPSLLSI
CCCEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCEEECCCEEECCCCEEEC
PEGGAGKVVDATGVTLDPGFTDAANGNFKVSNQTIIDNEIGDPRWRK
CCCCCCCEEEECCCEECCCCCCCCCCCEEECCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA