| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349449
Identifier: 29349449
GI number: 29349449
Start: 5256049
End: 5257923
Strand: Reverse
Name: 29349449
Synonym: BT_4041
Alternate gene names: NA
Gene position: 5257923-5256049 (Counterclockwise)
Preceding gene: 29349450
Following gene: 29349448
Centisome position: 83.99
GC content: 42.24
Gene sequence:
>1875_bases ATGGACGCTCATGACACTAATCTTCCCTTGAACCAAGGGGAGTTAGAAGAAGAAAAGAAAACAGTTGAGGTTTCTGAAGC CATTACAGAGACTCCGACTGAAGAAGGTACCGAAAAAGTTACTGAAGAAGTTACTGCCGAAGTTCAGACTGAAGCAGCAC CTAAACCTGCCACAAAGGAAGACGTACTGAACCGATTGAAAGAGCTTGCGCAAGACTCGGAAAACGCAAACAAGCAGGAA ATTGACAATCTAAAACAATCATTCTACAAGTTACACAACGCCGAGTTAGAAGCTGCTAAAAAGCAATTTATCGACAATGG AGGCGCTGCCGAAGACTTCACTCCGAAGGATGATCCGACAGAAGAGGAATTCAAACGCCTCATGGGATCGATCAAAGAGA AAAGAAGTCAACTTGTAGCCGAACAGGAACGTCAGAAAGAAGAAAATCTGCAAGTCAAGCTTTCCATTATCGAAGAACTT AAAGAACTGGTAGAATCGGGTGATGATGCCAATAAATCTTATACAGAGTTCAAAAAGCTGCAACAACAATGGAACGAAAC CAAACTGGTTCCGCAGGGCAAGGTGAATGAACTTTGGAAGAATTACCAACTGTACGTAGAGAAATTCTATGATCTGCTGA AACTGAACAACGAATTTCGTGAATACGACTTCAAAAAGAATCTGGAGATCAAGACTCATCTTTGCGAAGCAGCCGAAAAG CTTGCTGACGAAGAAGATGTAGTTTCCGCTTTCCACCAACTTCAGAAGCTGCATCAGGAATTTCGTGATACGGGTCCGGT AGCTAAAGAACTGCGTGACGAAATCTGGAACCGTTTCAAGGCTGCTTCTACGGCTGTAAACCGCCGTCACCAGCAACATT TCGAAGCGCTGAAAGAATCGGAACAGCACAATCTGGATCAAAAAACTGTCATTTGCGAAATTGTAGAAGCAATTGAATAT GATGAACTGAAAACATTCTCGGCTTGGGAGAACAAGACGCAGGAAGTGATTGCTCTGCAAAACAAATGGAAGACAATCGG ATTCGCTCCCCAAAAGATGAATGTGAAGATCTTCGAACGCTTCCGTCATGCCTGCGATGACTTCTTCAAAAAGAAAGGAG AATTCTTCAAGGCTCTGAAAGAAGGAATGAACGAGAATCTGGAAAAGAAGAAAGCACTTTGCGAAAAGGCAGAAGCACTG AAGGACAGCACCGACTGGAAAGCAACTGCTGATGCGCTGACCAAATTGCAGAAAGAGTGGAAAACAATCGGTCCGGTAGC CAAGAAATACTCGGATGCCGTATGGAAACGTTTCATCACTGCTTGTGACTATTTCTTCGACCAGAAAAACAAGGCTACTT CTTCACAACGTTCTGTAGAAATAGAGAACATGGAGAAGAAGAAAGCGTTGATTGAAAAATTAGCTTCAATCGATGAAAAC ATGGATACTGACGAAGCCAGCACTTTGGTACGCGAACTGATGAAGGAGTGGAATACCATCGGTCATGTTCCGTTCAAGGA GAAAGACAAATTGTATAAGCAATATCATGGCTTGATCGATCAACTGTTCGACCGTTTCAACATCAGTGCATCCAACAAGA AATTAAGCAATTTCCGTTCAAACATCAGCAATATCCAAGGAGGAGGCTCTCAGTCTTTATATAGAGAACGGGAAAAACTG GTACGTATTTATGAGAATATGAAGAATGAACTTCAGACTTATGAAAATAACCTGGGATTCCTTACTTCTTCTTCCAAGAA AGGTAGCAGCCTGCTGACTGAACTGAATCGAAAAGTGGATAAACTGAAAGCTGACCTTGAACTGGTATTACAGAAAATCA AGGTTATCGATGAATCATTGAAAGCGGAAGAATAA
Upstream 100 bases:
>100_bases TTATTATCATAAAAATGCGATAATCAAAAAAAAATAAGCAAAAGAGTATGAAGTAATCGTTTTATTTCATTATTTTGTGA CCCAAAACTAATATACAATG
Downstream 100 bases:
>100_bases ATATTCCCGAAACAAAGGATAAATCCTCTAATATAAAAGCCAACTAACCCATTATGGATTTAGTTGGCTTTTTTATTGAA GCTTTCATTATATTCTCACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 624; Mature: 624
Protein sequence:
>624_residues MDAHDTNLPLNQGELEEEKKTVEVSEAITETPTEEGTEKVTEEVTAEVQTEAAPKPATKEDVLNRLKELAQDSENANKQE IDNLKQSFYKLHNAELEAAKKQFIDNGGAAEDFTPKDDPTEEEFKRLMGSIKEKRSQLVAEQERQKEENLQVKLSIIEEL KELVESGDDANKSYTEFKKLQQQWNETKLVPQGKVNELWKNYQLYVEKFYDLLKLNNEFREYDFKKNLEIKTHLCEAAEK LADEEDVVSAFHQLQKLHQEFRDTGPVAKELRDEIWNRFKAASTAVNRRHQQHFEALKESEQHNLDQKTVICEIVEAIEY DELKTFSAWENKTQEVIALQNKWKTIGFAPQKMNVKIFERFRHACDDFFKKKGEFFKALKEGMNENLEKKKALCEKAEAL KDSTDWKATADALTKLQKEWKTIGPVAKKYSDAVWKRFITACDYFFDQKNKATSSQRSVEIENMEKKKALIEKLASIDEN MDTDEASTLVRELMKEWNTIGHVPFKEKDKLYKQYHGLIDQLFDRFNISASNKKLSNFRSNISNIQGGGSQSLYREREKL VRIYENMKNELQTYENNLGFLTSSSKKGSSLLTELNRKVDKLKADLELVLQKIKVIDESLKAEE
Sequences:
>Translated_624_residues MDAHDTNLPLNQGELEEEKKTVEVSEAITETPTEEGTEKVTEEVTAEVQTEAAPKPATKEDVLNRLKELAQDSENANKQE IDNLKQSFYKLHNAELEAAKKQFIDNGGAAEDFTPKDDPTEEEFKRLMGSIKEKRSQLVAEQERQKEENLQVKLSIIEEL KELVESGDDANKSYTEFKKLQQQWNETKLVPQGKVNELWKNYQLYVEKFYDLLKLNNEFREYDFKKNLEIKTHLCEAAEK LADEEDVVSAFHQLQKLHQEFRDTGPVAKELRDEIWNRFKAASTAVNRRHQQHFEALKESEQHNLDQKTVICEIVEAIEY DELKTFSAWENKTQEVIALQNKWKTIGFAPQKMNVKIFERFRHACDDFFKKKGEFFKALKEGMNENLEKKKALCEKAEAL KDSTDWKATADALTKLQKEWKTIGPVAKKYSDAVWKRFITACDYFFDQKNKATSSQRSVEIENMEKKKALIEKLASIDEN MDTDEASTLVRELMKEWNTIGHVPFKEKDKLYKQYHGLIDQLFDRFNISASNKKLSNFRSNISNIQGGGSQSLYREREKL VRIYENMKNELQTYENNLGFLTSSSKKGSSLLTELNRKVDKLKADLELVLQKIKVIDESLKAEE >Mature_624_residues MDAHDTNLPLNQGELEEEKKTVEVSEAITETPTEEGTEKVTEEVTAEVQTEAAPKPATKEDVLNRLKELAQDSENANKQE IDNLKQSFYKLHNAELEAAKKQFIDNGGAAEDFTPKDDPTEEEFKRLMGSIKEKRSQLVAEQERQKEENLQVKLSIIEEL KELVESGDDANKSYTEFKKLQQQWNETKLVPQGKVNELWKNYQLYVEKFYDLLKLNNEFREYDFKKNLEIKTHLCEAAEK LADEEDVVSAFHQLQKLHQEFRDTGPVAKELRDEIWNRFKAASTAVNRRHQQHFEALKESEQHNLDQKTVICEIVEAIEY DELKTFSAWENKTQEVIALQNKWKTIGFAPQKMNVKIFERFRHACDDFFKKKGEFFKALKEGMNENLEKKKALCEKAEAL KDSTDWKATADALTKLQKEWKTIGPVAKKYSDAVWKRFITACDYFFDQKNKATSSQRSVEIENMEKKKALIEKLASIDEN MDTDEASTLVRELMKEWNTIGHVPFKEKDKLYKQYHGLIDQLFDRFNISASNKKLSNFRSNISNIQGGGSQSLYREREKL VRIYENMKNELQTYENNLGFLTSSSKKGSSLLTELNRKVDKLKADLELVLQKIKVIDESLKAEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72539; Mature: 72539
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAHDTNLPLNQGELEEEKKTVEVSEAITETPTEEGTEKVTEEVTAEVQTEAAPKPATKE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH DVLNRLKELAQDSENANKQEIDNLKQSFYKLHNAELEAAKKQFIDNGGAAEDFTPKDDPT HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC EEEFKRLMGSIKEKRSQLVAEQERQKEENLQVKLSIIEELKELVESGDDANKSYTEFKKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH QQQWNETKLVPQGKVNELWKNYQLYVEKFYDLLKLNNEFREYDFKKNLEIKTHLCEAAEK HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHH LADEEDVVSAFHQLQKLHQEFRDTGPVAKELRDEIWNRFKAASTAVNRRHQQHFEALKES HCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQHNLDQKTVICEIVEAIEYDELKTFSAWENKTQEVIALQNKWKTIGFAPQKMNVKIFER HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHH FRHACDDFFKKKGEFFKALKEGMNENLEKKKALCEKAEALKDSTDWKATADALTKLQKEW HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH KTIGPVAKKYSDAVWKRFITACDYFFDQKNKATSSQRSVEIENMEKKKALIEKLASIDEN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCC MDTDEASTLVRELMKEWNTIGHVPFKEKDKLYKQYHGLIDQLFDRFNISASNKKLSNFRS CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH NISNIQGGGSQSLYREREKLVRIYENMKNELQTYENNLGFLTSSSKKGSSLLTELNRKVD HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHH KLKADLELVLQKIKVIDESLKAEE HHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDAHDTNLPLNQGELEEEKKTVEVSEAITETPTEEGTEKVTEEVTAEVQTEAAPKPATKE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH DVLNRLKELAQDSENANKQEIDNLKQSFYKLHNAELEAAKKQFIDNGGAAEDFTPKDDPT HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC EEEFKRLMGSIKEKRSQLVAEQERQKEENLQVKLSIIEELKELVESGDDANKSYTEFKKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH QQQWNETKLVPQGKVNELWKNYQLYVEKFYDLLKLNNEFREYDFKKNLEIKTHLCEAAEK HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHH LADEEDVVSAFHQLQKLHQEFRDTGPVAKELRDEIWNRFKAASTAVNRRHQQHFEALKES HCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQHNLDQKTVICEIVEAIEYDELKTFSAWENKTQEVIALQNKWKTIGFAPQKMNVKIFER HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHH FRHACDDFFKKKGEFFKALKEGMNENLEKKKALCEKAEALKDSTDWKATADALTKLQKEW HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH KTIGPVAKKYSDAVWKRFITACDYFFDQKNKATSSQRSVEIENMEKKKALIEKLASIDEN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCC MDTDEASTLVRELMKEWNTIGHVPFKEKDKLYKQYHGLIDQLFDRFNISASNKKLSNFRS CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH NISNIQGGGSQSLYREREKLVRIYENMKNELQTYENNLGFLTSSSKKGSSLLTELNRKVD HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHH KLKADLELVLQKIKVIDESLKAEE HHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA