Click here to switch to the map view.

The map label for this gene is 29349448

Identifier: 29349448

GI number: 29349448

Start: 5253800

End: 5255143

Strand: Reverse

Name: 29349448

Synonym: BT_4040

Alternate gene names: NA

Gene position: 5255143-5253800 (Counterclockwise)

Preceding gene: 29349449

Following gene: 29349447

Centisome position: 83.94

GC content: 46.06

Gene sequence:

>1344_bases
ATGAAAAAATGCTTTGAACTAACACCATGCTTGCTGGCATTCTTATGCATTACCAGCTGCGTAGAAGATGTTGATAACGA
ACGTTCTAAGGGAATGTTCTCAGCATCACAAAGTGGATTCTCCACCATTGAAGTTTACGATTTAGGCCCTCTCAACAAGA
TTGATCTATCCATTGCCAAGGCAGGATTAGAGGATACCGGAGGAACGGTGACTTTTTCAGTAGAACAATCCCTGTTGGAT
TCTCTGAATAATGCGGACGGCACTTCCTATCAATTACTACCTCCCGAATGCTATACGATTGAAAATGCAACCTATTCCGT
CTCTCCCGGCGGAGACAGGCGCGTAACAGGAGGCAGTCTGGTGTATGATCCTCACAAAATCTACAACCTGTGCGGCTTTG
ATGAACTTAAATACGTTCTTCCATTACGGGTATCCTCTACAGGGACTCCTATGAACTCCGACCGAACGGCAACACTTTAC
GGATTTATCGTTAAAGAAGCCATCGTCAGACTTGCATCTACCGGAGGAGACTTCGTAGTAGAAGGAGGAACGACTACTTC
ACCTATGAATCTCGACACAGAGATAAGCTTTGAGAACGAATGGGATCTGACGACCTCGTTTGCAACCAAAGGAGCGGACT
ATGTGGACAACTACAATTCGGCAAATTCGACCTATTACATACCTTTACCTTCCGACTTCTACACTCTTCCCGATGTCACT
ATCGCCAAGGGAAAGACAACGGGAGGCTCTGCTATTAGCCTGCTGGGTGAAACACTTCCCCCCGGAAATTATCTTCTTCC
GGTTTCACTCGGCGGACTTAGCGGACAAGGAGACGCCAGCATCAACATAGACAAGGAAACGGTAGCCAACTATTTCGTAA
TCAAACAAGGCGGCCCTATTAACCGTGACCACTGGACAGTGACTGCCAACACGGAAGAAAAGACAGGCGAAGTTTCAGCC
GCTTACCCCCACAACGGTCAGACAATATCTTTGATTGACGGAGAGATAAACACTTTCTGGCATAGTAAATGGCAGGGAGG
AGAAGTAGCTCCACCATACGAAATAATACTCGACATGGGCAAAGAGAACAGTGTCAGCCAATTAGGACTCATCGCCAGAC
AAAATGCACTTACTTCTATGAACCTTGAGATTTATGCAGGAGATGACGGTGAAACATGGAACCTGATTGGAAAATACTTC
TTTGACGGTAGCATAAAAACAGAGCAAATGGTCCCCGTAAAAGCATGTGATGCACGCTGGATACGTATTTACATCCCCAC
TCTGGGCAGTGGTTCATCTGTAGGACACCTGGCAGAAATATATGTATACGGCACGGACAAGTAA

Upstream 100 bases:

>100_bases
TGCCTATGAGAAAGAAATAAGTATTCCAAATCCAAGAGTACCCACAAGTACTTCAACTTGTTTTTACCCTTTTTACCTTT
AATAAAACTAATATTAATTT

Downstream 100 bases:

>100_bases
CCTTAATTATTTTCTAATTCTTACTTAAAAGAAACATTTATGAATAAGATATTAAAAGTAATGTGTTTCATTCTGTTTGC
CTTATTTGCAGGAATAAACA

Product: putative galactose oxidase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MKKCFELTPCLLAFLCITSCVEDVDNERSKGMFSASQSGFSTIEVYDLGPLNKIDLSIAKAGLEDTGGTVTFSVEQSLLD
SLNNADGTSYQLLPPECYTIENATYSVSPGGDRRVTGGSLVYDPHKIYNLCGFDELKYVLPLRVSSTGTPMNSDRTATLY
GFIVKEAIVRLASTGGDFVVEGGTTTSPMNLDTEISFENEWDLTTSFATKGADYVDNYNSANSTYYIPLPSDFYTLPDVT
IAKGKTTGGSAISLLGETLPPGNYLLPVSLGGLSGQGDASINIDKETVANYFVIKQGGPINRDHWTVTANTEEKTGEVSA
AYPHNGQTISLIDGEINTFWHSKWQGGEVAPPYEIILDMGKENSVSQLGLIARQNALTSMNLEIYAGDDGETWNLIGKYF
FDGSIKTEQMVPVKACDARWIRIYIPTLGSGSSVGHLAEIYVYGTDK

Sequences:

>Translated_447_residues
MKKCFELTPCLLAFLCITSCVEDVDNERSKGMFSASQSGFSTIEVYDLGPLNKIDLSIAKAGLEDTGGTVTFSVEQSLLD
SLNNADGTSYQLLPPECYTIENATYSVSPGGDRRVTGGSLVYDPHKIYNLCGFDELKYVLPLRVSSTGTPMNSDRTATLY
GFIVKEAIVRLASTGGDFVVEGGTTTSPMNLDTEISFENEWDLTTSFATKGADYVDNYNSANSTYYIPLPSDFYTLPDVT
IAKGKTTGGSAISLLGETLPPGNYLLPVSLGGLSGQGDASINIDKETVANYFVIKQGGPINRDHWTVTANTEEKTGEVSA
AYPHNGQTISLIDGEINTFWHSKWQGGEVAPPYEIILDMGKENSVSQLGLIARQNALTSMNLEIYAGDDGETWNLIGKYF
FDGSIKTEQMVPVKACDARWIRIYIPTLGSGSSVGHLAEIYVYGTDK
>Mature_447_residues
MKKCFELTPCLLAFLCITSCVEDVDNERSKGMFSASQSGFSTIEVYDLGPLNKIDLSIAKAGLEDTGGTVTFSVEQSLLD
SLNNADGTSYQLLPPECYTIENATYSVSPGGDRRVTGGSLVYDPHKIYNLCGFDELKYVLPLRVSSTGTPMNSDRTATLY
GFIVKEAIVRLASTGGDFVVEGGTTTSPMNLDTEISFENEWDLTTSFATKGADYVDNYNSANSTYYIPLPSDFYTLPDVT
IAKGKTTGGSAISLLGETLPPGNYLLPVSLGGLSGQGDASINIDKETVANYFVIKQGGPINRDHWTVTANTEEKTGEVSA
AYPHNGQTISLIDGEINTFWHSKWQGGEVAPPYEIILDMGKENSVSQLGLIARQNALTSMNLEIYAGDDGETWNLIGKYF
FDGSIKTEQMVPVKACDARWIRIYIPTLGSGSSVGHLAEIYVYGTDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48379; Mature: 48379

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS50022 FA58C_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKCFELTPCLLAFLCITSCVEDVDNERSKGMFSASQSGFSTIEVYDLGPLNKIDLSIAK
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEECCCCCCCEEEEEECCCCCCEEHHHHH
AGLEDTGGTVTFSVEQSLLDSLNNADGTSYQLLPPECYTIENATYSVSPGGDRRVTGGSL
CCCCCCCCEEEEEEHHHHHHHHCCCCCCEEEEECCCEEEECCCEEEECCCCCCEECCCCE
VYDPHKIYNLCGFDELKYVLPLRVSSTGTPMNSDRTATLYGFIVKEAIVRLASTGGDFVV
EECHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCEEE
EGGTTTSPMNLDTEISFENEWDLTTSFATKGADYVDNYNSANSTYYIPLPSDFYTLPDVT
ECCCCCCCCCCCEEEECCCCCCEEEHHHCCCCHHHCCCCCCCCEEEEECCCCCEECCCEE
IAKGKTTGGSAISLLGETLPPGNYLLPVSLGGLSGQGDASINIDKETVANYFVIKQGGPI
EECCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEECHHHCCEEEEEECCCCC
NRDHWTVTANTEEKTGEVSAAYPHNGQTISLIDGEINTFWHSKWQGGEVAPPYEIILDMG
CCCCEEEEECCCCCCCCEEEECCCCCCEEEEECCCCEEEECCCCCCCCCCCCHHHEEECC
KENSVSQLGLIARQNALTSMNLEIYAGDDGETWNLIGKYFFDGSIKTEQMVPVKACDARW
CCCCHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCCCCEECEEEECCCEE
IRIYIPTLGSGSSVGHLAEIYVYGTDK
EEEEEEECCCCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MKKCFELTPCLLAFLCITSCVEDVDNERSKGMFSASQSGFSTIEVYDLGPLNKIDLSIAK
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEECCCCCCCEEEEEECCCCCCEEHHHHH
AGLEDTGGTVTFSVEQSLLDSLNNADGTSYQLLPPECYTIENATYSVSPGGDRRVTGGSL
CCCCCCCCEEEEEEHHHHHHHHCCCCCCEEEEECCCEEEECCCEEEECCCCCCEECCCCE
VYDPHKIYNLCGFDELKYVLPLRVSSTGTPMNSDRTATLYGFIVKEAIVRLASTGGDFVV
EECHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCEEE
EGGTTTSPMNLDTEISFENEWDLTTSFATKGADYVDNYNSANSTYYIPLPSDFYTLPDVT
ECCCCCCCCCCCEEEECCCCCCEEEHHHCCCCHHHCCCCCCCCEEEEECCCCCEECCCEE
IAKGKTTGGSAISLLGETLPPGNYLLPVSLGGLSGQGDASINIDKETVANYFVIKQGGPI
EECCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEECHHHCCEEEEEECCCCC
NRDHWTVTANTEEKTGEVSAAYPHNGQTISLIDGEINTFWHSKWQGGEVAPPYEIILDMG
CCCCEEEEECCCCCCCCEEEECCCCCCEEEEECCCCEEEECCCCCCCCCCCCHHHEEECC
KENSVSQLGLIARQNALTSMNLEIYAGDDGETWNLIGKYFFDGSIKTEQMVPVKACDARW
CCCCHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCCCCEECEEEECCCEE
IRIYIPTLGSGSSVGHLAEIYVYGTDK
EEEEEEECCCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA