| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349444
Identifier: 29349444
GI number: 29349444
Start: 5247431
End: 5247979
Strand: Reverse
Name: 29349444
Synonym: BT_4036
Alternate gene names: NA
Gene position: 5247979-5247431 (Counterclockwise)
Preceding gene: 29349445
Following gene: 29349443
Centisome position: 83.83
GC content: 40.8
Gene sequence:
>549_bases ATGACATTTGACGATATTACAGGAAGCAAAAAACTGTGGTCTGTACGCCTGGATGGGGAGGAAGATAATGAGTTTCTCAA ATTGTTCTACGATTGGAGTGATGTGATGTGGCTACGGTCGTTTTTCAAAGAAAATATAAACGATTTGAGTGCCTATTTTA AAATTACTGATATCAATCAGGCGATTAAGGATACGATTGAAGACAGCAAGAGATTGAGATGCGTCATTATGGACATATCT CCGGAGGCAGATTTGAGCAGATTGTTTCGACCGCTGGATAATAACCAGGCATCGGATTTTATGCTTCAGAAAGAAAAGGC CCGATTGAAACGTACCATCGGGCATTCGTCCTGGCTGCGTCTTTATGCTATCAAATTGACTTCTGGCGTATACATCATTA CGGGGGGAGCTATCAAACTGACCGCCACCATGCAGGAAAGAGAGCATACAAGAAAGGAACTTGTGAAAATGGATAAGGTC AGACGATATTTGCTGGAAGAGAACATTATTGATGATGACGGGTTTATTGATTATATGAGTGAATTGTAA
Upstream 100 bases:
>100_bases AAGCCTGTATAAAACAATCTTAATTAACTAAAACTGTCAACTTATAAGTTGACAGTTTCGATTCTTTTTCGTATCTTTGT GGAAACAAAACAGGAAAAAT
Downstream 100 bases:
>100_bases TTATAGGAGGTAGATATATGAATGAGAACATGAGAAAGATTGTGGAGAGGCTTGAAAAGCATGCATCTCCAACACCGTCG AAATGGCGTGAAGTGTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MTFDDITGSKKLWSVRLDGEEDNEFLKLFYDWSDVMWLRSFFKENINDLSAYFKITDINQAIKDTIEDSKRLRCVIMDIS PEADLSRLFRPLDNNQASDFMLQKEKARLKRTIGHSSWLRLYAIKLTSGVYIITGGAIKLTATMQEREHTRKELVKMDKV RRYLLEENIIDDDGFIDYMSEL
Sequences:
>Translated_182_residues MTFDDITGSKKLWSVRLDGEEDNEFLKLFYDWSDVMWLRSFFKENINDLSAYFKITDINQAIKDTIEDSKRLRCVIMDIS PEADLSRLFRPLDNNQASDFMLQKEKARLKRTIGHSSWLRLYAIKLTSGVYIITGGAIKLTATMQEREHTRKELVKMDKV RRYLLEENIIDDDGFIDYMSEL >Mature_181_residues TFDDITGSKKLWSVRLDGEEDNEFLKLFYDWSDVMWLRSFFKENINDLSAYFKITDINQAIKDTIEDSKRLRCVIMDISP EADLSRLFRPLDNNQASDFMLQKEKARLKRTIGHSSWLRLYAIKLTSGVYIITGGAIKLTATMQEREHTRKELVKMDKVR RYLLEENIIDDDGFIDYMSEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21466; Mature: 21335
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFDDITGSKKLWSVRLDGEEDNEFLKLFYDWSDVMWLRSFFKENINDLSAYFKITDINQ CCCCCCCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHCHHHHHHHEEEEHHHH AIKDTIEDSKRLRCVIMDISPEADLSRLFRPLDNNQASDFMLQKEKARLKRTIGHSSWLR HHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH LYAIKLTSGVYIITGGAIKLTATMQEREHTRKELVKMDKVRRYLLEENIIDDDGFIDYMS EEEEEECCCEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH EL CC >Mature Secondary Structure TFDDITGSKKLWSVRLDGEEDNEFLKLFYDWSDVMWLRSFFKENINDLSAYFKITDINQ CCCCCCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHCHHHHHHHEEEEHHHH AIKDTIEDSKRLRCVIMDISPEADLSRLFRPLDNNQASDFMLQKEKARLKRTIGHSSWLR HHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH LYAIKLTSGVYIITGGAIKLTATMQEREHTRKELVKMDKVRRYLLEENIIDDDGFIDYMS EEEEEECCCEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH EL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA