| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349426
Identifier: 29349426
GI number: 29349426
Start: 5235315
End: 5235782
Strand: Reverse
Name: 29349426
Synonym: BT_4018
Alternate gene names: NA
Gene position: 5235782-5235315 (Counterclockwise)
Preceding gene: 29349427
Following gene: 29349425
Centisome position: 83.63
GC content: 53.85
Gene sequence:
>468_bases ATGAAAAAAGAACCAAACATTACAGAGCGTCAAGCTCGTGAAATCGTGGAAAAAATGGGGCGCAGGGAACCCTACACCTC CAAGTCGATAGACGACTTCTACAGGAGTATCGGTCTGGAACCGGAGGAGCCGGAACAGCCCGGCAAGACCGTCACGGAAG AAGCAGAAATTCATATGGCAGAAGAACCGTCAGGAGTGGCGAGCGGAGAAGCGGTAATGCCGCAGAAGCGTATCAGTGGC AAACAGCGCAGGCTGTCTTTAGAAGAGTACCGCACCACCTATCTCAAAGTTCCCAAAATTATCAACCGCAAGCCCGTGTT CGTCAGTGAGACGGTGCGTGACGAGTTGGACAGGGTTGTCCGCTACCTCGGAGGGAAGGGCATGAGCGCATCCGGACTTA TAGAGAACCTTGTCCGCCTGCACCTCGAGGCCTACCGGAATGACATCGAGCAATGGCGCAAACTCTGA
Upstream 100 bases:
>100_bases TGCTTGACTGACTGTATTAAAGCACCTTACTTCGCTCCCGATAATCGGTCGAGGTATAGACCAAGACCACATTCAATAAC TTAATCAATTTGTTTTTACA
Downstream 100 bases:
>100_bases CGGGATTACGGTGGAACAGGTTGAGCCGTTGGATGTACTCCATCGGTTCGACCGATACACAAAGTGAGTTATTACACTCG GAAATCAATCCGACAGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MKKEPNITERQAREIVEKMGRREPYTSKSIDDFYRSIGLEPEEPEQPGKTVTEEAEIHMAEEPSGVASGEAVMPQKRISG KQRRLSLEEYRTTYLKVPKIINRKPVFVSETVRDELDRVVRYLGGKGMSASGLIENLVRLHLEAYRNDIEQWRKL
Sequences:
>Translated_155_residues MKKEPNITERQAREIVEKMGRREPYTSKSIDDFYRSIGLEPEEPEQPGKTVTEEAEIHMAEEPSGVASGEAVMPQKRISG KQRRLSLEEYRTTYLKVPKIINRKPVFVSETVRDELDRVVRYLGGKGMSASGLIENLVRLHLEAYRNDIEQWRKL >Mature_155_residues MKKEPNITERQAREIVEKMGRREPYTSKSIDDFYRSIGLEPEEPEQPGKTVTEEAEIHMAEEPSGVASGEAVMPQKRISG KQRRLSLEEYRTTYLKVPKIINRKPVFVSETVRDELDRVVRYLGGKGMSASGLIENLVRLHLEAYRNDIEQWRKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17946; Mature: 17946
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKEPNITERQAREIVEKMGRREPYTSKSIDDFYRSIGLEPEEPEQPGKTVTEEAEIHMA CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCC EEPSGVASGEAVMPQKRISGKQRRLSLEEYRTTYLKVPKIINRKPVFVSETVRDELDRVV CCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RYLGGKGMSASGLIENLVRLHLEAYRNDIEQWRKL HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKEPNITERQAREIVEKMGRREPYTSKSIDDFYRSIGLEPEEPEQPGKTVTEEAEIHMA CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCC EEPSGVASGEAVMPQKRISGKQRRLSLEEYRTTYLKVPKIINRKPVFVSETVRDELDRVV CCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RYLGGKGMSASGLIENLVRLHLEAYRNDIEQWRKL HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA