| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349402
Identifier: 29349402
GI number: 29349402
Start: 5202936
End: 5205167
Strand: Reverse
Name: 29349402
Synonym: BT_3994
Alternate gene names: NA
Gene position: 5205167-5202936 (Counterclockwise)
Preceding gene: 29349403
Following gene: 29349401
Centisome position: 83.14
GC content: 48.79
Gene sequence:
>2232_bases ATGAAAACACCTATTTACCTACTTCTAATCGTTTGTATTTTTGCATCCTGCAACACCAAACAGACACAAGCTGAAATTGA TTACACATCGTATGTAAATCCTTTTATTGGCACCGATTTCACAGGAAACACTTATCCCGGCGCACAAGCCCCCTTCGGTA TGGTGCAGCTCAGCCCGGACAACGGACTTCCGGGATGGGACCGCATCTCCGGCTATTTTTATCCGGACAGCACCATCGCC GGCTTCAGCCATACCCACCTTTCGGGAACAGGTGCAGGCGACTTGTACGACATCTCTTTCATGCCGGTCACACTGCCCTA CAAAGAGGCAGAAGCGCCGCTGGGCATCTACTCCAAGTTTTCTCACGATGAAGAGAGCGCCTATGCAGGCTACTATCAAG TACGTCTGAAAGACTACCATATCAATGTGGAACTGACCGCAACCGAACGTTGTGGCATCCAGCGATACACCTTCCCCAAA GCCGAAGCCGCCATCTTCCTGAATCTGAAGAAAGCCATGAACTGGGACTTCACAAACGATTCGCACATCGAAGTAGTGGA CTCTGTGACGATTCAAGGATACCGTTACTCCGACGGCTGGGCACGCGACCAGCGAATCTACTTCCGCACCCGCTTCTCGA AGCCTTTCGACAAGGTGGAACTGGATACGACTGCCATTATCAAAGACAAGCAACACATCGGTACGGCTGTCATCGCACGT TTTGACTTCCATACCGAAGAAGGAGAACAGATTCTCGTCAATACCGCCATTTCCGGCGTCAGCATGGAAGGCGCAGCCAA GAACCTGCAAGCCGAAGTGCCCGAAAATGACTTCGACAAGTATCTGGCAGAAACAAAAGCAAACTGGAACCGCCAACTGG GAAAGATCGAAGTCGAGGGTGACAATCAAGACGATAAAGTAAACTTTTATACGGCTCTGTACCACTCGATGATCGCACCT ACGATTTACAGTGACGTAGACGGAGCCTATTACGGTCCCGACAAAAAAGTACATCAGAGTGACGGCTGGGTGAATTACAG CACTTTCTCCCTTTGGGATACCTACCGTGCCGCCCATCCCCTTTTCACATATACCGAACCGGAACGTGTCAACGACATGG TAAAATCCTTCATCGCCTTCTTTGAACAGAACGGACGCCTGCCCGTATGGAACTTCTACGGGAGTGAAACCGATATGATG ATCGGCTATCATGCCGTTCCCGTGATTGTAGACGCTTATCTGAAAGGTATAGGCAACTTTGATGCGGAGAAAGCACTGGC CGCCTGCGTAGCTACCGCCAACTTGGATAACTACCGGGGCATCGGGCTATACAAGCAATTAGGCTATATTCCTTACAACG TGACAGATCATTACAATGCCGAAAATTGGTCACTGTCCAAAACACTGGAATATGCATTTGACGATTACTGCATCGCTGAG ATGGCGAACAAGATGGGCAAGAAGGAGATAGCGGACGAATTCTACAAACGTTCTCAGAACTACAAGAATGTTTACAACCC GGCCACTTCGTTCATGCAGCCGCGTGACGATAAAGGAAACTTTATCAAAGACTTCAAAGCCGACGAATACACTCCGCATA TCTGCGAAAGCAACGGCTGGCAATACTTCTGGTCCGTGCAGCATGACATAGATGGTCTGATTGATCTCACAGGAGGTAAA AACCGCTTTGCAGAGAAACTGGACAGCATGTTTACCTACCATCCGGCAGCCGACGAAGAACTTCCCATCTTCAGCACGGG AATGATCGGGCAATATGCTCACGGCAATGAGCCGAGCCATCACGTAATCTATCTCTTCAATGCCGTAGGACAACAGAACC TGACACAGAAATACGTTGCCAAGGTAATGAACGAGCTTTACAAGAACGAGCCTGCCGGTCTTTGCGGAAACGAAGACTGC GGACAAATGTCTGCCTGGTACGTATTCAGCGCGATGGGATTCTATCCCGTCAATCCGGTCAGCGGAAAGTATGAAATAGG TACTCCCCTGTTCCCGGAGATGAAGTTGCATCTGGCTAACGGAAAGACATTTACAGTACTTGCTCCCAAAGTGAGCAAAG AGAATATTTACATTCAATCTATCAAAGTAGACGGTCAACCGTACAACAAGACCTACCTTACCCATGAACAGATTATGAGC GGTACCACCGTCGAATTTGAAATGGGGAATACTCCCTTAGTGGAAGTCGAATTTGAAGAACAGACCCAGTAG
Upstream 100 bases:
>100_bases AACTCAATTATCACAACTTTTTCCTACCTTTGTAAACAGATTAATTATTTTTCTTATCCTTCAAATAATAAAATAAGTAA TCACCAATACCCGTACACCG
Downstream 100 bases:
>100_bases GTCCACCTAAACTAATCTATCGGAAAAATGAATGAAAACTTCGACTTAACCTACAAAGCTCTATTCCGCAGGTACTACCC CAGCCTGATATTCTATGCCA
Product: putative alpha-1,2-mannosidase
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Sugar Hydrolase; Secreted Protein; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Immunoreactive; Exported Alpha-1 2-Mannosidase; Antigen; Alpha-1 2-Mannosidase Protein; Lipoprotein; Mannosidase
Number of amino acids: Translated: 743; Mature: 743
Protein sequence:
>743_residues MKTPIYLLLIVCIFASCNTKQTQAEIDYTSYVNPFIGTDFTGNTYPGAQAPFGMVQLSPDNGLPGWDRISGYFYPDSTIA GFSHTHLSGTGAGDLYDISFMPVTLPYKEAEAPLGIYSKFSHDEESAYAGYYQVRLKDYHINVELTATERCGIQRYTFPK AEAAIFLNLKKAMNWDFTNDSHIEVVDSVTIQGYRYSDGWARDQRIYFRTRFSKPFDKVELDTTAIIKDKQHIGTAVIAR FDFHTEEGEQILVNTAISGVSMEGAAKNLQAEVPENDFDKYLAETKANWNRQLGKIEVEGDNQDDKVNFYTALYHSMIAP TIYSDVDGAYYGPDKKVHQSDGWVNYSTFSLWDTYRAAHPLFTYTEPERVNDMVKSFIAFFEQNGRLPVWNFYGSETDMM IGYHAVPVIVDAYLKGIGNFDAEKALAACVATANLDNYRGIGLYKQLGYIPYNVTDHYNAENWSLSKTLEYAFDDYCIAE MANKMGKKEIADEFYKRSQNYKNVYNPATSFMQPRDDKGNFIKDFKADEYTPHICESNGWQYFWSVQHDIDGLIDLTGGK NRFAEKLDSMFTYHPAADEELPIFSTGMIGQYAHGNEPSHHVIYLFNAVGQQNLTQKYVAKVMNELYKNEPAGLCGNEDC GQMSAWYVFSAMGFYPVNPVSGKYEIGTPLFPEMKLHLANGKTFTVLAPKVSKENIYIQSIKVDGQPYNKTYLTHEQIMS GTTVEFEMGNTPLVEVEFEEQTQ
Sequences:
>Translated_743_residues MKTPIYLLLIVCIFASCNTKQTQAEIDYTSYVNPFIGTDFTGNTYPGAQAPFGMVQLSPDNGLPGWDRISGYFYPDSTIA GFSHTHLSGTGAGDLYDISFMPVTLPYKEAEAPLGIYSKFSHDEESAYAGYYQVRLKDYHINVELTATERCGIQRYTFPK AEAAIFLNLKKAMNWDFTNDSHIEVVDSVTIQGYRYSDGWARDQRIYFRTRFSKPFDKVELDTTAIIKDKQHIGTAVIAR FDFHTEEGEQILVNTAISGVSMEGAAKNLQAEVPENDFDKYLAETKANWNRQLGKIEVEGDNQDDKVNFYTALYHSMIAP TIYSDVDGAYYGPDKKVHQSDGWVNYSTFSLWDTYRAAHPLFTYTEPERVNDMVKSFIAFFEQNGRLPVWNFYGSETDMM IGYHAVPVIVDAYLKGIGNFDAEKALAACVATANLDNYRGIGLYKQLGYIPYNVTDHYNAENWSLSKTLEYAFDDYCIAE MANKMGKKEIADEFYKRSQNYKNVYNPATSFMQPRDDKGNFIKDFKADEYTPHICESNGWQYFWSVQHDIDGLIDLTGGK NRFAEKLDSMFTYHPAADEELPIFSTGMIGQYAHGNEPSHHVIYLFNAVGQQNLTQKYVAKVMNELYKNEPAGLCGNEDC GQMSAWYVFSAMGFYPVNPVSGKYEIGTPLFPEMKLHLANGKTFTVLAPKVSKENIYIQSIKVDGQPYNKTYLTHEQIMS GTTVEFEMGNTPLVEVEFEEQTQ >Mature_743_residues MKTPIYLLLIVCIFASCNTKQTQAEIDYTSYVNPFIGTDFTGNTYPGAQAPFGMVQLSPDNGLPGWDRISGYFYPDSTIA GFSHTHLSGTGAGDLYDISFMPVTLPYKEAEAPLGIYSKFSHDEESAYAGYYQVRLKDYHINVELTATERCGIQRYTFPK AEAAIFLNLKKAMNWDFTNDSHIEVVDSVTIQGYRYSDGWARDQRIYFRTRFSKPFDKVELDTTAIIKDKQHIGTAVIAR FDFHTEEGEQILVNTAISGVSMEGAAKNLQAEVPENDFDKYLAETKANWNRQLGKIEVEGDNQDDKVNFYTALYHSMIAP TIYSDVDGAYYGPDKKVHQSDGWVNYSTFSLWDTYRAAHPLFTYTEPERVNDMVKSFIAFFEQNGRLPVWNFYGSETDMM IGYHAVPVIVDAYLKGIGNFDAEKALAACVATANLDNYRGIGLYKQLGYIPYNVTDHYNAENWSLSKTLEYAFDDYCIAE MANKMGKKEIADEFYKRSQNYKNVYNPATSFMQPRDDKGNFIKDFKADEYTPHICESNGWQYFWSVQHDIDGLIDLTGGK NRFAEKLDSMFTYHPAADEELPIFSTGMIGQYAHGNEPSHHVIYLFNAVGQQNLTQKYVAKVMNELYKNEPAGLCGNEDC GQMSAWYVFSAMGFYPVNPVSGKYEIGTPLFPEMKLHLANGKTFTVLAPKVSKENIYIQSIKVDGQPYNKTYLTHEQIMS GTTVEFEMGNTPLVEVEFEEQTQ
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84336; Mature: 84336
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPIYLLLIVCIFASCNTKQTQAEIDYTSYVNPFIGTDFTGNTYPGAQAPFGMVQLSPD CCCHHHHHHHHHHHHCCCCCCCEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCC NGLPGWDRISGYFYPDSTIAGFSHTHLSGTGAGDLYDISFMPVTLPYKEAEAPLGIYSKF CCCCCHHHCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCHHCCCCCCHHHHC SHDEESAYAGYYQVRLKDYHINVELTATERCGIQRYTFPKAEAAIFLNLKKAMNWDFTND CCCCCCCCCCEEEEEEEEEEEEEEEEEHHCCCCEEECCCCCCEEEEEEEHHHCCCCCCCC SHIEVVDSVTIQGYRYSDGWARDQRIYFRTRFSKPFDKVELDTTAIIKDKQHIGTAVIAR CCEEEEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCEECCEEEEECCHHHHCEEEEEE FDFHTEEGEQILVNTAISGVSMEGAAKNLQAEVPENDFDKYLAETKANWNRQLGKIEVEG EECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECC DNQDDKVNFYTALYHSMIAPTIYSDVDGAYYGPDKKVHQSDGWVNYSTFSLWDTYRAAHP CCCCCCCHHHHHHHHHHHCCHHHHCCCCCEECCCCCEECCCCEEEEEEEEHHHHHHHCCC LFTYTEPERVNDMVKSFIAFFEQNGRLPVWNFYGSETDMMIGYHAVPVIVDAYLKGIGNF CEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHCCCC DAEKALAACVATANLDNYRGIGLYKQLGYIPYNVTDHYNAENWSLSKTLEYAFDDYCIAE CHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHH MANKMGKKEIADEFYKRSQNYKNVYNPATSFMQPRDDKGNFIKDFKADEYTPHICESNGW HHHHHCHHHHHHHHHHHCCCCCHHHCCHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCC QYFWSVQHDIDGLIDLTGGKNRFAEKLDSMFTYHPAADEELPIFSTGMIGQYAHGNEPSH EEEEEEECCCCCEEECCCCCHHHHHHHHHHEEECCCCCCCCCEEECCCCCCCCCCCCCCC HVIYLFNAVGQQNLTQKYVAKVMNELYKNEPAGLCGNEDCGQMSAWYVFSAMGFYPVNPV EEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCC SGKYEIGTPLFPEMKLHLANGKTFTVLAPKVSKENIYIQSIKVDGQPYNKTYLTHEQIMS CCCEECCCCCCCCEEEEEECCCEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEHHHHHC GTTVEFEMGNTPLVEVEFEEQTQ CCEEEEECCCCCEEEEEECCCCC >Mature Secondary Structure MKTPIYLLLIVCIFASCNTKQTQAEIDYTSYVNPFIGTDFTGNTYPGAQAPFGMVQLSPD CCCHHHHHHHHHHHHCCCCCCCEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCC NGLPGWDRISGYFYPDSTIAGFSHTHLSGTGAGDLYDISFMPVTLPYKEAEAPLGIYSKF CCCCCHHHCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCHHCCCCCCHHHHC SHDEESAYAGYYQVRLKDYHINVELTATERCGIQRYTFPKAEAAIFLNLKKAMNWDFTND CCCCCCCCCCEEEEEEEEEEEEEEEEEHHCCCCEEECCCCCCEEEEEEEHHHCCCCCCCC SHIEVVDSVTIQGYRYSDGWARDQRIYFRTRFSKPFDKVELDTTAIIKDKQHIGTAVIAR CCEEEEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCEECCEEEEECCHHHHCEEEEEE FDFHTEEGEQILVNTAISGVSMEGAAKNLQAEVPENDFDKYLAETKANWNRQLGKIEVEG EECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECC DNQDDKVNFYTALYHSMIAPTIYSDVDGAYYGPDKKVHQSDGWVNYSTFSLWDTYRAAHP CCCCCCCHHHHHHHHHHHCCHHHHCCCCCEECCCCCEECCCCEEEEEEEEHHHHHHHCCC LFTYTEPERVNDMVKSFIAFFEQNGRLPVWNFYGSETDMMIGYHAVPVIVDAYLKGIGNF CEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHCCCC DAEKALAACVATANLDNYRGIGLYKQLGYIPYNVTDHYNAENWSLSKTLEYAFDDYCIAE CHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHH MANKMGKKEIADEFYKRSQNYKNVYNPATSFMQPRDDKGNFIKDFKADEYTPHICESNGW HHHHHCHHHHHHHHHHHCCCCCHHHCCHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCC QYFWSVQHDIDGLIDLTGGKNRFAEKLDSMFTYHPAADEELPIFSTGMIGQYAHGNEPSH EEEEEEECCCCCEEECCCCCHHHHHHHHHHEEECCCCCCCCCEEECCCCCCCCCCCCCCC HVIYLFNAVGQQNLTQKYVAKVMNELYKNEPAGLCGNEDCGQMSAWYVFSAMGFYPVNPV EEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCC SGKYEIGTPLFPEMKLHLANGKTFTVLAPKVSKENIYIQSIKVDGQPYNKTYLTHEQIMS CCCEECCCCCCCCEEEEEECCCEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEHHHHHC GTTVEFEMGNTPLVEVEFEEQTQ CCEEEEECCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA