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The map label for this gene is idi [C]

Identifier: 29349380

GI number: 29349380

Start: 5172653

End: 5173195

Strand: Reverse

Name: idi [C]

Synonym: BT_3972

Alternate gene names: 29349380

Gene position: 5173195-5172653 (Counterclockwise)

Preceding gene: 29349381

Following gene: 29349378

Centisome position: 82.63

GC content: 47.7

Gene sequence:

>543_bases
ATGCCAAGCGATAATAATCAAGAAATGTTTCCCATCGTAGACGAACAGGGAAACATCACCGGAGCCGCCACACGCGGAGA
ATGCCATAGCGGAAGCAAGCTCCTTCATCCTGTCATCCATCTTCACGTTTTCAATTCGAAAGGAGATTTATATCTGCAGA
AACGTCCGGAATGGAAAGACATCCAGCCCGGAAAATGGGACACAGCCGTTGGCGGACATATTGACCTGGGCGAAAGCGTA
GAAATCGCACTCAAACGGGAAGTCCGCGAAGAACTAGGCATCACGGACTTTACTCCCGAACTGCTAACCAGCTATGTATT
CGAATCGGATCGTGAGAAAGAACTTGTCTTTGTTCACAAAACTGTTTACGACGGTGAACTGCACCCCAGTGACGAACTGG
ACGGCGGACGATTCTGGACCATCGAAGAAATAGAAGAAAACCTCGGAAAAGGTATTTTCACCCCCAACTTCGAAGGGGAA
TTAAAGAAAGTATCCCTTATTCCGTCTCTTTTCCCTGCTCCTACTCCTGCTCTATCCAAGTAA

Upstream 100 bases:

>100_bases
GGCGCACAATTTATGATTATGCGCTGGCGCACGATTTCCGTTTTCTGAGTTATGGAGATTCTTCTCTGCTGATACCGTAA
ACCAAAAAGTAAAAACAACT

Downstream 100 bases:

>100_bases
CGATTTTTTCCGAGAGCGGACTCTCTTTGGGGGCCACAAAGCCGACCCAGTTTCCGTTCTCGTCAATCATAAACTTCTGA
AAATTCCACTGGACGGGCGC

Product: putative NTP pyrophosphohydrolase

Products: Dimethylallyl diphosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MPSDNNQEMFPIVDEQGNITGAATRGECHSGSKLLHPVIHLHVFNSKGDLYLQKRPEWKDIQPGKWDTAVGGHIDLGESV
EIALKREVREELGITDFTPELLTSYVFESDREKELVFVHKTVYDGELHPSDELDGGRFWTIEEIEENLGKGIFTPNFEGE
LKKVSLIPSLFPAPTPALSK

Sequences:

>Translated_180_residues
MPSDNNQEMFPIVDEQGNITGAATRGECHSGSKLLHPVIHLHVFNSKGDLYLQKRPEWKDIQPGKWDTAVGGHIDLGESV
EIALKREVREELGITDFTPELLTSYVFESDREKELVFVHKTVYDGELHPSDELDGGRFWTIEEIEENLGKGIFTPNFEGE
LKKVSLIPSLFPAPTPALSK
>Mature_179_residues
PSDNNQEMFPIVDEQGNITGAATRGECHSGSKLLHPVIHLHVFNSKGDLYLQKRPEWKDIQPGKWDTAVGGHIDLGESVE
IALKREVREELGITDFTPELLTSYVFESDREKELVFVHKTVYDGELHPSDELDGGRFWTIEEIEENLGKGIFTPNFEGEL
KKVSLIPSLFPAPTPALSK

Specific function: Catalyzes The 1,3-Allylic Rearrangement Of The Homoallylic Substrate Isopentenyl (Ipp) To Its Highly Electrophilic Allylic Isomer, Dimethylallyl Diphosphate (Dmapp). [C]

COG id: COG1443

COG function: function code I; Isopentenyldiphosphate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 5.3.3.2 [C]

Molecular weight: Translated: 20212; Mature: 20081

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSDNNQEMFPIVDEQGNITGAATRGECHSGSKLLHPVIHLHVFNSKGDLYLQKRPEWKD
CCCCCCCEEEEEECCCCCEEEEECCCCCCCCCHHCCEEEEEEEECCCCCEEEEECCCCCC
IQPGKWDTAVGGHIDLGESVEIALKREVREELGITDFTPELLTSYVFESDREKELVFVHK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEE
TVYDGELHPSDELDGGRFWTIEEIEENLGKGIFTPNFEGELKKVSLIPSLFPAPTPALSK
EEECCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
PSDNNQEMFPIVDEQGNITGAATRGECHSGSKLLHPVIHLHVFNSKGDLYLQKRPEWKD
CCCCCCEEEEEECCCCCEEEEECCCCCCCCCHHCCEEEEEEEECCCCCEEEEECCCCCC
IQPGKWDTAVGGHIDLGESVEIALKREVREELGITDFTPELLTSYVFESDREKELVFVHK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEE
TVYDGELHPSDELDGGRFWTIEEIEENLGKGIFTPNFEGELKKVSLIPSLFPAPTPALSK
EEECCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): 0.036 {isopentenyl} [C]

Substrates: Isopentenyl diphosphate [C]

Specific reaction: Isopentenyl diphosphate --> Dimethylallyl diphosphate [C]

General reaction: Intramolecular oxidoreduction; Isomerization [C]

Inhibitor: Iodoacetamide; PCMB [C]

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]