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The map label for this gene is ydhJ [C]

Identifier: 29349376

GI number: 29349376

Start: 5164810

End: 5165739

Strand: Reverse

Name: ydhJ [C]

Synonym: BT_3968

Alternate gene names: 29349376

Gene position: 5165739-5164810 (Counterclockwise)

Preceding gene: 29349377

Following gene: 29349375

Centisome position: 82.52

GC content: 50.86

Gene sequence:

>930_bases
ATGAGAAAGATATTTTACCCCATCCTTCTGCTCGCCTTAATAGCTTGCAAGGGACAACAACAAACGGCGGATTCAGAGTC
TGTGGCGGACCCTGCAACAGAAAGCGTGAATCCGGAAATGGGAAAAAACAATGGTCAAAGCGACGCCGATGCCACTGCAC
AGCCCGAAGTGGATGCAATCACTTCCGCCACTTCCCGCCCCAATCAGGTTTCGTTCAACGGCCGGATCGTCCTTCCGCCC
CAACGGCAGGCAACCGTCGCACTGACTATCGGCGGAGTGATCAAAAACACTTCCTTACTCCCCGGACAACACGTTACCAA
GAACTCTGTAATCGCCACTTTGGAGAATCCGGAGTTTATCACCCTCCAACAGACTTATCTGGACAGCCACGCACAAACAG
AATATCTGCGTATGGAATACGAACGGCAAAAGAATCTCTCTGCCGAACAAGCGGCTTCGCAGAAGAAGTTCCAGCAAAGC
AAAGCGGATTATCTTTCGATGAAAAGCCGTCAGGATGCTGCCGCCGCACAACTTTCGCTTTTGGGCGTGAATCCGGAAAC
ACTGCTTCGGGATGGCATCCAGCCGCTTCTGGAAGTAAAAGCTCCTATCAGCGGATATGTGGTCAATGTAGCTATGAACA
TGGGAAAGTACATCAATCCGGGAGAAGCTCTCTGCGAAGTGATCGATAAAAGCGCACCGATGCTCTGCCTGACTACCTAC
GAAAAAGACCTTGCAGATATGCAAACAGGCAGTCCCGTACAATTCCGTGTCAACGGCATGGGTACACAAACGTTCAACGG
CACGGTCATCTCCATCGGACAAAAAGTGGACGAAGTGAACCGCTCACTCGAAGTATACGCTTCCATCAAGGAGACGAATC
CGCAGTTCCGACCGGGGATGTACGTCACGGCACATATCCAAAAACAATAA

Upstream 100 bases:

>100_bases
ATGAATTGTTTGAATAAGTGGAGAGTGGAGAGTTTTAATGAACAGTTTTCCTGTTAATATAGAAGATTATTTTGCAAGAG
TACTTAATATAAAAATGTGT

Downstream 100 bases:

>100_bases
TCTGCCGTGCAGCGACAGCCATTCATCATGCATAATTCGTAATTAACCATTATCTTTGCAACATGGTATTGAAAGCTATC
AATAAAGATAAGTATTTCCT

Product: cation efflux system protein

Products: NA

Alternate protein names: Cation Efflux System Protein; RND Family Efflux Transporter MFP Subunit; Secretion Protein HlyD; Efflux Transporter Rnd Family Mfp Subunit; HlyD Family Secretion Protein; Cation Efflux System Protein CzcB-Like Protein; Cation Efflux System Membrane Protein; CzcB Family Heavy Metal Efflux Protein; Heavy Metal Efflux Pump; Membrane Fusion Efflux Protein; RND Family Heavy Metal Efflux Transporter MFP Subunit; Cobalt-Zinc-Cadmium Resistance Protein; Secretion Protein Putative RND Family Efflux Protein; Cation Efflux System Protein CzcB Or CusB Protein; Heavy Metal Efflux Pump Czcb Family; Cobalt-Zinc-Cadmium Resistance Protein CzcB; Nickel-Cobalt Resistance Protein; Membrane-Fusion Protein; Lipoprotein

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MRKIFYPILLLALIACKGQQQTADSESVADPATESVNPEMGKNNGQSDADATAQPEVDAITSATSRPNQVSFNGRIVLPP
QRQATVALTIGGVIKNTSLLPGQHVTKNSVIATLENPEFITLQQTYLDSHAQTEYLRMEYERQKNLSAEQAASQKKFQQS
KADYLSMKSRQDAAAAQLSLLGVNPETLLRDGIQPLLEVKAPISGYVVNVAMNMGKYINPGEALCEVIDKSAPMLCLTTY
EKDLADMQTGSPVQFRVNGMGTQTFNGTVISIGQKVDEVNRSLEVYASIKETNPQFRPGMYVTAHIQKQ

Sequences:

>Translated_309_residues
MRKIFYPILLLALIACKGQQQTADSESVADPATESVNPEMGKNNGQSDADATAQPEVDAITSATSRPNQVSFNGRIVLPP
QRQATVALTIGGVIKNTSLLPGQHVTKNSVIATLENPEFITLQQTYLDSHAQTEYLRMEYERQKNLSAEQAASQKKFQQS
KADYLSMKSRQDAAAAQLSLLGVNPETLLRDGIQPLLEVKAPISGYVVNVAMNMGKYINPGEALCEVIDKSAPMLCLTTY
EKDLADMQTGSPVQFRVNGMGTQTFNGTVISIGQKVDEVNRSLEVYASIKETNPQFRPGMYVTAHIQKQ
>Mature_309_residues
MRKIFYPILLLALIACKGQQQTADSESVADPATESVNPEMGKNNGQSDADATAQPEVDAITSATSRPNQVSFNGRIVLPP
QRQATVALTIGGVIKNTSLLPGQHVTKNSVIATLENPEFITLQQTYLDSHAQTEYLRMEYERQKNLSAEQAASQKKFQQS
KADYLSMKSRQDAAAAQLSLLGVNPETLLRDGIQPLLEVKAPISGYVVNVAMNMGKYINPGEALCEVIDKSAPMLCLTTY
EKDLADMQTGSPVQFRVNGMGTQTFNGTVISIGQKVDEVNRSLEVYASIKETNPQFRPGMYVTAHIQKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33756; Mature: 33756

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIFYPILLLALIACKGQQQTADSESVADPATESVNPEMGKNNGQSDADATAQPEVDAI
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
TSATSRPNQVSFNGRIVLPPQRQATVALTIGGVIKNTSLLPGQHVTKNSVIATLENPEFI
HHCCCCCCEEECCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEE
TLQQTYLDSHAQTEYLRMEYERQKNLSAEQAASQKKFQQSKADYLSMKSRQDAAAAQLSL
EEEHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEE
LGVNPETLLRDGIQPLLEVKAPISGYVVNVAMNMGKYINPGEALCEVIDKSAPMLCLTTY
ECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECC
EKDLADMQTGSPVQFRVNGMGTQTFNGTVISIGQKVDEVNRSLEVYASIKETNPQFRPGM
HHHHHHCCCCCCEEEEEECCCCEECCCEEEECCHHHHHHCCCEEEEEEHHHCCCCCCCCE
YVTAHIQKQ
EEEEEEECC
>Mature Secondary Structure
MRKIFYPILLLALIACKGQQQTADSESVADPATESVNPEMGKNNGQSDADATAQPEVDAI
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
TSATSRPNQVSFNGRIVLPPQRQATVALTIGGVIKNTSLLPGQHVTKNSVIATLENPEFI
HHCCCCCCEEECCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEE
TLQQTYLDSHAQTEYLRMEYERQKNLSAEQAASQKKFQQSKADYLSMKSRQDAAAAQLSL
EEEHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEE
LGVNPETLLRDGIQPLLEVKAPISGYVVNVAMNMGKYINPGEALCEVIDKSAPMLCLTTY
ECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECC
EKDLADMQTGSPVQFRVNGMGTQTFNGTVISIGQKVDEVNRSLEVYASIKETNPQFRPGM
HHHHHHCCCCCCEEEEEECCCCEECCCEEEECCHHHHHHCCCEEEEEEHHHCCCCCCCCE
YVTAHIQKQ
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA