Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
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Accession | NC_004663 |
Length | 6,260,361 |
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The map label for this gene is 29346704
Identifier: 29346704
GI number: 29346704
Start: 1613195
End: 1614856
Strand: Reverse
Name: 29346704
Synonym: BT_1294
Alternate gene names: NA
Gene position: 1614856-1613195 (Counterclockwise)
Preceding gene: 29346705
Following gene: 29346703
Centisome position: 25.79
GC content: 44.46
Gene sequence:
>1662_bases ATGGTAAAAGATTTATTAACCCCCGATTATATCTTCGAGTCCAGCTGGGAAGTATGTAATAAAGTGGGAGGGATATACAC CGTATTGTCGACACGGGCGAATACATTGCAGGAAAAATTCCGCGACAGAATTTTTTTCATAGGTCCTGATGTGTGGCAAG GAAAAGAGAACCCTCTATTCATCGAGTCGGATAATCTGTGCGCTGACTGGAAAAAGCACGCATTCAAAAACGATCATCTT TCCGTCCGTGTAGGACGATGGAATATACCCGGTGAACCCATTGTCATCCTTGTTGATTTCCAACCTTTTTTTGAACAGAA GAACGAAATTTACACAGAAATGTGGAATCGTTTTCAAGTAGACTCGTTGCACGCTTATGGCGATTACGACGAGGCTTCGA TGTTTTCGTATGCTGCCGGAAAAGTAGTAGAGAGTTTCTACCGCTACAACCTGACAGAAACGGATAAGGTGGTATATCAG GCACATGAATGGATGACCGGAATGGGAGCACTTTATGTACAGGAAGCTGTCCCCGAAGTGGCTACTATTTTTACAACCCA CGCTACTTCCATCGGACGTTCGATAGCCGGCAATCATAAGCCGCTGTATGACTATCTGTTTGCTTATAACGGTGACCAGA TGGCGCAGGAACTGAATATGCAGTCAAAGCACTCTATTGAGAAGCAGACGGCGCATTATGTAGACTGTTTTACGACAGTA AGTGAAATCACGAATAACGAGTGCAAGGAATTGCTCGACAAACCGGCAGACGTAGTACTGATGAACGGTTTCGAAGACGA TTTCGTACCTAAAGGCAGTACATTTACCGGAAAACGTAAACGTGCCCGCTCATTGATGTTGAACGTAGCCAATAAATTGT TGGGAACAAATCTGGATGACGATACGTTAATTATCGGTACCAGTGGTCGATATGAATTCAAGAACAAGGGTATTGACGTA TTCCTGGAGTCATTGAACCGTCTGAACAGGGATAAAAAGCTCCATAAGAACGTATTGGCGTTTATCAATGTCCCCGGTTG GGTAGGAGATCCCCGTGAAGACTTGCAGGAACGTCTGAAAAGCAAAGAAAAATTTGATACACCGCTTGAAGTTCCTTTCA TCACTCATTGGCTGCACAATATGACGCATGACCAAGTGCTGGATATGCTGAAATATCTGGGGATGGGCAACCGTCCCGAT GATAAAGTAAAGGTGATTTTTGTGCCTTGCTATCTGGACGGGCGTGATGGTATCCTGAATAAAGAGTATTATGATATATT GCTGGGACAGGATTTGAGTGTATATGCTTCCTATTACGAACCGTGGGGATATACTCCGCTGGAAAGTGTAGCGTTCCGTG TGCCTACCATTACTACTGATCTGGCAGGTTTTGGCCTTTGGGTGAACAGCCTGAAGAATCAGCATGGCATCAATGATGGA GTGGAAGTGCTGCATCGTTCGGACTATAATGATTCGGAAGTGGCGGATGGCATCAAAGATACGATTACGCTGTTTGCAGA TAAGTCGGAAAAAGAAGTGAAGGAGATCCGTAAGCATGCGGCAGATGTTGCAGAGCAGGCATTGTGGAAACACTTCATTC AATATTATTACGAGGCTTATGATATTGCCTTGCGCAATGCCATGAAGCGTCAGTTAGGCTAA
Upstream 100 bases:
>100_bases TTTCCTCTTATTAACTCATATTTTTCGCATAAAGTATTATTTTTCAAAGAATAATGCGTACTTTTGCACTCGCATACTAA AAAGAGTTTTAATATATTAT
Downstream 100 bases:
>100_bases AGAAATATTTTATTATCAATAAGTAAACAAAAACATTATGAAAATTAAAGTTAGTAATGTGAATACTCCGAACTGGAAAG AGGTTACAGTGAAGTCACGT
Product: glycogen [starch] synthase, glycosyltransferase
Products: NA
Alternate protein names: Alpha-Glucan Phosphorylase; Glycogen(Starch) Synthase; Glycosyltransferase Family Alpha-Glycosyltransferase; Glycogen Synthase Glycosyltransferase Family 3 Protein; Glycogen Synthase Family Protein; Glycogen Synthase /Glycogen Phosphorylase; Carbohydrate Phosphorylase Family Protein
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MVKDLLTPDYIFESSWEVCNKVGGIYTVLSTRANTLQEKFRDRIFFIGPDVWQGKENPLFIESDNLCADWKKHAFKNDHL SVRVGRWNIPGEPIVILVDFQPFFEQKNEIYTEMWNRFQVDSLHAYGDYDEASMFSYAAGKVVESFYRYNLTETDKVVYQ AHEWMTGMGALYVQEAVPEVATIFTTHATSIGRSIAGNHKPLYDYLFAYNGDQMAQELNMQSKHSIEKQTAHYVDCFTTV SEITNNECKELLDKPADVVLMNGFEDDFVPKGSTFTGKRKRARSLMLNVANKLLGTNLDDDTLIIGTSGRYEFKNKGIDV FLESLNRLNRDKKLHKNVLAFINVPGWVGDPREDLQERLKSKEKFDTPLEVPFITHWLHNMTHDQVLDMLKYLGMGNRPD DKVKVIFVPCYLDGRDGILNKEYYDILLGQDLSVYASYYEPWGYTPLESVAFRVPTITTDLAGFGLWVNSLKNQHGINDG VEVLHRSDYNDSEVADGIKDTITLFADKSEKEVKEIRKHAADVAEQALWKHFIQYYYEAYDIALRNAMKRQLG
Sequences:
>Translated_553_residues MVKDLLTPDYIFESSWEVCNKVGGIYTVLSTRANTLQEKFRDRIFFIGPDVWQGKENPLFIESDNLCADWKKHAFKNDHL SVRVGRWNIPGEPIVILVDFQPFFEQKNEIYTEMWNRFQVDSLHAYGDYDEASMFSYAAGKVVESFYRYNLTETDKVVYQ AHEWMTGMGALYVQEAVPEVATIFTTHATSIGRSIAGNHKPLYDYLFAYNGDQMAQELNMQSKHSIEKQTAHYVDCFTTV SEITNNECKELLDKPADVVLMNGFEDDFVPKGSTFTGKRKRARSLMLNVANKLLGTNLDDDTLIIGTSGRYEFKNKGIDV FLESLNRLNRDKKLHKNVLAFINVPGWVGDPREDLQERLKSKEKFDTPLEVPFITHWLHNMTHDQVLDMLKYLGMGNRPD DKVKVIFVPCYLDGRDGILNKEYYDILLGQDLSVYASYYEPWGYTPLESVAFRVPTITTDLAGFGLWVNSLKNQHGINDG VEVLHRSDYNDSEVADGIKDTITLFADKSEKEVKEIRKHAADVAEQALWKHFIQYYYEAYDIALRNAMKRQLG >Mature_553_residues MVKDLLTPDYIFESSWEVCNKVGGIYTVLSTRANTLQEKFRDRIFFIGPDVWQGKENPLFIESDNLCADWKKHAFKNDHL SVRVGRWNIPGEPIVILVDFQPFFEQKNEIYTEMWNRFQVDSLHAYGDYDEASMFSYAAGKVVESFYRYNLTETDKVVYQ AHEWMTGMGALYVQEAVPEVATIFTTHATSIGRSIAGNHKPLYDYLFAYNGDQMAQELNMQSKHSIEKQTAHYVDCFTTV SEITNNECKELLDKPADVVLMNGFEDDFVPKGSTFTGKRKRARSLMLNVANKLLGTNLDDDTLIIGTSGRYEFKNKGIDV FLESLNRLNRDKKLHKNVLAFINVPGWVGDPREDLQERLKSKEKFDTPLEVPFITHWLHNMTHDQVLDMLKYLGMGNRPD DKVKVIFVPCYLDGRDGILNKEYYDILLGQDLSVYASYYEPWGYTPLESVAFRVPTITTDLAGFGLWVNSLKNQHGINDG VEVLHRSDYNDSEVADGIKDTITLFADKSEKEVKEIRKHAADVAEQALWKHFIQYYYEAYDIALRNAMKRQLG
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI31542868, Length=595, Percent_Identity=28.5714285714286, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI119372286, Length=593, Percent_Identity=28.8364249578415, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI239049591, Length=452, Percent_Identity=28.9823008849558, Blast_Score=179, Evalue=8e-45, Organism=Caenorhabditis elegans, GI17537175, Length=593, Percent_Identity=27.9932546374368, Blast_Score=229, Evalue=3e-60, Organism=Saccharomyces cerevisiae, GI6323287, Length=626, Percent_Identity=28.594249201278, Blast_Score=219, Evalue=8e-58, Organism=Saccharomyces cerevisiae, GI6321127, Length=635, Percent_Identity=27.4015748031496, Blast_Score=208, Evalue=2e-54, Organism=Drosophila melanogaster, GI45551893, Length=528, Percent_Identity=27.2727272727273, Blast_Score=212, Evalue=5e-55, Organism=Drosophila melanogaster, GI21357845, Length=528, Percent_Identity=27.2727272727273, Blast_Score=212, Evalue=5e-55, Organism=Drosophila melanogaster, GI24646982, Length=528, Percent_Identity=27.2727272727273, Blast_Score=212, Evalue=5e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63696; Mature: 63696
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKDLLTPDYIFESSWEVCNKVGGIYTVLSTRANTLQEKFRDRIFFIGPDVWQGKENPLF CCCCCCCCHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEE IESDNLCADWKKHAFKNDHLSVRVGRWNIPGEPIVILVDFQPFFEQKNEIYTEMWNRFQV EECCCCHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCC DSLHAYGDYDEASMFSYAAGKVVESFYRYNLTETDKVVYQAHEWMTGMGALYVQEAVPEV CCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ATIFTTHATSIGRSIAGNHKPLYDYLFAYNGDQMAQELNMQSKHSIEKQTAHYVDCFTTV HHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SEITNNECKELLDKPADVVLMNGFEDDFVPKGSTFTGKRKRARSLMLNVANKLLGTNLDD HHHCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC DTLIIGTSGRYEFKNKGIDVFLESLNRLNRDKKLHKNVLAFINVPGWVGDPREDLQERLK CEEEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHEEEEECCCCCCCCHHHHHHHHH SKEKFDTPLEVPFITHWLHNMTHDQVLDMLKYLGMGNRPDDKVKVIFVPCYLDGRDGILN HHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCC KEYYDILLGQDLSVYASYYEPWGYTPLESVAFRVPTITTDLAGFGLWVNSLKNQHGINDG CHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHEECCCHHHHHHHHHHHHHHHHHCCCCCHH VEVLHRSDYNDSEVADGIKDTITLFADKSEKEVKEIRKHAADVAEQALWKHFIQYYYEAY HHHHHCCCCCHHHHHCCHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIALRNAMKRQLG HHHHHHHHHHHCC >Mature Secondary Structure MVKDLLTPDYIFESSWEVCNKVGGIYTVLSTRANTLQEKFRDRIFFIGPDVWQGKENPLF CCCCCCCCHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEE IESDNLCADWKKHAFKNDHLSVRVGRWNIPGEPIVILVDFQPFFEQKNEIYTEMWNRFQV EECCCCHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCC DSLHAYGDYDEASMFSYAAGKVVESFYRYNLTETDKVVYQAHEWMTGMGALYVQEAVPEV CCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ATIFTTHATSIGRSIAGNHKPLYDYLFAYNGDQMAQELNMQSKHSIEKQTAHYVDCFTTV HHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SEITNNECKELLDKPADVVLMNGFEDDFVPKGSTFTGKRKRARSLMLNVANKLLGTNLDD HHHCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC DTLIIGTSGRYEFKNKGIDVFLESLNRLNRDKKLHKNVLAFINVPGWVGDPREDLQERLK CEEEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHEEEEECCCCCCCCHHHHHHHHH SKEKFDTPLEVPFITHWLHNMTHDQVLDMLKYLGMGNRPDDKVKVIFVPCYLDGRDGILN HHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCC KEYYDILLGQDLSVYASYYEPWGYTPLESVAFRVPTITTDLAGFGLWVNSLKNQHGINDG CHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHEECCCHHHHHHHHHHHHHHHHHCCCCCHH VEVLHRSDYNDSEVADGIKDTITLFADKSEKEVKEIRKHAADVAEQALWKHFIQYYYEAY HHHHHCCCCCHHHHHCCHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIALRNAMKRQLG HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA