| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is glgP [H]
Identifier: 29346510
GI number: 29346510
Start: 1386673
End: 1389231
Strand: Reverse
Name: glgP [H]
Synonym: BT_1100
Alternate gene names: 29346510
Gene position: 1389231-1386673 (Counterclockwise)
Preceding gene: 29346511
Following gene: 29346509
Centisome position: 22.19
GC content: 46.74
Gene sequence:
>2559_bases ATGGAATATTCAAGTTATAATGTAAATACCCCTCAGTGGAGGGAGATTACAGTAGGTTCACATCTTCCTGCAGAACTGCG AAAACTTGCAGAAATCGCACATAATCTCTGGTGGACATGGAATGATGACGCAAAGAAACTGTATTGTGATTTGGATTCGG AACTTTGGAAAGAGGTGGAACAGAATCCGGTATTGTTTCTGGAGCGGATAAATTATGAGAAGCTTGTAGCGCTGGCACAT GATGAGAACTTTGTCTATAAAATGGATGCCGTCTATTCCGCCTTCAAAAAATACGTAGATGTGGAACCGGATCACCAGCG CCCGTCAATAGCTTATTTCAGCATGGAATACGGCTTGGATGAAGTCCTTAAGATATATTCCGGCGGTTTGGGAATGTTGG CGGGGGATTACCTGAAAGAGGCGTCGGACAGCAATGTGGACCTTTGTGCCATAGGACTTTTGTACCGTTACGGTTATTTT GACCAGTCGCTTTCCATGGACGGCCAGCAGACAGTCAATTATAAAGCGCAGAATTTCGGGCAGCTCCCGATTGAAAAGGT AATGCAACCGGATGGGAAACAACTGGTAATCCACGTCCCCTATGCCGACAGTTTTGTGGTACATGCCAATGTCTGGAAAG CCAGTGTGGGGCGTATTCCCCTTTATCTGCTGGATACGGACAATGAACTCAACAGTGAGTTTGACCGCCCTATCACTCAC CATCTGTATGGAGGCGACTGGGAGAATCGGCTAAAACAGGAAATACTGCTTGGCATAGGCGGGATGATAACGCTGAGAGC TTTAGGTATAACGAAAGATGTATATCACTGTAATGAGGGGCATGCCGCACTGATCAATATCCAGCGGCTTTGTGATTACA TAAATGGCGGCTTGAATTTCGGGCAGGCCATGGAGCTGGTACGTGCTTCCTCACTTTATACCGTACATACTCCCGTACCC GCTGGTCATGATTATTTTGACGAAGGGCTTTTCAATAAATATATGAAGGGATATCCTGGCAAGTTGGGTATAACCTGGGA TAACCTGATGGATCTCGGGCGTCACAATCCGGGAGACAAGGAGGAACGTTTCTGCATGTCTGTCTTCGCCTGCAAGACCT GCCAGGAGGTAAACGGTGTCAGCAAGTTGCATAAATCGGTATCCCAGCAAATGTTTGCGCCGATCTGGAAGGGATACTTC CCGGAAGAGAACCATGTGGGTTATGTAACCAACGGGGTACATCTGCCTACCTGGTGTGCGGCAGAATGGAAAAAGCTTTT CAAGGACAATTTTGATGAGAATTTTTTCTGCGACCAGTCCAATCAGAAAATCTGGGAGGCCGTCTATGGCATCCCGGATG AAGAGATATGGAATACCCGGTTAAAACAGAAAGCAAAATTGCTGGACTATATCAAAAGCAAATGCAGCAAGGACTGGCTC AGGACTCAGATTGATCCGGCATTGAGCGTTTCCATTTTTGAGAGATTCAATCCCGATGCTCTTCTAATAGGCTTCGGACG CCGTTTTGCTACATATAAGAGGGCTCATCTTCTGTTCACGGATATAGACCGACTTGCCAGGATTGTGAATAATCCGAAAT ATCCGGTACAGTTCATCTTTGCAGGCAAAGCCCATCCCAATGACGGTGCCGGGCAGGGGCTGATCAAGCAAATCGTGGAA ATATCCCGGCGTCCGGAATTTTTAGGTAAAATCATATTCTTGGAGAATTACGACATGGACCTGGCACGCCATCTTATCTC GGGGGTGGATATTTGGATGAACACCCCTACGCGGTTGGCAGAAGCTTCGGGTACGTCGGGCGAGAAGGCATTGATGAACG GTGTGCTTAATTTCTCCGTGCTGGACGGTTGGTGGTATGAAGGATACCGTAAGGATGCTGGATGGGCACTGACTGATAAA AGGACTTATCAGAATGAACAGTACCAAAACCAGCTGGATGCCGAAGCCATCTATTATTTGTTGGAGCATGACATCCTGCC ACTGTATTACGAGCATGGGGGGAAGAACTATTCGGAAGACTGGGTCAAGTATATCAAGAACTCAATCGCACAAATCGCTC CCCATTTTACCATGAAAAGACAGTTGGACGACTACTATGACAGGTTCTATAACAAACTGTCAGAGCATTTCCACATTCTG GCAGCCGACAACTTTGCGAAGGCGAAAATGATGGCTGACTGGAAAGCAAACGTCCGAAGCAGATGGGATGCCATAGAAAT CAAATCCATAGAGGCAGGGAATGGGCTGAATGCCACGGTTGAAGCCGGAAAGGAATATGAGGTGACGGTTGTCGTTGATG AGAAAGGCCTGGATGACGCAATCGGAATAGAATCGGTCATTATCAGGCGTGAAGACGGTCAGGATCACATATATGAGGTT ATTCCCCTTTTGCCGGTTTCCAAGAATGGGAATTTATATACCTTTAAGGCGACATCCGGCATTTTCAACGCTGGAAGCTT CAAGCAGGCCTTCCGTATGTATCCCAAGAATGCTTTGTTACCTCACCGACAAGATTTCTGTTATGTACGATGGTTTTAA
Upstream 100 bases:
>100_bases TGATACAATTTTCAAGGAGAATGATACGGTATGGATTGTCGGTAAACGAAAAATAATAAAAGGACTGAATAAAGATTAGG ACTTATTTAATTAAAATGTC
Downstream 100 bases:
>100_bases TGAACAGTAAAAGGATATGCAAAAACAACGTATGAGCGGGCAAAATCAAAAAACAGATAAACGGATAGCATGGCCGATCA TCATCATGAACTTCACGGGA
Product: alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 852; Mature: 852
Protein sequence:
>852_residues MEYSSYNVNTPQWREITVGSHLPAELRKLAEIAHNLWWTWNDDAKKLYCDLDSELWKEVEQNPVLFLERINYEKLVALAH DENFVYKMDAVYSAFKKYVDVEPDHQRPSIAYFSMEYGLDEVLKIYSGGLGMLAGDYLKEASDSNVDLCAIGLLYRYGYF DQSLSMDGQQTVNYKAQNFGQLPIEKVMQPDGKQLVIHVPYADSFVVHANVWKASVGRIPLYLLDTDNELNSEFDRPITH HLYGGDWENRLKQEILLGIGGMITLRALGITKDVYHCNEGHAALINIQRLCDYINGGLNFGQAMELVRASSLYTVHTPVP AGHDYFDEGLFNKYMKGYPGKLGITWDNLMDLGRHNPGDKEERFCMSVFACKTCQEVNGVSKLHKSVSQQMFAPIWKGYF PEENHVGYVTNGVHLPTWCAAEWKKLFKDNFDENFFCDQSNQKIWEAVYGIPDEEIWNTRLKQKAKLLDYIKSKCSKDWL RTQIDPALSVSIFERFNPDALLIGFGRRFATYKRAHLLFTDIDRLARIVNNPKYPVQFIFAGKAHPNDGAGQGLIKQIVE ISRRPEFLGKIIFLENYDMDLARHLISGVDIWMNTPTRLAEASGTSGEKALMNGVLNFSVLDGWWYEGYRKDAGWALTDK RTYQNEQYQNQLDAEAIYYLLEHDILPLYYEHGGKNYSEDWVKYIKNSIAQIAPHFTMKRQLDDYYDRFYNKLSEHFHIL AADNFAKAKMMADWKANVRSRWDAIEIKSIEAGNGLNATVEAGKEYEVTVVVDEKGLDDAIGIESVIIRREDGQDHIYEV IPLLPVSKNGNLYTFKATSGIFNAGSFKQAFRMYPKNALLPHRQDFCYVRWF
Sequences:
>Translated_852_residues MEYSSYNVNTPQWREITVGSHLPAELRKLAEIAHNLWWTWNDDAKKLYCDLDSELWKEVEQNPVLFLERINYEKLVALAH DENFVYKMDAVYSAFKKYVDVEPDHQRPSIAYFSMEYGLDEVLKIYSGGLGMLAGDYLKEASDSNVDLCAIGLLYRYGYF DQSLSMDGQQTVNYKAQNFGQLPIEKVMQPDGKQLVIHVPYADSFVVHANVWKASVGRIPLYLLDTDNELNSEFDRPITH HLYGGDWENRLKQEILLGIGGMITLRALGITKDVYHCNEGHAALINIQRLCDYINGGLNFGQAMELVRASSLYTVHTPVP AGHDYFDEGLFNKYMKGYPGKLGITWDNLMDLGRHNPGDKEERFCMSVFACKTCQEVNGVSKLHKSVSQQMFAPIWKGYF PEENHVGYVTNGVHLPTWCAAEWKKLFKDNFDENFFCDQSNQKIWEAVYGIPDEEIWNTRLKQKAKLLDYIKSKCSKDWL RTQIDPALSVSIFERFNPDALLIGFGRRFATYKRAHLLFTDIDRLARIVNNPKYPVQFIFAGKAHPNDGAGQGLIKQIVE ISRRPEFLGKIIFLENYDMDLARHLISGVDIWMNTPTRLAEASGTSGEKALMNGVLNFSVLDGWWYEGYRKDAGWALTDK RTYQNEQYQNQLDAEAIYYLLEHDILPLYYEHGGKNYSEDWVKYIKNSIAQIAPHFTMKRQLDDYYDRFYNKLSEHFHIL AADNFAKAKMMADWKANVRSRWDAIEIKSIEAGNGLNATVEAGKEYEVTVVVDEKGLDDAIGIESVIIRREDGQDHIYEV IPLLPVSKNGNLYTFKATSGIFNAGSFKQAFRMYPKNALLPHRQDFCYVRWF >Mature_852_residues MEYSSYNVNTPQWREITVGSHLPAELRKLAEIAHNLWWTWNDDAKKLYCDLDSELWKEVEQNPVLFLERINYEKLVALAH DENFVYKMDAVYSAFKKYVDVEPDHQRPSIAYFSMEYGLDEVLKIYSGGLGMLAGDYLKEASDSNVDLCAIGLLYRYGYF DQSLSMDGQQTVNYKAQNFGQLPIEKVMQPDGKQLVIHVPYADSFVVHANVWKASVGRIPLYLLDTDNELNSEFDRPITH HLYGGDWENRLKQEILLGIGGMITLRALGITKDVYHCNEGHAALINIQRLCDYINGGLNFGQAMELVRASSLYTVHTPVP AGHDYFDEGLFNKYMKGYPGKLGITWDNLMDLGRHNPGDKEERFCMSVFACKTCQEVNGVSKLHKSVSQQMFAPIWKGYF PEENHVGYVTNGVHLPTWCAAEWKKLFKDNFDENFFCDQSNQKIWEAVYGIPDEEIWNTRLKQKAKLLDYIKSKCSKDWL RTQIDPALSVSIFERFNPDALLIGFGRRFATYKRAHLLFTDIDRLARIVNNPKYPVQFIFAGKAHPNDGAGQGLIKQIVE ISRRPEFLGKIIFLENYDMDLARHLISGVDIWMNTPTRLAEASGTSGEKALMNGVLNFSVLDGWWYEGYRKDAGWALTDK RTYQNEQYQNQLDAEAIYYLLEHDILPLYYEHGGKNYSEDWVKYIKNSIAQIAPHFTMKRQLDDYYDRFYNKLSEHFHIL AADNFAKAKMMADWKANVRSRWDAIEIKSIEAGNGLNATVEAGKEYEVTVVVDEKGLDDAIGIESVIIRREDGQDHIYEV IPLLPVSKNGNLYTFKATSGIFNAGSFKQAFRMYPKNALLPHRQDFCYVRWF
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI21361370, Length=361, Percent_Identity=23.5457063711911, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI255653002, Length=422, Percent_Identity=24.8815165876777, Blast_Score=75, Evalue=4e-13, Organism=Homo sapiens, GI71037379, Length=422, Percent_Identity=24.8815165876777, Blast_Score=75, Evalue=4e-13, Organism=Escherichia coli, GI2367228, Length=293, Percent_Identity=27.6450511945392, Blast_Score=74, Evalue=5e-14, Organism=Escherichia coli, GI48994936, Length=570, Percent_Identity=22.6315789473684, Blast_Score=67, Evalue=4e-12, Organism=Caenorhabditis elegans, GI32566204, Length=581, Percent_Identity=23.0636833046472, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17564550, Length=581, Percent_Identity=23.0636833046472, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 98134; Mature: 98134
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYSSYNVNTPQWREITVGSHLPAELRKLAEIAHNLWWTWNDDAKKLYCDLDSELWKEVE CCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCEEECCCCEEEEECCCHHHHHHHC QNPVLFLERINYEKLVALAHDENFVYKMDAVYSAFKKYVDVEPDHQRPSIAYFSMEYGLD CCCEEEEECCCHHHEEEEEECCCEEEEHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHCHH EVLKIYSGGLGMLAGDYLKEASDSNVDLCAIGLLYRYGYFDQSLSMDGQQTVNYKAQNFG HHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHCCC QLPIEKVMQPDGKQLVIHVPYADSFVVHANVWKASVGRIPLYLLDTDNELNSEFDRPITH CCCHHHHHCCCCCEEEEECCCCCCEEEEEEHHHHCCCCCEEEEEECCCHHHHHHCCCHHH HLYGGDWENRLKQEILLGIGGMITLRALGITKDVYHCNEGHAALINIQRLCDYINGGLNF HCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHEECCCCCEEEEEHHHHHHHHHCCCCH GQAMELVRASSLYTVHTPVPAGHDYFDEGLFNKYMKGYPGKLGITWDNLMDLGRHNPGDK HHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCH EERFCMSVFACKTCQEVNGVSKLHKSVSQQMFAPIWKGYFPEENHVGYVTNGVHLPTWCA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEECCCHHH AEWKKLFKDNFDENFFCDQSNQKIWEAVYGIPDEEIWNTRLKQKAKLLDYIKSKCSKDWL HHHHHHHHCCCCCCEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RTQIDPALSVSIFERFNPDALLIGFGRRFATYKRAHLLFTDIDRLARIVNNPKYPVQFIF HHHCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE AGKAHPNDGAGQGLIKQIVEISRRPEFLGKIIFLENYDMDLARHLISGVDIWMNTPTRLA ECCCCCCCCCCHHHHHHHHHHHCCHHHHEEEEEEECCCHHHHHHHHCCCCEEECCCHHHH EASGTSGEKALMNGVLNFSVLDGWWYEGYRKDAGWALTDKRTYQNEQYQNQLDAEAIYYL HCCCCCCHHHHHHHHHEEEEECCHHHCCEECCCCEEECCCHHHCCHHHHHHHHHHHHHHH LEHDILPLYYEHGGKNYSEDWVKYIKNSIAQIAPHFTMKRQLDDYYDRFYNKLSEHFHIL HHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEE AADNFAKAKMMADWKANVRSRWDAIEIKSIEAGNGLNATVEAGKEYEVTVVVDEKGLDDA EECCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCCEEEEEEEECCCCCCH IGIESVIIRREDGQDHIYEVIPLLPVSKNGNLYTFKATSGIFNAGSFKQAFRMYPKNALL HCCEEEEEECCCCHHHHHHHHHCEEECCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCC PHRQDFCYVRWF CCCCCEEEEEEC >Mature Secondary Structure MEYSSYNVNTPQWREITVGSHLPAELRKLAEIAHNLWWTWNDDAKKLYCDLDSELWKEVE CCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCEEECCCCEEEEECCCHHHHHHHC QNPVLFLERINYEKLVALAHDENFVYKMDAVYSAFKKYVDVEPDHQRPSIAYFSMEYGLD CCCEEEEECCCHHHEEEEEECCCEEEEHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHCHH EVLKIYSGGLGMLAGDYLKEASDSNVDLCAIGLLYRYGYFDQSLSMDGQQTVNYKAQNFG HHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHCCC QLPIEKVMQPDGKQLVIHVPYADSFVVHANVWKASVGRIPLYLLDTDNELNSEFDRPITH CCCHHHHHCCCCCEEEEECCCCCCEEEEEEHHHHCCCCCEEEEEECCCHHHHHHCCCHHH HLYGGDWENRLKQEILLGIGGMITLRALGITKDVYHCNEGHAALINIQRLCDYINGGLNF HCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHEECCCCCEEEEEHHHHHHHHHCCCCH GQAMELVRASSLYTVHTPVPAGHDYFDEGLFNKYMKGYPGKLGITWDNLMDLGRHNPGDK HHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCH EERFCMSVFACKTCQEVNGVSKLHKSVSQQMFAPIWKGYFPEENHVGYVTNGVHLPTWCA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEECCCHHH AEWKKLFKDNFDENFFCDQSNQKIWEAVYGIPDEEIWNTRLKQKAKLLDYIKSKCSKDWL HHHHHHHHCCCCCCEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RTQIDPALSVSIFERFNPDALLIGFGRRFATYKRAHLLFTDIDRLARIVNNPKYPVQFIF HHHCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE AGKAHPNDGAGQGLIKQIVEISRRPEFLGKIIFLENYDMDLARHLISGVDIWMNTPTRLA ECCCCCCCCCCHHHHHHHHHHHCCHHHHEEEEEEECCCHHHHHHHHCCCCEEECCCHHHH EASGTSGEKALMNGVLNFSVLDGWWYEGYRKDAGWALTDKRTYQNEQYQNQLDAEAIYYL HCCCCCCHHHHHHHHHEEEEECCHHHCCEECCCCEEECCCHHHCCHHHHHHHHHHHHHHH LEHDILPLYYEHGGKNYSEDWVKYIKNSIAQIAPHFTMKRQLDDYYDRFYNKLSEHFHIL HHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEE AADNFAKAKMMADWKANVRSRWDAIEIKSIEAGNGLNATVEAGKEYEVTVVVDEKGLDDA EECCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCCEEEEEEEECCCCCCH IGIESVIIRREDGQDHIYEVIPLLPVSKNGNLYTFKATSGIFNAGSFKQAFRMYPKNALL HCCEEEEEECCCCHHHHHHHHHCEEECCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCC PHRQDFCYVRWF CCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]