| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346443
Identifier: 29346443
GI number: 29346443
Start: 1302372
End: 1303340
Strand: Reverse
Name: 29346443
Synonym: BT_1033
Alternate gene names: NA
Gene position: 1303340-1302372 (Counterclockwise)
Preceding gene: 29346444
Following gene: 29346442
Centisome position: 20.82
GC content: 43.34
Gene sequence:
>969_bases ATGAATAAGATTCAAATTCCCTGGGAAGAACGTCCTGTCGGATGTACAGATGTAATGTGGCGTTACTCGCAAAATCCGGT CATCGGACGCTATCATATTCCTTCATCCAATAGTATTTTCAACAGTGCTGTCGTACCTTTCAAAGATGGATTCGCCGGCG TATTCCGTTGTGACAACAAAGCTGTACAGATGAACATCTTCACAGGATTCAGTAAAGATGGTATTCATTGGGATATTAGT CATGAACCGATTCAGTTCAAAGCCGGTAACACGGAAATGATTGAATCCGAATATAAATATGACCCGCGTGTTACGTGGAT TGAAGACCGTTATTGGGTAACTTGGTGCAACGGCTATCATGGACCTACTATCGGTATTGCCTATACATTTGATTTTGTAG ATTTCTTCCAATGCGAGAATGCTTTCCTGCCTTTCAATCGTAATGGAGTACTTTTCCCGCAAAAGATAGATGGCAAATAT GCTATGTTAAGTCGCCCCAGCGACAATGGACATACACCGTTCGGTGATATTTATATCAGCTACAGTCCGGATATGAAATA CTGGGGTGAACACCGTTGTGTCATGAAAGTAACTCCTTTCCCTGAAAGTGCCTGGCAGTGTACCAAGATTGGTGCAGGTT CGGTACCTTTCCTTACTGATGAAGGCTGGTTGCTTTTCTATCATGGTGTTATCACTACTTGCAACGGTTTCCGTTATGCA ATGGGTTCGGCGATACTCGATAAGGATCATCCCGAAAAGGTACTTTATCGTACCCGTGAATATCTGATAGGTCCGGCTGC ACCTTATGAACTTCAAGGGGATGTGCCCAATGTGGTATTCCCATGTGCGGCATTGCAGGATGGTGAGCGTGTAGCTGTTT ATTATGGAGCTGCAGATACCGTTGTAGGAATGGCTTTCGGCTATATCCAGGAAATAATTGATTTTACAAAACGAACGAGC ATTATCTAA
Upstream 100 bases:
>100_bases ACCTATTTTATACCTTTTACGTATGATGATTCAAAAAAGAAAAAATAAATTGCTATTTTTGAGTGATAATAGATAACCAA TTACTAAATAAATAATTATT
Downstream 100 bases:
>100_bases GAAGGATATGAGACGTATATTATTAACTTGCACACTGGCTTTCACCCTTCTCCCCGTATTTGGGGGAGAGGGTAAGGCCC CCCCTATGGATAAGGAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosidase Related Protein; Glycosylase; Glycosidase-Like Protein; Conserved Domain Protein; Glycosidase-Related; Glycosidase-Related Protein; Cytoplasmic Protein; Glycosylase-Like Protein; Unknwon Conserved Protein
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MNKIQIPWEERPVGCTDVMWRYSQNPVIGRYHIPSSNSIFNSAVVPFKDGFAGVFRCDNKAVQMNIFTGFSKDGIHWDIS HEPIQFKAGNTEMIESEYKYDPRVTWIEDRYWVTWCNGYHGPTIGIAYTFDFVDFFQCENAFLPFNRNGVLFPQKIDGKY AMLSRPSDNGHTPFGDIYISYSPDMKYWGEHRCVMKVTPFPESAWQCTKIGAGSVPFLTDEGWLLFYHGVITTCNGFRYA MGSAILDKDHPEKVLYRTREYLIGPAAPYELQGDVPNVVFPCAALQDGERVAVYYGAADTVVGMAFGYIQEIIDFTKRTS II
Sequences:
>Translated_322_residues MNKIQIPWEERPVGCTDVMWRYSQNPVIGRYHIPSSNSIFNSAVVPFKDGFAGVFRCDNKAVQMNIFTGFSKDGIHWDIS HEPIQFKAGNTEMIESEYKYDPRVTWIEDRYWVTWCNGYHGPTIGIAYTFDFVDFFQCENAFLPFNRNGVLFPQKIDGKY AMLSRPSDNGHTPFGDIYISYSPDMKYWGEHRCVMKVTPFPESAWQCTKIGAGSVPFLTDEGWLLFYHGVITTCNGFRYA MGSAILDKDHPEKVLYRTREYLIGPAAPYELQGDVPNVVFPCAALQDGERVAVYYGAADTVVGMAFGYIQEIIDFTKRTS II >Mature_322_residues MNKIQIPWEERPVGCTDVMWRYSQNPVIGRYHIPSSNSIFNSAVVPFKDGFAGVFRCDNKAVQMNIFTGFSKDGIHWDIS HEPIQFKAGNTEMIESEYKYDPRVTWIEDRYWVTWCNGYHGPTIGIAYTFDFVDFFQCENAFLPFNRNGVLFPQKIDGKY AMLSRPSDNGHTPFGDIYISYSPDMKYWGEHRCVMKVTPFPESAWQCTKIGAGSVPFLTDEGWLLFYHGVITTCNGFRYA MGSAILDKDHPEKVLYRTREYLIGPAAPYELQGDVPNVVFPCAALQDGERVAVYYGAADTVVGMAFGYIQEIIDFTKRTS II
Specific function: Unknown
COG id: COG2152
COG function: function code G; Predicted glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36759; Mature: 36759
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIQIPWEERPVGCTDVMWRYSQNPVIGRYHIPSSNSIFNSAVVPFKDGFAGVFRCDNK CCCCCCCCCCCCCCHHHHHEEECCCCEEEEEECCCCCCCCCCEECCCCCCCEEEEEECCC AVQMNIFTGFSKDGIHWDISHEPIQFKAGNTEMIESEYKYDPRVTWIEDRYWVTWCNGYH EEEEEEEECCCCCCEEEECCCCCEEEECCCHHEEHHHCCCCCEEEEEECCEEEEEECCCC GPTIGIAYTFDFVDFFQCENAFLPFNRNGVLFPQKIDGKYAMLSRPSDNGHTPFGDIYIS CCEEEEEEEECHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEEEE YSPDMKYWGEHRCVMKVTPFPESAWQCTKIGAGSVPFLTDEGWLLFYHGVITTCNGFRYA ECCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCEEECCCEEEEEECCHHCCCCCHHH MGSAILDKDHPEKVLYRTREYLIGPAAPYELQGDVPNVVFPCAALQDGERVAVYYGAADT HCCHHCCCCCHHHHHHHHHHHEECCCCCCEECCCCCCEEEEEHCCCCCCEEEEEECCHHH VVGMAFGYIQEIIDFTKRTSII HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKIQIPWEERPVGCTDVMWRYSQNPVIGRYHIPSSNSIFNSAVVPFKDGFAGVFRCDNK CCCCCCCCCCCCCCHHHHHEEECCCCEEEEEECCCCCCCCCCEECCCCCCCEEEEEECCC AVQMNIFTGFSKDGIHWDISHEPIQFKAGNTEMIESEYKYDPRVTWIEDRYWVTWCNGYH EEEEEEEECCCCCCEEEECCCCCEEEECCCHHEEHHHCCCCCEEEEEECCEEEEEECCCC GPTIGIAYTFDFVDFFQCENAFLPFNRNGVLFPQKIDGKYAMLSRPSDNGHTPFGDIYIS CCEEEEEEEECHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEEEE YSPDMKYWGEHRCVMKVTPFPESAWQCTKIGAGSVPFLTDEGWLLFYHGVITTCNGFRYA ECCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCEEECCCEEEEEECCHHCCCCCHHH MGSAILDKDHPEKVLYRTREYLIGPAAPYELQGDVPNVVFPCAALQDGERVAVYYGAADT HCCHHCCCCCHHHHHHHHHHHEECCCCCCEECCCCCCEEEEEHCCCCCCEEEEEECCHHH VVGMAFGYIQEIIDFTKRTSII HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA