| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346442
Identifier: 29346442
GI number: 29346442
Start: 1300094
End: 1302364
Strand: Reverse
Name: 29346442
Synonym: BT_1032
Alternate gene names: NA
Gene position: 1302364-1300094 (Counterclockwise)
Preceding gene: 29346443
Following gene: 29346441
Centisome position: 20.8
GC content: 42.62
Gene sequence:
>2271_bases ATGAGACGTATATTATTAACTTGCACACTGGCTTTCACCCTTCTCCCCGTATTTGGGGGAGAGGGTAAGGCCCCCCCTAT GGATAAGGAAAAGAGTCTGTTGATAGACTATGTAGATCCTTTTATTGGAACGACAAACTTCGGCACCACCAATCCCGGAG CTGTTTGCCCGAATGGAATGATGTCCGTAGTACCTTTTAATGTGATGGGTTCTGCCGATAATACATACGATAAAGATGCA CGTTGGTGGTCGACGCCTTATGAACATACCAATTGTTTCTTTACAGGATATTCTCATGTGAATCTGAGTGGTGTCGGTTG TCCTGAACTGGGTTCTTTATTGCTGATGCCTACTACCGGAGAACTGAATGTAGACTATAAGGAATATGGGAGCAAATATA AGGATGAACAGGCTTCTCCCGGCTATTATTCCAATTATTTGACGAAGTATAATATAAAGACAGAAGTCTCTGCTACTCCG CGTACAGGTATTGCCCGTTTCACTTTTCCTAAAGGAGAGAGTCATATACTTCTGAATTTGGGCGAAGGCCTGACCAATGA GAGTGGAGCCATGCTTCGTCGTGTAAGTGACAGCGAAATAGAGGGAATGAAACTATTGGGTACTTTCTGTTATAATCCCC AAGCTGTATTTCCCATCTATTTTGTGATGAGAGTGAACAAAGTTCCCGCCACAACCGGATATTGGAAAAAGCAACGTCCG ATGACAGGTGTGGAAGCAGAATGGGATCGCGACCAAGGCAAATATAAATTGTATACCCGCTATGGAAAAGAAATAGCAGG TGACGATGTGGGCGCTTACTTCACTTTTGAAACAGAAGAAGGAGAACAGGTCGAAGTACAGATGGGAGTTTCCTTTGTAA GCATAGAGAATGCCCGTTTGAATCTGGATAAAGAACAGTCGGGAAAAAACTTTGAACAGGTGCTTTCCGATGCCCGTGCA CAGTGGAACGATGACTTGTCACGTATCACTGTAGAAGGAGGAACGGATGCACAGAAAACAGTTTTTTATACGGCACTTTA TCATTTGTTGATTCATCCGAACGTTCTGCAGGATGTAAATGGTGAATATCCGGCTATGGAGAGCGATCAGATTCTGACAA CGAAAGGTACCCGATATACTGTATTCTCTTTGTGGGATACATATCGTAACGTACATCAGCTTTTGACTTTGGTTTATCCC GAACGTCAGATGGAAATGGTACGTACCATGCTCGATATGTATCGTGAACATGGTTGGTTCCCTAAATGGGAATTGTATGG AAGAGAGACTCTTACGATGGAAGGTGATCCAAGTATCCCAGTGATTGTGGATACATGGATGAAAGGATTGCGTGACTTTG ACGTAGATCTGGCTTATGAAGCTATGTACAAGTCGGCTACATTACCCGGGGCGGAAAATCTGATGCGTCCGGACAATGAT GACTATATGTCAAAAGGATACGTGCCGCTTCGTGAACAATATGATAACTCCGTATCTCATGCACTGGAATATTATATCGC AGACTTTGCCCTTTCCCGTTTTGCGGATGCTTTAGGAAAGAAGAAAGATGCGGAAATGTTCTATAAACGCTCTTTGGGAT ATAAGCATTATTATAGTAAGGAGTTCGGTACATTCCGACCTATTCTTCCGGACGGAACTTTCTACAGTCCGTTCAATCCG AGGCAGGGAGAGAACTTTGAACCGAATCCCGGTTTCCACGAAGGTAATTCTTGGAATTATACTTTCTATGTACCACATGA TGTATATGGATTGGCTAAACTGATGGGTGGAAAGAAACCTTTTGTCAATAAGCTGCAAATGGTGTTTGATGAAGGACTAT ATGATCCGGCTAACGAACCGGATATTGCTTACGCTCATCTGTTCTCTTACTTTAAAGGTGAAGAATGGCGTACACAGAAA GAGACACAGCGACTGCTGGATAAGTACTTTACGACCAAACCGGACGGTATCCCTGGAAATGATGACACAGGTACGATGTC TGCATGGGCTATTTTCAATATGATAGGTTTTTATCCCGACTGTCCGGGATTGCCGGAATATGCATTGACTACTCCGGTAT TTAATAAAGTAACGATCCGCTTGGATCCTAAATGGTATAAGGAAAATGAGCTGGTAATTGAGAGTAATCGTACCGGATCG GAAACTCTTTATATAAATAAGGTGTTATTGGATGGTAAGAAGTTCAATAAATACCGCATTACCCACGATGAACTTGTTCA TGGTAAACGCTTGATATTTGATTTGAAATAA
Upstream 100 bases:
>100_bases GTTTATTATGGAGCTGCAGATACCGTTGTAGGAATGGCTTTCGGCTATATCCAGGAAATAATTGATTTTACAAAACGAAC GAGCATTATCTAAGAAGGAT
Downstream 100 bases:
>100_bases CACACAGTGTTTCATAGGTATCGTTTTTGGGTTGACAAGGCTGTCGGACTTTTCAGGGTTCGGCAGCCTATTTTTTTTAC ATCTTACCTGAATAATCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Sugar Hydrolase; Glycosyl Hydrolase Family; Glycoside Hydrolase Family Protein; Secreted Protein; Outer Membrane Protein; Immunoreactive; Exported Alpha-1 2-Mannosidase; Antigen; Alpha-1 2-Mannosidase Protein; Lipoprotein
Number of amino acids: Translated: 756; Mature: 756
Protein sequence:
>756_residues MRRILLTCTLAFTLLPVFGGEGKAPPMDKEKSLLIDYVDPFIGTTNFGTTNPGAVCPNGMMSVVPFNVMGSADNTYDKDA RWWSTPYEHTNCFFTGYSHVNLSGVGCPELGSLLLMPTTGELNVDYKEYGSKYKDEQASPGYYSNYLTKYNIKTEVSATP RTGIARFTFPKGESHILLNLGEGLTNESGAMLRRVSDSEIEGMKLLGTFCYNPQAVFPIYFVMRVNKVPATTGYWKKQRP MTGVEAEWDRDQGKYKLYTRYGKEIAGDDVGAYFTFETEEGEQVEVQMGVSFVSIENARLNLDKEQSGKNFEQVLSDARA QWNDDLSRITVEGGTDAQKTVFYTALYHLLIHPNVLQDVNGEYPAMESDQILTTKGTRYTVFSLWDTYRNVHQLLTLVYP ERQMEMVRTMLDMYREHGWFPKWELYGRETLTMEGDPSIPVIVDTWMKGLRDFDVDLAYEAMYKSATLPGAENLMRPDND DYMSKGYVPLREQYDNSVSHALEYYIADFALSRFADALGKKKDAEMFYKRSLGYKHYYSKEFGTFRPILPDGTFYSPFNP RQGENFEPNPGFHEGNSWNYTFYVPHDVYGLAKLMGGKKPFVNKLQMVFDEGLYDPANEPDIAYAHLFSYFKGEEWRTQK ETQRLLDKYFTTKPDGIPGNDDTGTMSAWAIFNMIGFYPDCPGLPEYALTTPVFNKVTIRLDPKWYKENELVIESNRTGS ETLYINKVLLDGKKFNKYRITHDELVHGKRLIFDLK
Sequences:
>Translated_756_residues MRRILLTCTLAFTLLPVFGGEGKAPPMDKEKSLLIDYVDPFIGTTNFGTTNPGAVCPNGMMSVVPFNVMGSADNTYDKDA RWWSTPYEHTNCFFTGYSHVNLSGVGCPELGSLLLMPTTGELNVDYKEYGSKYKDEQASPGYYSNYLTKYNIKTEVSATP RTGIARFTFPKGESHILLNLGEGLTNESGAMLRRVSDSEIEGMKLLGTFCYNPQAVFPIYFVMRVNKVPATTGYWKKQRP MTGVEAEWDRDQGKYKLYTRYGKEIAGDDVGAYFTFETEEGEQVEVQMGVSFVSIENARLNLDKEQSGKNFEQVLSDARA QWNDDLSRITVEGGTDAQKTVFYTALYHLLIHPNVLQDVNGEYPAMESDQILTTKGTRYTVFSLWDTYRNVHQLLTLVYP ERQMEMVRTMLDMYREHGWFPKWELYGRETLTMEGDPSIPVIVDTWMKGLRDFDVDLAYEAMYKSATLPGAENLMRPDND DYMSKGYVPLREQYDNSVSHALEYYIADFALSRFADALGKKKDAEMFYKRSLGYKHYYSKEFGTFRPILPDGTFYSPFNP RQGENFEPNPGFHEGNSWNYTFYVPHDVYGLAKLMGGKKPFVNKLQMVFDEGLYDPANEPDIAYAHLFSYFKGEEWRTQK ETQRLLDKYFTTKPDGIPGNDDTGTMSAWAIFNMIGFYPDCPGLPEYALTTPVFNKVTIRLDPKWYKENELVIESNRTGS ETLYINKVLLDGKKFNKYRITHDELVHGKRLIFDLK >Mature_756_residues MRRILLTCTLAFTLLPVFGGEGKAPPMDKEKSLLIDYVDPFIGTTNFGTTNPGAVCPNGMMSVVPFNVMGSADNTYDKDA RWWSTPYEHTNCFFTGYSHVNLSGVGCPELGSLLLMPTTGELNVDYKEYGSKYKDEQASPGYYSNYLTKYNIKTEVSATP RTGIARFTFPKGESHILLNLGEGLTNESGAMLRRVSDSEIEGMKLLGTFCYNPQAVFPIYFVMRVNKVPATTGYWKKQRP MTGVEAEWDRDQGKYKLYTRYGKEIAGDDVGAYFTFETEEGEQVEVQMGVSFVSIENARLNLDKEQSGKNFEQVLSDARA QWNDDLSRITVEGGTDAQKTVFYTALYHLLIHPNVLQDVNGEYPAMESDQILTTKGTRYTVFSLWDTYRNVHQLLTLVYP ERQMEMVRTMLDMYREHGWFPKWELYGRETLTMEGDPSIPVIVDTWMKGLRDFDVDLAYEAMYKSATLPGAENLMRPDND DYMSKGYVPLREQYDNSVSHALEYYIADFALSRFADALGKKKDAEMFYKRSLGYKHYYSKEFGTFRPILPDGTFYSPFNP RQGENFEPNPGFHEGNSWNYTFYVPHDVYGLAKLMGGKKPFVNKLQMVFDEGLYDPANEPDIAYAHLFSYFKGEEWRTQK ETQRLLDKYFTTKPDGIPGNDDTGTMSAWAIFNMIGFYPDCPGLPEYALTTPVFNKVTIRLDPKWYKENELVIESNRTGS ETLYINKVLLDGKKFNKYRITHDELVHGKRLIFDLK
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86622; Mature: 86622
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRILLTCTLAFTLLPVFGGEGKAPPMDKEKSLLIDYVDPFIGTTNFGTTNPGAVCPNGM CCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCC MSVVPFNVMGSADNTYDKDARWWSTPYEHTNCFFTGYSHVNLSGVGCPELGSLLLMPTTG EEEECEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCEEEEECCC ELNVDYKEYGSKYKDEQASPGYYSNYLTKYNIKTEVSATPRTGIARFTFPKGESHILLNL CCCCCHHHHCCCCCCCCCCCCHHHCCEEEEEEEEECCCCCCCCEEEEECCCCCCEEEEEC GEGLTNESGAMLRRVSDSEIEGMKLLGTFCYNPQAVFPIYFVMRVNKVPATTGYWKKQRP CCCCCCCCCHHHHHCCCCCCCCEEEEEEHHCCCCHHHEEEEEEEECCCCCCCCCCCCCCC MTGVEAEWDRDQGKYKLYTRYGKEIAGDDVGAYFTFETEEGEQVEVQMGVSFVSIENARL CCCCCCCCCCCCCCEEEEEHHCCHHCCCCCCEEEEEECCCCCEEEEEECEEEEEEECCEE NLDKEQSGKNFEQVLSDARAQWNDDLSRITVEGGTDAQKTVFYTALYHLLIHPNVLQDVN CCCHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHCC GEYPAMESDQILTTKGTRYTVFSLWDTYRNVHQLLTLVYPERQMEMVRTMLDMYREHGWF CCCCCCCCCCEEEECCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC PKWELYGRETLTMEGDPSIPVIVDTWMKGLRDFDVDLAYEAMYKSATLPGAENLMRPDND CCEEECCCEEEEECCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHCCCCCCC DYMSKGYVPLREQYDNSVSHALEYYIADFALSRFADALGKKKDAEMFYKRSLGYKHYYSK CHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHCC EFGTFRPILPDGTFYSPFNPRQGENFEPNPGFHEGNSWNYTFYVPHDVYGLAKLMGGKKP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHCCCCH FVNKLQMVFDEGLYDPANEPDIAYAHLFSYFKGEEWRTQKETQRLLDKYFTTKPDGIPGN HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC DDTGTMSAWAIFNMIGFYPDCPGLPEYALTTPVFNKVTIRLDPKWYKENELVIESNRTGS CCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCEEEEEECCCEECCCEEEEECCCCCC ETLYINKVLLDGKKFNKYRITHDELVHGKRLIFDLK CEEEEEEEEECCCCCCEEECCHHHHHCCCEEEEECC >Mature Secondary Structure MRRILLTCTLAFTLLPVFGGEGKAPPMDKEKSLLIDYVDPFIGTTNFGTTNPGAVCPNGM CCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCC MSVVPFNVMGSADNTYDKDARWWSTPYEHTNCFFTGYSHVNLSGVGCPELGSLLLMPTTG EEEECEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCEEEEECCC ELNVDYKEYGSKYKDEQASPGYYSNYLTKYNIKTEVSATPRTGIARFTFPKGESHILLNL CCCCCHHHHCCCCCCCCCCCCHHHCCEEEEEEEEECCCCCCCCEEEEECCCCCCEEEEEC GEGLTNESGAMLRRVSDSEIEGMKLLGTFCYNPQAVFPIYFVMRVNKVPATTGYWKKQRP CCCCCCCCCHHHHHCCCCCCCCEEEEEEHHCCCCHHHEEEEEEEECCCCCCCCCCCCCCC MTGVEAEWDRDQGKYKLYTRYGKEIAGDDVGAYFTFETEEGEQVEVQMGVSFVSIENARL CCCCCCCCCCCCCCEEEEEHHCCHHCCCCCCEEEEEECCCCCEEEEEECEEEEEEECCEE NLDKEQSGKNFEQVLSDARAQWNDDLSRITVEGGTDAQKTVFYTALYHLLIHPNVLQDVN CCCHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHCC GEYPAMESDQILTTKGTRYTVFSLWDTYRNVHQLLTLVYPERQMEMVRTMLDMYREHGWF CCCCCCCCCCEEEECCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC PKWELYGRETLTMEGDPSIPVIVDTWMKGLRDFDVDLAYEAMYKSATLPGAENLMRPDND CCEEECCCEEEEECCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHCCCCCCC DYMSKGYVPLREQYDNSVSHALEYYIADFALSRFADALGKKKDAEMFYKRSLGYKHYYSK CHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHCC EFGTFRPILPDGTFYSPFNPRQGENFEPNPGFHEGNSWNYTFYVPHDVYGLAKLMGGKKP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHCCCCH FVNKLQMVFDEGLYDPANEPDIAYAHLFSYFKGEEWRTQKETQRLLDKYFTTKPDGIPGN HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC DDTGTMSAWAIFNMIGFYPDCPGLPEYALTTPVFNKVTIRLDPKWYKENELVIESNRTGS CCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCEEEEEECCCEECCCEEEEECCCCCC ETLYINKVLLDGKKFNKYRITHDELVHGKRLIFDLK CEEEEEEEEECCCCCCEEECCHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA