| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346434
Identifier: 29346434
GI number: 29346434
Start: 1283613
End: 1285910
Strand: Reverse
Name: 29346434
Synonym: BT_1024
Alternate gene names: NA
Gene position: 1285910-1283613 (Counterclockwise)
Preceding gene: 29346435
Following gene: 29346433
Centisome position: 20.54
GC content: 36.81
Gene sequence:
>2298_bases ATGTTTCATTTTAATAATTTGAATACAATGATGAAGAAAATAAATAAGTATGGTTCAATTGCATTACTGACCATAACAGC TGCCATCTTTACAGGTTGTAGTGATCAATTTTTGGAAGACAAAAAATTATATGGAAGTTTTAACGGTACGACTATTTATG AAAACTATGAGTCAGCTGATAACCGTATAGCTTACTTGTATTATATCATGCTGCCGAGTGCGACGGGTGGATCTGATCTG ACTGGTTCTATGGGTGATATGCCAAGCACAGGAACAAGTGATCAATATTCGAAATGTACAGAAGAATATGGAGGGATATC AGGTTTGATGAATCCTAATTCTCCTCTAGATTATGAAACTGTTACTGATTATTTTAATCTAGATAACAATTATTCTCCTT GGGTGCGTATTCGTGAGTGTAATGATATGATCGAAGGAGTGATTGGCAGTGAAAGTTTAACTGAACGCCAAAAGCAGTTA TTGTTGGGACAAGCATTTTTCTTCCGTGCATGGCGTTATTATTTAATGGTAATGATGTATGGTGGTGTACCTATTATTGA TAATGTACAAAATCCTATAATTGGAGATAGTGAAGGTATTCATTTGGTAGTTCCACGCTCGTCTACAAAAGAATGTATTG ATTTTATTTGCAAAGATTTGCAAACAGCTGCTGATTATCTGCCAGCACGTTGGGAGTCAGAAAATAAGAATTTTGGACGC ATAACATCGGGGGCAGCATTGGCTTTAAAAGGTCGTGTGGAATTGTTATATGCCAGTCCGCTTTTTAATAGGGCGGATGA TGTTACACGATGGGAAACTGCATATCAAACAAACTTAGCTGCTGTAAAAAAACTGGAAGAAGGTAATTTTGGATTGGCTT ATGAAAACAATTCAGGAAAGAATGCAGCAGGTTGGGGAAAGATATTCTCCGATTATATTGGCTCAGAAGGTGGTGGAGGA ACTGTTTCTGAGGCAGTATTAGTAACTTTATATAATAATGTATCACCAGCCGAGCACTTACAGCTTGAAAAATGGAATGG ATGGGAACATTCTCTTCGCCCAGCTAATGCTGGAGGTGGGGGTGGTATGACTCCCACTGCAGAAATGGTTGATCTTTTTC CAATGGCGGATGGGAAGAAACCAAATGACATGAATGGATCTTATGATTATAATCAAGAACTTTTCTTTTTAAACCGCGAT CCAAGATTTTATCGCACTTTTGCGTTCCCTGGTGTAGAATGGAAGTTTGATAGTGATGACTTGAAATCTTTTGGTGAAAA AGGTCAATTACCTTATGGCATTAATGGGTATACTACAGGGAATAATTACAAGTTGTGGAATTATTGTTGGTATGATAATG TAGATGATCGTAATAGTAACTCTAAGTCAGGCTATGCAGCTGATTGTCTAGGTACCAAAAATACGGGGATTTATTTGCGT AAGCGTACAGATGATTTAGCACTCAATTCTAATCCTTTATATATCTTTGAAAAGACTTCAGGTAATGGATTCAGACAGTC TGCTGCTCCATATATGGAAATACGTTTTGCCGAAGTATTATTGAATTATGCGGAGGCTGCTTGTGGGGCAAATCATTTTG ACGAGGCAGTGAATGCTCTTAAACGAATTCGTAAGCGTGTAGGATATACAGATAATTGTGGATTAGATCCAGCTATTTTT AATGATCGTGCCAAACTATTTGAGGCTATACTTTATGAACGTCAAATAGAACTTGCTTATGAAGGTAAACGTTTCCACGA TGTGCGACGTTGGATGTTATTTGATGGTGGAGTGGGCCAAGAAGCACTGAAATCGACTTGGAAACTTACAGGTTTTAATG GCAATACATGTAACTATTTAGGAGTTGAACCATTGAATGGTCAGAGAAGACATCGGATTGAGGTTTATGCAAAAAATTTT ATTGCTGCTAAAAGTAATAATGTCTACAATGAAGATAAAACAATAAAAGAAACCTATGATGAATTATGGAATAAACGTCC GACAGCATTAAGTTTGACTGAAGATATAACTTGTACAGAATCAGCCGATGATGAAATAACATATGCAGATGCAAAGGTAA AGGCATTGGCTCAGTTTTATCAAGAACATTTTAAACGTAAAAATCTTAGTACTGACGGTAATGATGAAACTATTCTTCCA ACATTTAAACCTTATTATTATATCTTAGGTTTTAAGAAGAATGCGATGCAAAACAATGTGTCATTAGAACAAAATATAGG ATGGGGCGACTATTGGAGAGGTGGAGCTGATGGTACCTTTGATCCTTTGGCAGAGTGA
Upstream 100 bases:
>100_bases GTATTTAACTTCCTAAACCCTTATCCAGAAGGAGCATGGGCTTCTTGGGCGGGAAGCTATGGATATTATCCGAACTTACG TAAATTCACGTTAGGTGTTA
Downstream 100 bases:
>100_bases ATTCGTTTATCAAAATAATTACTTGATCTGAAGAATGTTCATTCTGAAATAAACCTAAGGACCATTTATCACTTTGATCT TTTGAAAAGAATATTAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 765; Mature: 765
Protein sequence:
>765_residues MFHFNNLNTMMKKINKYGSIALLTITAAIFTGCSDQFLEDKKLYGSFNGTTIYENYESADNRIAYLYYIMLPSATGGSDL TGSMGDMPSTGTSDQYSKCTEEYGGISGLMNPNSPLDYETVTDYFNLDNNYSPWVRIRECNDMIEGVIGSESLTERQKQL LLGQAFFFRAWRYYLMVMMYGGVPIIDNVQNPIIGDSEGIHLVVPRSSTKECIDFICKDLQTAADYLPARWESENKNFGR ITSGAALALKGRVELLYASPLFNRADDVTRWETAYQTNLAAVKKLEEGNFGLAYENNSGKNAAGWGKIFSDYIGSEGGGG TVSEAVLVTLYNNVSPAEHLQLEKWNGWEHSLRPANAGGGGGMTPTAEMVDLFPMADGKKPNDMNGSYDYNQELFFLNRD PRFYRTFAFPGVEWKFDSDDLKSFGEKGQLPYGINGYTTGNNYKLWNYCWYDNVDDRNSNSKSGYAADCLGTKNTGIYLR KRTDDLALNSNPLYIFEKTSGNGFRQSAAPYMEIRFAEVLLNYAEAACGANHFDEAVNALKRIRKRVGYTDNCGLDPAIF NDRAKLFEAILYERQIELAYEGKRFHDVRRWMLFDGGVGQEALKSTWKLTGFNGNTCNYLGVEPLNGQRRHRIEVYAKNF IAAKSNNVYNEDKTIKETYDELWNKRPTALSLTEDITCTESADDEITYADAKVKALAQFYQEHFKRKNLSTDGNDETILP TFKPYYYILGFKKNAMQNNVSLEQNIGWGDYWRGGADGTFDPLAE
Sequences:
>Translated_765_residues MFHFNNLNTMMKKINKYGSIALLTITAAIFTGCSDQFLEDKKLYGSFNGTTIYENYESADNRIAYLYYIMLPSATGGSDL TGSMGDMPSTGTSDQYSKCTEEYGGISGLMNPNSPLDYETVTDYFNLDNNYSPWVRIRECNDMIEGVIGSESLTERQKQL LLGQAFFFRAWRYYLMVMMYGGVPIIDNVQNPIIGDSEGIHLVVPRSSTKECIDFICKDLQTAADYLPARWESENKNFGR ITSGAALALKGRVELLYASPLFNRADDVTRWETAYQTNLAAVKKLEEGNFGLAYENNSGKNAAGWGKIFSDYIGSEGGGG TVSEAVLVTLYNNVSPAEHLQLEKWNGWEHSLRPANAGGGGGMTPTAEMVDLFPMADGKKPNDMNGSYDYNQELFFLNRD PRFYRTFAFPGVEWKFDSDDLKSFGEKGQLPYGINGYTTGNNYKLWNYCWYDNVDDRNSNSKSGYAADCLGTKNTGIYLR KRTDDLALNSNPLYIFEKTSGNGFRQSAAPYMEIRFAEVLLNYAEAACGANHFDEAVNALKRIRKRVGYTDNCGLDPAIF NDRAKLFEAILYERQIELAYEGKRFHDVRRWMLFDGGVGQEALKSTWKLTGFNGNTCNYLGVEPLNGQRRHRIEVYAKNF IAAKSNNVYNEDKTIKETYDELWNKRPTALSLTEDITCTESADDEITYADAKVKALAQFYQEHFKRKNLSTDGNDETILP TFKPYYYILGFKKNAMQNNVSLEQNIGWGDYWRGGADGTFDPLAE >Mature_765_residues MFHFNNLNTMMKKINKYGSIALLTITAAIFTGCSDQFLEDKKLYGSFNGTTIYENYESADNRIAYLYYIMLPSATGGSDL TGSMGDMPSTGTSDQYSKCTEEYGGISGLMNPNSPLDYETVTDYFNLDNNYSPWVRIRECNDMIEGVIGSESLTERQKQL LLGQAFFFRAWRYYLMVMMYGGVPIIDNVQNPIIGDSEGIHLVVPRSSTKECIDFICKDLQTAADYLPARWESENKNFGR ITSGAALALKGRVELLYASPLFNRADDVTRWETAYQTNLAAVKKLEEGNFGLAYENNSGKNAAGWGKIFSDYIGSEGGGG TVSEAVLVTLYNNVSPAEHLQLEKWNGWEHSLRPANAGGGGGMTPTAEMVDLFPMADGKKPNDMNGSYDYNQELFFLNRD PRFYRTFAFPGVEWKFDSDDLKSFGEKGQLPYGINGYTTGNNYKLWNYCWYDNVDDRNSNSKSGYAADCLGTKNTGIYLR KRTDDLALNSNPLYIFEKTSGNGFRQSAAPYMEIRFAEVLLNYAEAACGANHFDEAVNALKRIRKRVGYTDNCGLDPAIF NDRAKLFEAILYERQIELAYEGKRFHDVRRWMLFDGGVGQEALKSTWKLTGFNGNTCNYLGVEPLNGQRRHRIEVYAKNF IAAKSNNVYNEDKTIKETYDELWNKRPTALSLTEDITCTESADDEITYADAKVKALAQFYQEHFKRKNLSTDGNDETILP TFKPYYYILGFKKNAMQNNVSLEQNIGWGDYWRGGADGTFDPLAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86327; Mature: 86327
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHFNNLNTMMKKINKYGSIALLTITAAIFTGCSDQFLEDKKLYGSFNGTTIYENYESAD CCEECHHHHHHHHHHHCCCEEHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCCCCC NRIAYLYYIMLPSATGGSDLTGSMGDMPSTGTSDQYSKCTEEYGGISGLMNPNSPLDYET CEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEECCCCCCCCCCHHH VTDYFNLDNNYSPWVRIRECNDMIEGVIGSESLTERQKQLLLGQAFFFRAWRYYLMVMMY HHHHHCCCCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGVPIIDNVQNPIIGDSEGIHLVVPRSSTKECIDFICKDLQTAADYLPARWESENKNFGR CCCCEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE ITSGAALALKGRVELLYASPLFNRADDVTRWETAYQTNLAAVKKLEEGNFGLAYENNSGK ECCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC NAAGWGKIFSDYIGSEGGGGTVSEAVLVTLYNNVSPAEHLQLEKWNGWEHSLRPANAGGG CCCHHHHHHHHHHCCCCCCCCHHHEEEEEEECCCCHHHHEEEECCCCCCCCCCCCCCCCC GGMTPTAEMVDLFPMADGKKPNDMNGSYDYNQELFFLNRDPRFYRTFAFPGVEWKFDSDD CCCCCHHHHHHHEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCEEEEECCHH LKSFGEKGQLPYGINGYTTGNNYKLWNYCWYDNVDDRNSNSKSGYAADCLGTKNTGIYLR HHHHHHCCCCCCCCCCEECCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEE KRTDDLALNSNPLYIFEKTSGNGFRQSAAPYMEIRFAEVLLNYAEAACGANHFDEAVNAL ECCCCEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH KRIRKRVGYTDNCGLDPAIFNDRAKLFEAILYERQIELAYEGKRFHDVRRWMLFDGGVGQ HHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHEECCCCCH EALKSTWKLTGFNGNTCNYLGVEPLNGQRRHRIEVYAKNFIAAKSNNVYNEDKTIKETYD HHHHCCEEEECCCCCCCCEECCCCCCCCCHHEEEEEEHHEEEECCCCCCCCCHHHHHHHH ELWNKRPTALSLTEDITCTESADDEITYADAKVKALAQFYQEHFKRKNLSTDGNDETILP HHHCCCCCEEEEECCCEECCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEC TFKPYYYILGFKKNAMQNNVSLEQNIGWGDYWRGGADGTFDPLAE CCCCEEEEEEEEHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFHFNNLNTMMKKINKYGSIALLTITAAIFTGCSDQFLEDKKLYGSFNGTTIYENYESAD CCEECHHHHHHHHHHHCCCEEHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCCCCC NRIAYLYYIMLPSATGGSDLTGSMGDMPSTGTSDQYSKCTEEYGGISGLMNPNSPLDYET CEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEECCCCCCCCCCHHH VTDYFNLDNNYSPWVRIRECNDMIEGVIGSESLTERQKQLLLGQAFFFRAWRYYLMVMMY HHHHHCCCCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGVPIIDNVQNPIIGDSEGIHLVVPRSSTKECIDFICKDLQTAADYLPARWESENKNFGR CCCCEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE ITSGAALALKGRVELLYASPLFNRADDVTRWETAYQTNLAAVKKLEEGNFGLAYENNSGK ECCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC NAAGWGKIFSDYIGSEGGGGTVSEAVLVTLYNNVSPAEHLQLEKWNGWEHSLRPANAGGG CCCHHHHHHHHHHCCCCCCCCHHHEEEEEEECCCCHHHHEEEECCCCCCCCCCCCCCCCC GGMTPTAEMVDLFPMADGKKPNDMNGSYDYNQELFFLNRDPRFYRTFAFPGVEWKFDSDD CCCCCHHHHHHHEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCEEEEECCHH LKSFGEKGQLPYGINGYTTGNNYKLWNYCWYDNVDDRNSNSKSGYAADCLGTKNTGIYLR HHHHHHCCCCCCCCCCEECCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEE KRTDDLALNSNPLYIFEKTSGNGFRQSAAPYMEIRFAEVLLNYAEAACGANHFDEAVNAL ECCCCEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH KRIRKRVGYTDNCGLDPAIFNDRAKLFEAILYERQIELAYEGKRFHDVRRWMLFDGGVGQ HHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHEECCCCCH EALKSTWKLTGFNGNTCNYLGVEPLNGQRRHRIEVYAKNFIAAKSNNVYNEDKTIKETYD HHHHCCEEEECCCCCCCCEECCCCCCCCCHHEEEEEEHHEEEECCCCCCCCCHHHHHHHH ELWNKRPTALSLTEDITCTESADDEITYADAKVKALAQFYQEHFKRKNLSTDGNDETILP HHHCCCCCEEEEECCCEECCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEC TFKPYYYILGFKKNAMQNNVSLEQNIGWGDYWRGGADGTFDPLAE CCCCEEEEEEEEHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA