| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29144788
Identifier: 29144788
GI number: 29144788
Start: 4704406
End: 4705014
Strand: Direct
Name: 29144788
Synonym: t4552
Alternate gene names: NA
Gene position: 4704406-4705014 (Clockwise)
Preceding gene: 29144784
Following gene: 29144789
Centisome position: 98.17
GC content: 47.78
Gene sequence:
>609_bases ATGAAAGTCATATGGACTGTCACTCCTGTGGGGTATCAGCGCATAGCGAAACGTTGCCCTTCATGCAGCGTAAAACGGGA CTTCACGCCTTCTGGGGCATTTCGGGTTAATTCGCAAAAGAAGGTACTCGATGTCTGGAGTATCTATAAATGCACACACT GCGATTACACCTGGAATATCTCCCTGTTCTCGCGCCTGCCAGTCAGCAAAATTAACCGCAATCTTTATTGCCGGCTGATG GCGAATGATGCTGCCACGGTGCAATATTTTGCTTATGACAACGCGATCCTGAAGCGAAACAATGCTGAATTATCGGGGCA GCCTGATTTTCACATTCAGGAACGGTGGCTGGTCAGTATCGCCTCCCACAAGCAGGTCAGTGTTAGCGTCAGGATTTCCC GTTCTTTTCAGGTCAGCCTGCTGTCGATTTTGAAGAAGCAACTCCTGCTAAGCGCAGCCGAAATCAAGAGACGGATTGAA ACAGGGCAAATAAGTGGCGTCACGATGAAAATGCTTAAATCGCGAAAACTGAAGAATGCGAAATATGATTTGCAGCTCTC TGTTGAAACACTGTATGACCGGCGAAGGATTGTTCTGACCCGTCGATAA
Upstream 100 bases:
>100_bases TTAACCCGCTGAAAAATATCACTTAAATATTTTTCATACACAAACATTTATGGTCCGCTGAGTTCGGATCCGGTTTTGTA TGGGTTAAAAAAGGTACGTT
Downstream 100 bases:
>100_bases AAACAATAAGCTCACCTTACGTTTAAGTGTGCTGGTATGGCAACGACGCAACAGAATGAAAGAAGGACTAAGGGACAGGT GAGCTTTAGTTGAATAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MKVIWTVTPVGYQRIAKRCPSCSVKRDFTPSGAFRVNSQKKVLDVWSIYKCTHCDYTWNISLFSRLPVSKINRNLYCRLM ANDAATVQYFAYDNAILKRNNAELSGQPDFHIQERWLVSIASHKQVSVSVRISRSFQVSLLSILKKQLLLSAAEIKRRIE TGQISGVTMKMLKSRKLKNAKYDLQLSVETLYDRRRIVLTRR
Sequences:
>Translated_202_residues MKVIWTVTPVGYQRIAKRCPSCSVKRDFTPSGAFRVNSQKKVLDVWSIYKCTHCDYTWNISLFSRLPVSKINRNLYCRLM ANDAATVQYFAYDNAILKRNNAELSGQPDFHIQERWLVSIASHKQVSVSVRISRSFQVSLLSILKKQLLLSAAEIKRRIE TGQISGVTMKMLKSRKLKNAKYDLQLSVETLYDRRRIVLTRR >Mature_202_residues MKVIWTVTPVGYQRIAKRCPSCSVKRDFTPSGAFRVNSQKKVLDVWSIYKCTHCDYTWNISLFSRLPVSKINRNLYCRLM ANDAATVQYFAYDNAILKRNNAELSGQPDFHIQERWLVSIASHKQVSVSVRISRSFQVSLLSILKKQLLLSAAEIKRRIE TGQISGVTMKMLKSRKLKNAKYDLQLSVETLYDRRRIVLTRR
Specific function: Unknown
COG id: COG4332
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23421; Mature: 23421
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVIWTVTPVGYQRIAKRCPSCSVKRDFTPSGAFRVNSQKKVLDVWSIYKCTHCDYTWNI CEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHEEEECCCEEEEE SLFSRLPVSKINRNLYCRLMANDAATVQYFAYDNAILKRNNAELSGQPDFHIQERWLVSI HHHHCCCHHHCCCCEEEEEEECCCCEEEEEEECCEEEECCCCCCCCCCCCEECHHEEEEE ASHKQVSVSVRISRSFQVSLLSILKKQLLLSAAEIKRRIETGQISGVTMKMLKSRKLKNA CCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC KYDLQLSVETLYDRRRIVLTRR CEEEEEEHHHHHCCEEEEEECC >Mature Secondary Structure MKVIWTVTPVGYQRIAKRCPSCSVKRDFTPSGAFRVNSQKKVLDVWSIYKCTHCDYTWNI CEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHEEEECCCEEEEE SLFSRLPVSKINRNLYCRLMANDAATVQYFAYDNAILKRNNAELSGQPDFHIQERWLVSI HHHHCCCHHHCCCCEEEEEEECCCCEEEEEEECCEEEECCCCCCCCCCCCEECHHEEEEE ASHKQVSVSVRISRSFQVSLLSILKKQLLLSAAEIKRRIETGQISGVTMKMLKSRKLKNA CCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC KYDLQLSVETLYDRRRIVLTRR CEEEEEEHHHHHCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA