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The map label for this gene is ytfM [H]

Identifier: 29144708

GI number: 29144708

Start: 4608048

End: 4609781

Strand: Direct

Name: ytfM [H]

Synonym: t4463

Alternate gene names: 29144708

Gene position: 4608048-4609781 (Clockwise)

Preceding gene: 29144704

Following gene: 29144709

Centisome position: 96.16

GC content: 53.29

Gene sequence:

>1734_bases
GTGCCACATATCCGTCAGTTATGTTGGGTTAGCTTACTGTGCCTGAGCAGTTCTGCGGTAGCCGCAAATGTTCGTCTGAA
AGTCGAAGGGCTATCCGGAGAGCTGGAAAAAAACGTTCGCGCACAGCTCTCTACGATTCAGAGCGATGAGGTGACGCCGG
ATCGGCGCTTTCGCGCCCGAGTTGATGATGCGATTCGCGAAGGGCTTAAAGCGTTAGGCTATTACGAACCCACTATCAAA
TTCGACTTGCTTCCACCGCCTGCGAAAGGACGGCAGGTATTAATCGCCAGGGTTACGCCCGGCCAGCCGGTGTTGATTGG
CGGTACAGAAGTCATTTTACGCGGCGGCGCGCGTACGGACAAAGATTATCTGGCCTTACTGAAAACGCGTCCGGCAATCG
GCACGGTGCTCAACCAGGGGGACTATGACAATTTTAAAAAGTCGTTAACCAGCGTGTCGCTACGCAAAGGCTATTTCGAC
AGCGAATTCATTAAAAGTCAGTTGGGAATTGCTCTGGGCCGTCATCAGGCGTTTTGGGATATTGATTATGATAGCGGTGA
GCGCTATCGCTTCGGGCCTGTCACCTTCGAAGGTTCGCAGATTCGTGATGAATATTTACAAAATCTGTTGCCGTTTAAAG
AGGGTGATGAGTACGAATCGAAAGATTTGGCGGAACTAAACCGCCGGCTTTCCGCTACCGGATGGTTTAATTCTGTTGTG
GTGGCGCCGGAATTTGAGAAATCGCGTAAAACAAAAATTCTGCCGTTAAAAGGCGTGGTATCACCGCGAACCGAAAACAC
GATTGAAACCGGGGTGGGGTACTCCACCGACGTCGGGCCGCGCGTGAAAGCGTCGTGGAAAAAACCGTGGATGAACTCCT
ACGGTCATAGCCTGACCACCAGCACCAGTATTTCTGCGCCGGAACAGGTGCTGGATTTTAGTTATAAAATGCCGCTGCTG
AAAAACCCGCTGGAGCAATACTATCTGGTACAGGGCGGTTTTAAACGTACCGATTTGAATGATACGGAGCAGGACTCGAC
CACGCTTGCCGTGTCGCGTTACTGGGACCTTTCCAGCGGTTGGCAGCGGGCGATTAACCTGCGCTGGAGTTTCGACCACT
TTACCCAGGGGAACGTCACCAATACCACCATGCTGTTCTACCCGGGCGTGATGATCAGCCGAACCCGCTCGCGAGGGGGA
CTGATGCCAACCTGGGGCGATTCGCAGCGCTACTCGGTAGACTATTCGAATACGGCCTGGGGCTCCGACGTGGATTTCTC
CGTACTGCAGGCGCAAAACGTCTGGATTCGGACTTTGTACGATCGCCACCGTTTTGTGATGCGCGCCAATTTGGGCTGGA
TAGAAACCGGTGATTTCGACAAAGTTCCGCCGGATTTACGTTTCTTCGCCGGGGGCGACCGCAGTATTCGCGGCTATAAA
TACAAATCTATTTCGCCTAAAGATAGCGACGGCAATCTTAAAGGCGCCTCAAAACTGGCAACCGGATCGCTGGAGTACCA
GTATAACGTCACCGGCAAATGGTGGGGGGCGGTGTTTGTCGATAGCGGCGAGGCGGTTAGTGATATTCGCCGTAGCGATT
TCAAAACCGGGACCGGGGTCGGCGTGCGCTGGGCGTCGCCGGTTGGGCCTGTCAAACTCGATTTTGCCGTACCGGTCGGC
GACAAAGACGAACACGGTTTACAGTTTTATATCGGTCTGGGGCCTGAATTATGA

Upstream 100 bases:

>100_bases
TCGTCTGCTTTTCAATCGAAATTGTTGATTTTATGTTAAGCCGCGGAGCGGTAGTGTGATTTTTTCCAGGGGTGGGAATA
GGGGATATTCAGGAGAAAAT

Downstream 100 bases:

>100_bases
GTTTATGGAAGAAAATAAGCCTCGGCGTGTTGATTTTCATTGTGGTGTTACTGGCGAGCGTTGCGTTTCTGGTCGGGACG
ACGACGGGGCTGCATCTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 577; Mature: 576

Protein sequence:

>577_residues
MPHIRQLCWVSLLCLSSSAVAANVRLKVEGLSGELEKNVRAQLSTIQSDEVTPDRRFRARVDDAIREGLKALGYYEPTIK
FDLLPPPAKGRQVLIARVTPGQPVLIGGTEVILRGGARTDKDYLALLKTRPAIGTVLNQGDYDNFKKSLTSVSLRKGYFD
SEFIKSQLGIALGRHQAFWDIDYDSGERYRFGPVTFEGSQIRDEYLQNLLPFKEGDEYESKDLAELNRRLSATGWFNSVV
VAPEFEKSRKTKILPLKGVVSPRTENTIETGVGYSTDVGPRVKASWKKPWMNSYGHSLTTSTSISAPEQVLDFSYKMPLL
KNPLEQYYLVQGGFKRTDLNDTEQDSTTLAVSRYWDLSSGWQRAINLRWSFDHFTQGNVTNTTMLFYPGVMISRTRSRGG
LMPTWGDSQRYSVDYSNTAWGSDVDFSVLQAQNVWIRTLYDRHRFVMRANLGWIETGDFDKVPPDLRFFAGGDRSIRGYK
YKSISPKDSDGNLKGASKLATGSLEYQYNVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGVGVRWASPVGPVKLDFAVPVG
DKDEHGLQFYIGLGPEL

Sequences:

>Translated_577_residues
MPHIRQLCWVSLLCLSSSAVAANVRLKVEGLSGELEKNVRAQLSTIQSDEVTPDRRFRARVDDAIREGLKALGYYEPTIK
FDLLPPPAKGRQVLIARVTPGQPVLIGGTEVILRGGARTDKDYLALLKTRPAIGTVLNQGDYDNFKKSLTSVSLRKGYFD
SEFIKSQLGIALGRHQAFWDIDYDSGERYRFGPVTFEGSQIRDEYLQNLLPFKEGDEYESKDLAELNRRLSATGWFNSVV
VAPEFEKSRKTKILPLKGVVSPRTENTIETGVGYSTDVGPRVKASWKKPWMNSYGHSLTTSTSISAPEQVLDFSYKMPLL
KNPLEQYYLVQGGFKRTDLNDTEQDSTTLAVSRYWDLSSGWQRAINLRWSFDHFTQGNVTNTTMLFYPGVMISRTRSRGG
LMPTWGDSQRYSVDYSNTAWGSDVDFSVLQAQNVWIRTLYDRHRFVMRANLGWIETGDFDKVPPDLRFFAGGDRSIRGYK
YKSISPKDSDGNLKGASKLATGSLEYQYNVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGVGVRWASPVGPVKLDFAVPVG
DKDEHGLQFYIGLGPEL
>Mature_576_residues
PHIRQLCWVSLLCLSSSAVAANVRLKVEGLSGELEKNVRAQLSTIQSDEVTPDRRFRARVDDAIREGLKALGYYEPTIKF
DLLPPPAKGRQVLIARVTPGQPVLIGGTEVILRGGARTDKDYLALLKTRPAIGTVLNQGDYDNFKKSLTSVSLRKGYFDS
EFIKSQLGIALGRHQAFWDIDYDSGERYRFGPVTFEGSQIRDEYLQNLLPFKEGDEYESKDLAELNRRLSATGWFNSVVV
APEFEKSRKTKILPLKGVVSPRTENTIETGVGYSTDVGPRVKASWKKPWMNSYGHSLTTSTSISAPEQVLDFSYKMPLLK
NPLEQYYLVQGGFKRTDLNDTEQDSTTLAVSRYWDLSSGWQRAINLRWSFDHFTQGNVTNTTMLFYPGVMISRTRSRGGL
MPTWGDSQRYSVDYSNTAWGSDVDFSVLQAQNVWIRTLYDRHRFVMRANLGWIETGDFDKVPPDLRFFAGGDRSIRGYKY
KSISPKDSDGNLKGASKLATGSLEYQYNVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGVGVRWASPVGPVKLDFAVPVGD
KDEHGLQFYIGLGPEL

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0698 [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=577, Percent_Identity=90.4679376083189, Blast_Score=1086, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 64766; Mature: 64635

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHIRQLCWVSLLCLSSSAVAANVRLKVEGLSGELEKNVRAQLSTIQSDEVTPDRRFRAR
CCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH
VDDAIREGLKALGYYEPTIKFDLLPPPAKGRQVLIARVTPGQPVLIGGTEVILRGGARTD
HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEEECCCCEEEECCCEEEEECCCCCC
KDYLALLKTRPAIGTVLNQGDYDNFKKSLTSVSLRKGYFDSEFIKSQLGIALGRHQAFWD
HHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEE
IDYDSGERYRFGPVTFEGSQIRDEYLQNLLPFKEGDEYESKDLAELNRRLSATGWFNSVV
EECCCCCEEEECCEEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEE
VAPEFEKSRKTKILPLKGVVSPRTENTIETGVGYSTDVGPRVKASWKKPWMNSYGHSLTT
ECCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCEEC
STSISAPEQVLDFSYKMPLLKNPLEQYYLVQGGFKRTDLNDTEQDSTTLAVSRYWDLSSG
CCCCCCCHHHHHHHCCCCHHHCHHHHHEEECCCCEECCCCCCCCCCEEEEEEEECCCCCC
WQRAINLRWSFDHFTQGNVTNTTMLFYPGVMISRTRSRGGLMPTWGDSQRYSVDYSNTAW
CHHEEEEEECCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCEEEEECCCCCC
GSDVDFSVLQAQNVWIRTLYDRHRFVMRANLGWIETGDFDKVPPDLRFFAGGDRSIRGYK
CCCCCEEEEECCCHHEEEHHHHCEEEEEECCCEEECCCCCCCCCCCEEEECCCCCCCCEE
YKSISPKDSDGNLKGASKLATGSLEYQYNVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGV
ECCCCCCCCCCCCCCCHHEECCCEEEEEECCEEEEEEEEEECCCHHHHHHHHCCCCCCCC
GVRWASPVGPVKLDFAVPVGDKDEHGLQFYIGLGPEL
CEEECCCCCCEEEEEEECCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure 
PHIRQLCWVSLLCLSSSAVAANVRLKVEGLSGELEKNVRAQLSTIQSDEVTPDRRFRAR
CHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH
VDDAIREGLKALGYYEPTIKFDLLPPPAKGRQVLIARVTPGQPVLIGGTEVILRGGARTD
HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEEECCCCEEEECCCEEEEECCCCCC
KDYLALLKTRPAIGTVLNQGDYDNFKKSLTSVSLRKGYFDSEFIKSQLGIALGRHQAFWD
HHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEE
IDYDSGERYRFGPVTFEGSQIRDEYLQNLLPFKEGDEYESKDLAELNRRLSATGWFNSVV
EECCCCCEEEECCEEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEE
VAPEFEKSRKTKILPLKGVVSPRTENTIETGVGYSTDVGPRVKASWKKPWMNSYGHSLTT
ECCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCEEC
STSISAPEQVLDFSYKMPLLKNPLEQYYLVQGGFKRTDLNDTEQDSTTLAVSRYWDLSSG
CCCCCCCHHHHHHHCCCCHHHCHHHHHEEECCCCEECCCCCCCCCCEEEEEEEECCCCCC
WQRAINLRWSFDHFTQGNVTNTTMLFYPGVMISRTRSRGGLMPTWGDSQRYSVDYSNTAW
CHHEEEEEECCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCEEEEECCCCCC
GSDVDFSVLQAQNVWIRTLYDRHRFVMRANLGWIETGDFDKVPPDLRFFAGGDRSIRGYK
CCCCCEEEEECCCHHEEEHHHHCEEEEEECCCEEECCCCCCCCCCCEEEECCCCCCCCEE
YKSISPKDSDGNLKGASKLATGSLEYQYNVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGV
ECCCCCCCCCCCCCCCHHEECCCEEEEEECCEEEEEEEEEECCCHHHHHHHHCCCCCCCC
GVRWASPVGPVKLDFAVPVGDKDEHGLQFYIGLGPEL
CEEECCCCCCEEEEEEECCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]