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The map label for this gene is ytfF [H]

Identifier: 29144698

GI number: 29144698

Start: 4598409

End: 4599374

Strand: Reverse

Name: ytfF [H]

Synonym: t4453

Alternate gene names: 29144698

Gene position: 4599374-4598409 (Counterclockwise)

Preceding gene: 29144699

Following gene: 29144697

Centisome position: 95.98

GC content: 57.87

Gene sequence:

>966_bases
ATGATTAGCGGCGTGCTATACGCCCTGCTGGCAGGGCTAATGTGGGGATTGATTTTCGTCGGCCCGTTAATCGTGCCGGA
TTACCCGGCCCTCTTACAGTCAATGGGACGCTATCTGGCGCTGGGGCTGATTGCCCTGCCGATTGCCTGGTTAGGCCGCA
CGCGGTTACGCCAGTTGACGCGCAAAGACTGGTCCACCGCCCTGTCGCTGACCCTGATGGGCAATGTAATCTATTACGCC
TGCCTCGCCAGCGCCATTCAGCGAACCGGCGCGCCGGTTTCGACGATGATCATCGGGACATTGCCGGTCGTCATTCCGCT
TTTCGCTAACGTTCTCTATAGCCAACGAGACGGCAGATTATCCTGGCTACGTTTAGCGCCCGCGCTGGCGCTTATCGGTT
TTGGCCTGCTGTGCGTCAATATTGCTGAACTTAGCCAGGGATTGTCCGATGTTAGCGGCTGGCGCTATGGTTCAGGCATT
GTGCTGGCGCTGATTTCCGTAGCGTGCTGGGCATGGTATGCGCTGCGCAACGCCCGCTGGCTGCGGGAAAATCCCGACAA
ACATCCCATGATGTGGGCAACGGCGCAGGCGCTGGTTACGCTGCCGGTCTCGTTAATCGGCTATGCGGCAACCTGTCTGT
GGCTGAGTATCCAGAACCCGATGTTTACCCTGCCCTTTGGCCCGCATCCCGCGCTGTTTATCGGTCTGATGATCGCCATC
GCGGTGCTGTGTTCCTGGGTGGGCGCGTTGTGCTGGAATATCGCCAGCCAAAAATTGCCAACCGTGATTTTAGGGCCGCT
GATTGTTTTTGAAACGTTGGCAGGACTGCTCTATACCTTCATTCTGCGCCAGGAAATCCCGCCATTCCTGACGTTAAGCG
GCATTGCGCTCCTGGTGGCGGGCGTGGTTATTGCCGTGAGAGCGAAACCGGAAAAAGCGACCGTCGTTCCGGTCACGGAA
CGCTAA

Upstream 100 bases:

>100_bases
GCCTTCGCTCCGTACTGTAAGTGTTAAAATTTAGTTAATTTATATGGCATCCTCATAGACCTTCTCTGATAATGACGGAA
CGGTTTATGAGGAGAATCTG

Downstream 100 bases:

>100_bases
TCTCATCCTGGCTTAAATTATACGCACCCCGAAAGAGTTATAGCCTCGCCTTAAAGATGCATTTAAAATACAACTTATAT
TATTGCAAATGAGGTAACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MISGVLYALLAGLMWGLIFVGPLIVPDYPALLQSMGRYLALGLIALPIAWLGRTRLRQLTRKDWSTALSLTLMGNVIYYA
CLASAIQRTGAPVSTMIIGTLPVVIPLFANVLYSQRDGRLSWLRLAPALALIGFGLLCVNIAELSQGLSDVSGWRYGSGI
VLALISVACWAWYALRNARWLRENPDKHPMMWATAQALVTLPVSLIGYAATCLWLSIQNPMFTLPFGPHPALFIGLMIAI
AVLCSWVGALCWNIASQKLPTVILGPLIVFETLAGLLYTFILRQEIPPFLTLSGIALLVAGVVIAVRAKPEKATVVPVTE
R

Sequences:

>Translated_321_residues
MISGVLYALLAGLMWGLIFVGPLIVPDYPALLQSMGRYLALGLIALPIAWLGRTRLRQLTRKDWSTALSLTLMGNVIYYA
CLASAIQRTGAPVSTMIIGTLPVVIPLFANVLYSQRDGRLSWLRLAPALALIGFGLLCVNIAELSQGLSDVSGWRYGSGI
VLALISVACWAWYALRNARWLRENPDKHPMMWATAQALVTLPVSLIGYAATCLWLSIQNPMFTLPFGPHPALFIGLMIAI
AVLCSWVGALCWNIASQKLPTVILGPLIVFETLAGLLYTFILRQEIPPFLTLSGIALLVAGVVIAVRAKPEKATVVPVTE
R
>Mature_321_residues
MISGVLYALLAGLMWGLIFVGPLIVPDYPALLQSMGRYLALGLIALPIAWLGRTRLRQLTRKDWSTALSLTLMGNVIYYA
CLASAIQRTGAPVSTMIIGTLPVVIPLFANVLYSQRDGRLSWLRLAPALALIGFGLLCVNIAELSQGLSDVSGWRYGSGI
VLALISVACWAWYALRNARWLRENPDKHPMMWATAQALVTLPVSLIGYAATCLWLSIQNPMFTLPFGPHPALFIGLMIAI
AVLCSWVGALCWNIASQKLPTVILGPLIVFETLAGLLYTFILRQEIPPFLTLSGIALLVAGVVIAVRAKPEKATVVPVTE
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

Organism=Escherichia coli, GI226510990, Length=320, Percent_Identity=81.875, Blast_Score=520, Evalue=1e-149,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34864; Mature: 34864

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISGVLYALLAGLMWGLIFVGPLIVPDYPALLQSMGRYLALGLIALPIAWLGRTRLRQLT
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKDWSTALSLTLMGNVIYYACLASAIQRTGAPVSTMIIGTLPVVIPLFANVLYSQRDGRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SWLRLAPALALIGFGLLCVNIAELSQGLSDVSGWRYGSGIVLALISVACWAWYALRNARW
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHH
LRENPDKHPMMWATAQALVTLPVSLIGYAATCLWLSIQNPMFTLPFGPHPALFIGLMIAI
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCCCCHHHHHHHHHHH
AVLCSWVGALCWNIASQKLPTVILGPLIVFETLAGLLYTFILRQEIPPFLTLSGIALLVA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
GVVIAVRAKPEKATVVPVTER
HHHHHHCCCCCCCEEECCCCC
>Mature Secondary Structure
MISGVLYALLAGLMWGLIFVGPLIVPDYPALLQSMGRYLALGLIALPIAWLGRTRLRQLT
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKDWSTALSLTLMGNVIYYACLASAIQRTGAPVSTMIIGTLPVVIPLFANVLYSQRDGRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SWLRLAPALALIGFGLLCVNIAELSQGLSDVSGWRYGSGIVLALISVACWAWYALRNARW
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHH
LRENPDKHPMMWATAQALVTLPVSLIGYAATCLWLSIQNPMFTLPFGPHPALFIGLMIAI
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCCCCHHHHHHHHHHH
AVLCSWVGALCWNIASQKLPTVILGPLIVFETLAGLLYTFILRQEIPPFLTLSGIALLVA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
GVVIAVRAKPEKATVVPVTER
HHHHHHCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]