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The map label for this gene is ytfE [H]

Identifier: 29144697

GI number: 29144697

Start: 4597644

End: 4598306

Strand: Reverse

Name: ytfE [H]

Synonym: t4452

Alternate gene names: 29144697

Gene position: 4598306-4597644 (Counterclockwise)

Preceding gene: 29144698

Following gene: 29144692

Centisome position: 95.96

GC content: 55.2

Gene sequence:

>663_bases
ATGGCTTATCGCGATCAACCTTTAGGCGAACTGGCGCTCTCTATTCCCCGCGCATCGGCGCTGTTTCGCCAGTACGATAT
GGATTACTGCTGCGGCGGAAAACAGACGCTGGCGCGCGCCGCCGCTCGTCACGACGTCGATATTGACATTATTGAAGCGC
AACTCGCGCAGTTGGCTGAACAGCCCATCGAAAAAGACTGGCGCGCCGTTCCGCTGGCGGACATTATTGACCATATCGTT
GTGCGCTATCATGACCGACACCGCGAACAACTGCCGGAGCTTATCCTGCAGGCAACCAAAGTGGAACGCGTTCACGCGGA
TAAGCCAAACGTCCCACGCGGCCTGACAAAATATCTCACCGCGCTGCATGAAGAGCTTTCCAGCCATATGATGAAAGAAG
AACAGATCCTGTTCCCCATGATCAAACAGGGTATGGGTCGCCAGGCAACGGGCCCGATAAGCGTAATGGAAAGCGAGCAT
GACGAGGCGGGAGAGCTGGTAGACGTCATCAAACACGTCACCCAAAATGTAACGCCGCCGCCAGAAGCCTGCACCACCTG
GAAAGCGATGTATAACGGCATTAATGAGATGATTGATGCTCTGATGGAGCACATCAGCCTGGAGAATAACGTGCTGTTCC
CACGCGCGCTGGCCGGGGAATAA

Upstream 100 bases:

>100_bases
TCATCCTGGCTTAAATTATACGCACCCCGAAAGAGTTATAGCCTCGCCTTAAAGATGCATTTAAAATACAACTTATATTA
TTGCAAATGAGGTAACGGCT

Downstream 100 bases:

>100_bases
TCCATCGCCAATAAACGATCCTGAACGCATAGACAGGATCGTTTATTCTGAATCGACTAACGCTTTTTAGCGAGAGGTGA
ATGCATTATTAATAACCTCA

Product: iron-sulfur cluster repair di-iron protein

Products: NA

Alternate protein names: RCMNS [H]

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MAYRDQPLGELALSIPRASALFRQYDMDYCCGGKQTLARAAARHDVDIDIIEAQLAQLAEQPIEKDWRAVPLADIIDHIV
VRYHDRHREQLPELILQATKVERVHADKPNVPRGLTKYLTALHEELSSHMMKEEQILFPMIKQGMGRQATGPISVMESEH
DEAGELVDVIKHVTQNVTPPPEACTTWKAMYNGINEMIDALMEHISLENNVLFPRALAGE

Sequences:

>Translated_220_residues
MAYRDQPLGELALSIPRASALFRQYDMDYCCGGKQTLARAAARHDVDIDIIEAQLAQLAEQPIEKDWRAVPLADIIDHIV
VRYHDRHREQLPELILQATKVERVHADKPNVPRGLTKYLTALHEELSSHMMKEEQILFPMIKQGMGRQATGPISVMESEH
DEAGELVDVIKHVTQNVTPPPEACTTWKAMYNGINEMIDALMEHISLENNVLFPRALAGE
>Mature_219_residues
AYRDQPLGELALSIPRASALFRQYDMDYCCGGKQTLARAAARHDVDIDIIEAQLAQLAEQPIEKDWRAVPLADIIDHIVV
RYHDRHREQLPELILQATKVERVHADKPNVPRGLTKYLTALHEELSSHMMKEEQILFPMIKQGMGRQATGPISVMESEHD
EAGELVDVIKHVTQNVTPPPEACTTWKAMYNGINEMIDALMEHISLENNVLFPRALAGE

Specific function: Involved in anaerobic NO protection [H]

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790654, Length=220, Percent_Identity=88.6363636363636, Blast_Score=418, Evalue=1e-118,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 24867; Mature: 24736

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYRDQPLGELALSIPRASALFRQYDMDYCCGGKQTLARAAARHDVDIDIIEAQLAQLAE
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
QPIEKDWRAVPLADIIDHIVVRYHDRHREQLPELILQATKVERVHADKPNVPRGLTKYLT
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ALHEELSSHMMKEEQILFPMIKQGMGRQATGPISVMESEHDEAGELVDVIKHVTQNVTPP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCC
PEACTTWKAMYNGINEMIDALMEHISLENNVLFPRALAGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC
>Mature Secondary Structure 
AYRDQPLGELALSIPRASALFRQYDMDYCCGGKQTLARAAARHDVDIDIIEAQLAQLAE
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
QPIEKDWRAVPLADIIDHIVVRYHDRHREQLPELILQATKVERVHADKPNVPRGLTKYLT
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ALHEELSSHMMKEEQILFPMIKQGMGRQATGPISVMESEHDEAGELVDVIKHVTQNVTPP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCC
PEACTTWKAMYNGINEMIDALMEHISLENNVLFPRALAGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA