Click here to switch to the map view.

The map label for this gene is yjeK [H]

Identifier: 29144634

GI number: 29144634

Start: 4537937

End: 4538965

Strand: Reverse

Name: yjeK [H]

Synonym: t4385

Alternate gene names: 29144634

Gene position: 4538965-4537937 (Counterclockwise)

Preceding gene: 29144638

Following gene: 29144633

Centisome position: 94.72

GC content: 54.91

Gene sequence:

>1029_bases
ATGGCGCATATTGTAACCCTAAATACCCCATTGCGAGAAGATTGGTTAGCGCAACTTGCCGATGTTGTGACCAATCCCGA
CGAACTGCTGCATCTTTTACAGATTGAAGCTGATGAAAACCTCCGGGCAAGACAGGACGCCAGGCGCTTGTTTGCCCTCC
GCGTGCCGCGCGCTTTTATTGCGCGCATGGAGAAGGGCAACCCTGACGATCCTCTTTTACGTCAAGTGCTGACGTCCCGG
GATGAATTTATTGTCGCCCCCGGTTTCTCCACCGACCCGCTGGAAGAGCAACACAGCGTGGTGCCAGGATTATTGCATAA
ATACCAAAACCGGGCGCTATTGCTGGTAAAAGGCGGATGTGCGGTAAATTGCCGCTACTGTTTCCGTCGTCACTTCCCGT
ATGCGGAGAATCAAGGCAATAAGCGCAACTGGACAGTCGCGCTGGAGTATATCGCCGCACACCCGGAACTGGATGAGATC
ATCTTTTCCGGCGGCGATCCGCTGATGGCGAAAGATCATGAGCTGGACTGGCTGCTCACGCAACTGGAAGCCATTAAGCA
CGTCAAGCGGCTACGCATCCACAGTCGGTTGCCTATCGTTATCCCGGCACGCATTACTGACGAACTGGTCGCCCGCTTTG
ACCAGTCATGTCTGCAAATTTTGTTGGTGAACCATATCAACCACGCCAATGAAGTGGACGAGGCGTTCTGCCTGGCGATG
AAGAAACTGCGCCACGTGGGCGTCACGCTTCTCAACCAGAGCGTCCTGCTGCGTGGCGTGAATGATAACGCGCAAACGCT
GGCGAATCTGAGCAACGCGCTATTTGACGCCGGCGTGATGCCCTATTACCTGCATGTGCTGGATAAAGTGCAGGGCGCCG
CGCATTTTATGGTCACCGATGACGAAGCCCGGCAAATCATGCGCGAACTGCTCACGCTGGTATCCGGCTATATGGTGCCA
AGACTGGCGCGTGAAATCGGCGGCGAACCGAGCAAAACACCGCTGGATTTACAGCTTCGGCAGTGCTAA

Upstream 100 bases:

>100_bases
TTCGCCATCCAACATGATTTTAAGACCGGAACGAAAATCGTTGCTATAGTAAGTCGCCATAAGGCCCTCTGAAATTGTTA
ACTGGTAGCTAAGCCACAAA

Downstream 100 bases:

>100_bases
TCCTCGCGGGCGCGTCAGGGACGACGAAAAATATTACCGCGCAATATCACGAGGAGATTCCCCCGCGATTCTCCTCACCC
TCTGGCGAGGATAAACTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MAHIVTLNTPLREDWLAQLADVVTNPDELLHLLQIEADENLRARQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSR
DEFIVAPGFSTDPLEEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQGNKRNWTVALEYIAAHPELDEI
IFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPIVIPARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAM
KKLRHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMVP
RLAREIGGEPSKTPLDLQLRQC

Sequences:

>Translated_342_residues
MAHIVTLNTPLREDWLAQLADVVTNPDELLHLLQIEADENLRARQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSR
DEFIVAPGFSTDPLEEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQGNKRNWTVALEYIAAHPELDEI
IFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPIVIPARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAM
KKLRHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMVP
RLAREIGGEPSKTPLDLQLRQC
>Mature_341_residues
AHIVTLNTPLREDWLAQLADVVTNPDELLHLLQIEADENLRARQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRD
EFIVAPGFSTDPLEEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQGNKRNWTVALEYIAAHPELDEII
FSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPIVIPARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAMK
KLRHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMVPR
LAREIGGEPSKTPLDLQLRQC

Specific function: With YjeA might be involved in the post-translational modification of elongation factor P (EF-P) [H]

COG id: COG1509

COG function: function code E; Lysine 2,3-aminomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the KamA family [H]

Homologues:

Organism=Escherichia coli, GI1790589, Length=341, Percent_Identity=87.683284457478, Blast_Score=617, Evalue=1e-178,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003739
- InterPro:   IPR022462
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 38841; Mature: 38710

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHIVTLNTPLREDWLAQLADVVTNPDELLHLLQIEADENLRARQDARRLFALRVPRAFI
CCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHH
ARMEKGNPDDPLLRQVLTSRDEFIVAPGFSTDPLEEQHSVVPGLLHKYQNRALLLVKGGC
HHHHCCCCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCC
AVNCRYCFRRHFPYAENQGNKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLT
EEEHHHHHHHCCCCCCCCCCCCCCEEEEEEHHCCCCHHHHHHCCCCCCCCCCCHHHHHHH
QLEAIKHVKRLRIHSRLPIVIPARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAM
HHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KKLRHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTD
HHHHHHHHHHHCCHHHEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEC
DEARQIMRELLTLVSGYMVPRLAREIGGEPSKTPLDLQLRQC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCC
>Mature Secondary Structure 
AHIVTLNTPLREDWLAQLADVVTNPDELLHLLQIEADENLRARQDARRLFALRVPRAFI
CEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHH
ARMEKGNPDDPLLRQVLTSRDEFIVAPGFSTDPLEEQHSVVPGLLHKYQNRALLLVKGGC
HHHHCCCCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCC
AVNCRYCFRRHFPYAENQGNKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLT
EEEHHHHHHHCCCCCCCCCCCCCCEEEEEEHHCCCCHHHHHHCCCCCCCCCCCHHHHHHH
QLEAIKHVKRLRIHSRLPIVIPARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAM
HHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KKLRHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTD
HHHHHHHHHHHCCHHHEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEC
DEARQIMRELLTLVSGYMVPRLAREIGGEPSKTPLDLQLRQC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]