Click here to switch to the map view.

The map label for this gene is 29144606

Identifier: 29144606

GI number: 29144606

Start: 4508342

End: 4509853

Strand: Direct

Name: 29144606

Synonym: t4355

Alternate gene names: NA

Gene position: 4508342-4509853 (Clockwise)

Preceding gene: 29144605

Following gene: 29144607

Centisome position: 94.08

GC content: 50.86

Gene sequence:

>1512_bases
ATGCCCCACACTGATACTCCTGAACAGGCTGCTGTCATCGCATGGAAGGGCGAACGTCTGGTTGTCTGTGCTTTTGCCGG
GAGTGGCAAAACCACCACACTTCGTCGTTATGCTGAGGAAAATCCAACGGAACGAATGCTCTATATTGCTTATAACCGTG
CCATTCGGGATGAGGCGGAGCAGAAATTCCCCTTCAACGTTACCTGCAAAACATCGCATCAACTGGCCTGGCCGACGGTC
GGGAAACATTACAGTCATCGTCTGATTAATTCACTACGACTGACCTATGTCGCCCGGGCGCTAAACTCCCGCAACTGGTT
GCTGGCCAGACTGACGCTTGATGTTCTGAATCGCTTTATATGCAGCGCGGCCACCGATATTACGCCTGAACACATGCCTG
ATCCTGACGACTGTAAGGGGCTACAACCAGGTCAAATCCTGTTTTCAGCAAAGAAAATCTGGGCAATGATGTCGGCCCGT
CAGGGGGATTTTCCGGTCACCCATGATACTTATCTAAAGCTTTACCAGTTGAGCAAACCGAATCTTTCTTCCCGCTATAC
CACGTTATTGTTTGATGAAGCTCAGGATGCCAATCCTGTCATCAGCGCCATTGTGCTCAACCAGACCTGCCGGGTAGTTC
TGGTTGGAGATACTCATCAGCAAATCTACCGCTTTCGTGGGGCGGATAATGCCATGCAGGCTCCGCAACTGGAGAACTCA
GACCGTCTTTGGCTAACCCACAGCTTTCGCTTCGGTCCGGAGGTAGCCGGGGTGGCCAACAGGCTGCTGGCCCTGAAGGG
CGAAACGCATCAGATAACTGGAAAGGGGGGCGCAGGCCGTGTTCTGCTCACAATGCCGCGGAATTTTGGCCATCATGCTG
TTCTTCACCGATCTGTCTGTGGTGTCATCCGGACGGCACTGCACTGGTCGCTGGCTGGCAGGAAAGTATTCTGGGTTGGT
GGTATGGAAAGCTACAGAATTGAGGATTTACTGGATCTGTACTGGTTCTCAATTGATATGTCGGAGCGTATGCGACACGA
CAGGCTGACCCGTGAATACCGGGACTATGATGAATATCTGCAGATAGCCGAAGATACCGGTGATGTGGAGATGAAGCAGG
GGATATTTATTCTTGAACAGTTTTTTCCGTTACCGGACAGACTGAATACGTTACGTGAGCAACGCGTCATCAGTGAATCT
GAAGCTGATGTGACGGTATGTACAGCACACAGGAGTAAGGGGCTCGAATGGGACAGGGTGAAGTTACATGATGACTTTCT
CGATATTCTGGATCCTGACATGCCGGAAAGTCAGCGGCAGGATGAAATTAACCTCATGTATGTGGCAGCCACCCGGGCGC
GTAAAGTGCTTATAACCGATCCGATATTGCACGAGCTTCTGATCCAGCCCCGGGCTGAAGATATAGCCGGAACTTCTGCG
GATAAATCGGGTGAGTCAGAAGTGAGTACAGAAAACGATAAAAAAGGGACTGAATATGTTCCGGAAAGTTAA

Upstream 100 bases:

>100_bases
CTGGTTTGCAGAATTCTTTTTTTTGGATTTATAAATTGCACTGGATAACAGTCTGGCGGGTTCTCAGGATGAGCAAAATG
CTTTTATCCGGAGCCCGATT

Downstream 100 bases:

>100_bases
GTCATGGATGGAGAAGAAAAACTTCAGACAGATAGAAGAAAATAAATCGGGAAATGCGAAGAAGAGACTTATTCCCTGTA
CGGATGGATATTTTAACCCT

Product: DNA helicase

Products: NA

Alternate protein names: Superfamily I DNA/RNA Helicase-Like Protein; Helicase; Superfamily I DNA/RNA Helicase; Helicase Superfamily Protein I; UvrD/REP Helicase; F-Box Only Protein; I DNA And RNA Helicase Protein; I DNA And RNA Helicase; Superfamily I DNA And RNA Helicase; I DNA/RNA Helicase; UvrD/Rep Family Helicase; Helicase Superfamily I

Number of amino acids: Translated: 503; Mature: 502

Protein sequence:

>503_residues
MPHTDTPEQAAVIAWKGERLVVCAFAGSGKTTTLRRYAEENPTERMLYIAYNRAIRDEAEQKFPFNVTCKTSHQLAWPTV
GKHYSHRLINSLRLTYVARALNSRNWLLARLTLDVLNRFICSAATDITPEHMPDPDDCKGLQPGQILFSAKKIWAMMSAR
QGDFPVTHDTYLKLYQLSKPNLSSRYTTLLFDEAQDANPVISAIVLNQTCRVVLVGDTHQQIYRFRGADNAMQAPQLENS
DRLWLTHSFRFGPEVAGVANRLLALKGETHQITGKGGAGRVLLTMPRNFGHHAVLHRSVCGVIRTALHWSLAGRKVFWVG
GMESYRIEDLLDLYWFSIDMSERMRHDRLTREYRDYDEYLQIAEDTGDVEMKQGIFILEQFFPLPDRLNTLREQRVISES
EADVTVCTAHRSKGLEWDRVKLHDDFLDILDPDMPESQRQDEINLMYVAATRARKVLITDPILHELLIQPRAEDIAGTSA
DKSGESEVSTENDKKGTEYVPES

Sequences:

>Translated_503_residues
MPHTDTPEQAAVIAWKGERLVVCAFAGSGKTTTLRRYAEENPTERMLYIAYNRAIRDEAEQKFPFNVTCKTSHQLAWPTV
GKHYSHRLINSLRLTYVARALNSRNWLLARLTLDVLNRFICSAATDITPEHMPDPDDCKGLQPGQILFSAKKIWAMMSAR
QGDFPVTHDTYLKLYQLSKPNLSSRYTTLLFDEAQDANPVISAIVLNQTCRVVLVGDTHQQIYRFRGADNAMQAPQLENS
DRLWLTHSFRFGPEVAGVANRLLALKGETHQITGKGGAGRVLLTMPRNFGHHAVLHRSVCGVIRTALHWSLAGRKVFWVG
GMESYRIEDLLDLYWFSIDMSERMRHDRLTREYRDYDEYLQIAEDTGDVEMKQGIFILEQFFPLPDRLNTLREQRVISES
EADVTVCTAHRSKGLEWDRVKLHDDFLDILDPDMPESQRQDEINLMYVAATRARKVLITDPILHELLIQPRAEDIAGTSA
DKSGESEVSTENDKKGTEYVPES
>Mature_502_residues
PHTDTPEQAAVIAWKGERLVVCAFAGSGKTTTLRRYAEENPTERMLYIAYNRAIRDEAEQKFPFNVTCKTSHQLAWPTVG
KHYSHRLINSLRLTYVARALNSRNWLLARLTLDVLNRFICSAATDITPEHMPDPDDCKGLQPGQILFSAKKIWAMMSARQ
GDFPVTHDTYLKLYQLSKPNLSSRYTTLLFDEAQDANPVISAIVLNQTCRVVLVGDTHQQIYRFRGADNAMQAPQLENSD
RLWLTHSFRFGPEVAGVANRLLALKGETHQITGKGGAGRVLLTMPRNFGHHAVLHRSVCGVIRTALHWSLAGRKVFWVGG
MESYRIEDLLDLYWFSIDMSERMRHDRLTREYRDYDEYLQIAEDTGDVEMKQGIFILEQFFPLPDRLNTLREQRVISESE
ADVTVCTAHRSKGLEWDRVKLHDDFLDILDPDMPESQRQDEINLMYVAATRARKVLITDPILHELLIQPRAEDIAGTSAD
KSGESEVSTENDKKGTEYVPES

Specific function: Unknown

COG id: COG0210

COG function: function code L; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI30795119, Length=516, Percent_Identity=31.9767441860465, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI30795117, Length=516, Percent_Identity=31.9767441860465, Blast_Score=224, Evalue=1e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57380; Mature: 57249

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHTDTPEQAAVIAWKGERLVVCAFAGSGKTTTLRRYAEENPTERMLYIAYNRAIRDEAE
CCCCCCCCCEEEEEECCCEEEEEEECCCCCCHHHHHHHHCCCCCEEEEEEECHHHHHHHH
QKFPFNVTCKTSHQLAWPTVGKHYSHRLINSLRLTYVARALNSRNWLLARLTLDVLNRFI
HCCCEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH
CSAATDITPEHMPDPDDCKGLQPGQILFSAKKIWAMMSARQGDFPVTHDTYLKLYQLSKP
HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEECCCC
NLSSRYTTLLFDEAQDANPVISAIVLNQTCRVVLVGDTHQQIYRFRGADNAMQAPQLENS
CCCCCEEEEEEECCCCCCHHHHHHEECCCEEEEEECCCHHHHHHHCCCCCCCCCCCCCCC
DRLWLTHSFRFGPEVAGVANRLLALKGETHQITGKGGAGRVLLTMPRNFGHHAVLHRSVC
CEEEEEEECCCCCHHHHHHHHHEEECCCCEEEECCCCCCEEEEECCCCCCHHHHHHHHHH
GVIRTALHWSLAGRKVFWVGGMESYRIEDLLDLYWFSIDMSERMRHDRLTREYRDYDEYL
HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHEECCHHHHHHHHHHHHHHHCHHHHH
QIAEDTGDVEMKQGIFILEQFFPLPDRLNTLREQRVISESEADVTVCTAHRSKGLEWDRV
HHHCCCCCEEHHCCCCEEHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEE
KLHDDFLDILDPDMPESQRQDEINLMYVAATRARKVLITDPILHELLIQPRAEDIAGTSA
EECHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEEECHHHHHHHCCCCCHHHCCCCC
DKSGESEVSTENDKKGTEYVPES
CCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PHTDTPEQAAVIAWKGERLVVCAFAGSGKTTTLRRYAEENPTERMLYIAYNRAIRDEAE
CCCCCCCCEEEEEECCCEEEEEEECCCCCCHHHHHHHHCCCCCEEEEEEECHHHHHHHH
QKFPFNVTCKTSHQLAWPTVGKHYSHRLINSLRLTYVARALNSRNWLLARLTLDVLNRFI
HCCCEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH
CSAATDITPEHMPDPDDCKGLQPGQILFSAKKIWAMMSARQGDFPVTHDTYLKLYQLSKP
HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEECCCC
NLSSRYTTLLFDEAQDANPVISAIVLNQTCRVVLVGDTHQQIYRFRGADNAMQAPQLENS
CCCCCEEEEEEECCCCCCHHHHHHEECCCEEEEEECCCHHHHHHHCCCCCCCCCCCCCCC
DRLWLTHSFRFGPEVAGVANRLLALKGETHQITGKGGAGRVLLTMPRNFGHHAVLHRSVC
CEEEEEEECCCCCHHHHHHHHHEEECCCCEEEECCCCCCEEEEECCCCCCHHHHHHHHHH
GVIRTALHWSLAGRKVFWVGGMESYRIEDLLDLYWFSIDMSERMRHDRLTREYRDYDEYL
HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHEECCHHHHHHHHHHHHHHHCHHHHH
QIAEDTGDVEMKQGIFILEQFFPLPDRLNTLREQRVISESEADVTVCTAHRSKGLEWDRV
HHHCCCCCEEHHCCCCEEHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEE
KLHDDFLDILDPDMPESQRQDEINLMYVAATRARKVLITDPILHELLIQPRAEDIAGTSA
EECHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEEECHHHHHHHCCCCCHHHCCCCC
DKSGESEVSTENDKKGTEYVPES
CCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA