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The map label for this gene is tviD

Identifier: 29144601

GI number: 29144601

Start: 4501859

End: 4504354

Strand: Reverse

Name: tviD

Synonym: t4350

Alternate gene names: 29144601

Gene position: 4504354-4501859 (Counterclockwise)

Preceding gene: 29144602

Following gene: 29144600

Centisome position: 94.0

GC content: 43.11

Gene sequence:

>2496_bases
ATGAATTTAATGAAATCGTCAGGGATGTTTACGCTTACAGCCATTGGCAGTTGCCGTATTGTGAGTCCGGTAAAACGAGC
TCAGCCTTATTTTAATTTTCAGGCAAACTTTAAGAGAATATATGGTTTTACGCATACGAGCAGCGAGGCATTACAGCAGA
TTCGGTTTATTTTGGGCTTGATAGACATTCCTGAAAAGGTCCGACCATTTATTTTTAGACCTAATGTAAACTATTCAAAC
ACCGACGTACATAGTCGTTCTGATTTCTATATCATTGAGATTTCAAGTCAGAAGAAGATTATGGCCTATGGGTTCTGCTT
ACAAATAAATTATTTAACTCGTCATTTCTATGAATTTTTTAGCCAAACAGAGCGGGCGTGCATGTACTGGTCGTTGGCCA
CGCAAGGAAATCGACACAAACTGCTGGCCTATCTCAAAGACGATCCCTGTTTTGCCGGAATGTCGGAAGACGATCGTGCC
TTATTAAGCAATATCAATGTCGAGCAGATGGATGAGCATGCTATCGAACAGGATATGATGGAAATCGTTCAGCTTCTTGG
TCGCGATCGCGTTATGTTTATGACACATGTTGATGCCGTGACTCGTGCTGGAACCGTCATTCTATCCCGTAGTCGGTTGA
TTAAAAATGTCGACACCATCGCCGCCAGGATGGATATTCCCTGCGTTAACCCGACAAATTTGATGGAAAAGTGGGGGCAG
AAACGAGCCCTGGAAAAAAATGGCGACGATCTTACTCATTATACCGATATGTTTGGTGACGCGATCGTTGCGGCTATTTT
TAAGGGAGTGATCAATAATACTAATCATCATCTTGATGAGGGGCGACAAGAGAAACAGGACCAAATACGTGAGATTACCT
TATCGATCACTAAGCAGCTTGCAGATGGCGACATTATTGCTGCATCACAACAACTTTTTGCCGCATTAAGAAATCAGCAG
CAAGATCCCGTTCTAATCCAACTTCGGTCCGTAATCTTCAGCCATTTAGGTTATTATGAACAGGCTTATCAGGATATTAG
TGATGTTGAGAAAATTATCGGTACGACTGACAGTACATTACGTTGTCGGCTGAGGTCTCTACATGGATTAGCGCGTTGGC
GGGAAGCCTTATCGACGGCAGAGATGATGCTTTCCAATGAAATTGAAGATGAAGAAGTCCTTACCGTTGCCGCCGGCTCA
GCCGATGCTTTACAGCTGTTTGATAAGTCATATCATTATTGGAAACGTGTACTATTATTGAATCCTGAAACTCAAAGCGG
ATGGGTTAATTTCCTGAGCAGCACGCAATATTTCAATGATGGCAACGCATTCTCTGAAGCTTTCCATGCCGGCATTCAAT
CGCAGCGCCTAAATGATACGTTTATGGAAACGGCGTTATCTTTGGCAATCAAATTCAGTGATGAATTGATTTTCATGCAT
GCGCTCGAGCAGCTACTCCGCCATGAGTCAGAATTTGCGCTGACGGTATTGTCGACGATTCATGATACCGGTCTCGTTAT
CCGCACAGCTTTCTGCATCAAGAATATGAGCTATCATCAAGCGCTTCGCACCTCGTATAAAGATAAAATCCACGACGTTT
TTGAGGCATGGAACAATACCGCGCTGTCGCTACATTCGGTTGATGATTTTGTCTCACTGAGTACTTCGCTAGCCTATAGC
TACTCTGCATTTATGGTTTATCCCCATTCACGTATTTCTCGCTTTAATAATGAAGTTAAAATGGCATGGCGCGATAAATT
AAGAGAAATGTATGAGCGTGAGGATTATGAAAATATCCTGGCAGGGGCGAAAATAGTGTGGCCACTTCTGAAGTTTGATC
CCGTTGGCACCGTATATTGTGCAAGAACGCTGGTGAATCTTGGTGCCTGGAAAGACGCGTGCACGTTGGCCCACATGACC
TTGATTCGTAACTCGAACATTACCAGCCTGCAGTCGATTATGTTACGCAGCATACGTCATATTAACAACATTCCGTTCCT
CATTGATTTGATTGCTAACGTCATGAGCATTACTCTATCATTCCAGAATGCCTCAATGAACAAGTTGTTTGAGAAAGAGT
GTCGCAATGTTGCAACCAGAGCCCTTAAATATGTACGCCAGAAGAAAACTGAAGGGCGTCTGGATGAAGCATTGTCTGTA
TTGATTAGCCTGAAACGAATTGAGCCTGATGTTTCTCGTCTGATGCGTGAATATAAGCAAATTATCAGATTATTTAATGA
GTCACGGAAGGATGGCGGTAGCACTATCACGTCTTATGAACATCTAGACTATGCGAAAAAATTACTCGTTTTTGATAGCG
AAAATGCCTATGCCTTGAAATATGCCGCATTAAATGCAATGCATTTACGCGACTACACGCAGGCTTTGCAGTATTGGCAG
CGACTGGAGAAAGTGAATGGACCAACGGAGCCGGTGACAAGGCAGATCTCGACCTGCATAACCGCATTACAAAAAAATAC
ATCAGGGAAGTCGTAA

Upstream 100 bases:

>100_bases
TTGATATCAAAGAAGGACTTAAGCAGACTCTAAAATGGTATATCGATAAACATTCTACTTTGTATTCCTCGGTATAACTA
CTCACTTTCCTTTCACGTGG

Downstream 100 bases:

>100_bases
TGATTACGCAGGAAGAAAAGTTAGCTGCACTAGGAAAAACGTGTTTAACATTAAAACAAGAGAAGAAGCTTGCGCAAGCT
GTTGCGTTAATTGACAGTGA

Product: VI polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 831; Mature: 831

Protein sequence:

>831_residues
MNLMKSSGMFTLTAIGSCRIVSPVKRAQPYFNFQANFKRIYGFTHTSSEALQQIRFILGLIDIPEKVRPFIFRPNVNYSN
TDVHSRSDFYIIEISSQKKIMAYGFCLQINYLTRHFYEFFSQTERACMYWSLATQGNRHKLLAYLKDDPCFAGMSEDDRA
LLSNINVEQMDEHAIEQDMMEIVQLLGRDRVMFMTHVDAVTRAGTVILSRSRLIKNVDTIAARMDIPCVNPTNLMEKWGQ
KRALEKNGDDLTHYTDMFGDAIVAAIFKGVINNTNHHLDEGRQEKQDQIREITLSITKQLADGDIIAASQQLFAALRNQQ
QDPVLIQLRSVIFSHLGYYEQAYQDISDVEKIIGTTDSTLRCRLRSLHGLARWREALSTAEMMLSNEIEDEEVLTVAAGS
ADALQLFDKSYHYWKRVLLLNPETQSGWVNFLSSTQYFNDGNAFSEAFHAGIQSQRLNDTFMETALSLAIKFSDELIFMH
ALEQLLRHESEFALTVLSTIHDTGLVIRTAFCIKNMSYHQALRTSYKDKIHDVFEAWNNTALSLHSVDDFVSLSTSLAYS
YSAFMVYPHSRISRFNNEVKMAWRDKLREMYEREDYENILAGAKIVWPLLKFDPVGTVYCARTLVNLGAWKDACTLAHMT
LIRNSNITSLQSIMLRSIRHINNIPFLIDLIANVMSITLSFQNASMNKLFEKECRNVATRALKYVRQKKTEGRLDEALSV
LISLKRIEPDVSRLMREYKQIIRLFNESRKDGGSTITSYEHLDYAKKLLVFDSENAYALKYAALNAMHLRDYTQALQYWQ
RLEKVNGPTEPVTRQISTCITALQKNTSGKS

Sequences:

>Translated_831_residues
MNLMKSSGMFTLTAIGSCRIVSPVKRAQPYFNFQANFKRIYGFTHTSSEALQQIRFILGLIDIPEKVRPFIFRPNVNYSN
TDVHSRSDFYIIEISSQKKIMAYGFCLQINYLTRHFYEFFSQTERACMYWSLATQGNRHKLLAYLKDDPCFAGMSEDDRA
LLSNINVEQMDEHAIEQDMMEIVQLLGRDRVMFMTHVDAVTRAGTVILSRSRLIKNVDTIAARMDIPCVNPTNLMEKWGQ
KRALEKNGDDLTHYTDMFGDAIVAAIFKGVINNTNHHLDEGRQEKQDQIREITLSITKQLADGDIIAASQQLFAALRNQQ
QDPVLIQLRSVIFSHLGYYEQAYQDISDVEKIIGTTDSTLRCRLRSLHGLARWREALSTAEMMLSNEIEDEEVLTVAAGS
ADALQLFDKSYHYWKRVLLLNPETQSGWVNFLSSTQYFNDGNAFSEAFHAGIQSQRLNDTFMETALSLAIKFSDELIFMH
ALEQLLRHESEFALTVLSTIHDTGLVIRTAFCIKNMSYHQALRTSYKDKIHDVFEAWNNTALSLHSVDDFVSLSTSLAYS
YSAFMVYPHSRISRFNNEVKMAWRDKLREMYEREDYENILAGAKIVWPLLKFDPVGTVYCARTLVNLGAWKDACTLAHMT
LIRNSNITSLQSIMLRSIRHINNIPFLIDLIANVMSITLSFQNASMNKLFEKECRNVATRALKYVRQKKTEGRLDEALSV
LISLKRIEPDVSRLMREYKQIIRLFNESRKDGGSTITSYEHLDYAKKLLVFDSENAYALKYAALNAMHLRDYTQALQYWQ
RLEKVNGPTEPVTRQISTCITALQKNTSGKS
>Mature_831_residues
MNLMKSSGMFTLTAIGSCRIVSPVKRAQPYFNFQANFKRIYGFTHTSSEALQQIRFILGLIDIPEKVRPFIFRPNVNYSN
TDVHSRSDFYIIEISSQKKIMAYGFCLQINYLTRHFYEFFSQTERACMYWSLATQGNRHKLLAYLKDDPCFAGMSEDDRA
LLSNINVEQMDEHAIEQDMMEIVQLLGRDRVMFMTHVDAVTRAGTVILSRSRLIKNVDTIAARMDIPCVNPTNLMEKWGQ
KRALEKNGDDLTHYTDMFGDAIVAAIFKGVINNTNHHLDEGRQEKQDQIREITLSITKQLADGDIIAASQQLFAALRNQQ
QDPVLIQLRSVIFSHLGYYEQAYQDISDVEKIIGTTDSTLRCRLRSLHGLARWREALSTAEMMLSNEIEDEEVLTVAAGS
ADALQLFDKSYHYWKRVLLLNPETQSGWVNFLSSTQYFNDGNAFSEAFHAGIQSQRLNDTFMETALSLAIKFSDELIFMH
ALEQLLRHESEFALTVLSTIHDTGLVIRTAFCIKNMSYHQALRTSYKDKIHDVFEAWNNTALSLHSVDDFVSLSTSLAYS
YSAFMVYPHSRISRFNNEVKMAWRDKLREMYEREDYENILAGAKIVWPLLKFDPVGTVYCARTLVNLGAWKDACTLAHMT
LIRNSNITSLQSIMLRSIRHINNIPFLIDLIANVMSITLSFQNASMNKLFEKECRNVATRALKYVRQKKTEGRLDEALSV
LISLKRIEPDVSRLMREYKQIIRLFNESRKDGGSTITSYEHLDYAKKLLVFDSENAYALKYAALNAMHLRDYTQALQYWQ
RLEKVNGPTEPVTRQISTCITALQKNTSGKS

Specific function: May be required for maturation of the Vi polysaccharide

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TVID_SALTI (Q04974)

Other databases:

- EMBL:   D14156
- EMBL:   AL627283
- EMBL:   AE014613
- EMBL:   X67785
- PIR:   D36892
- RefSeq:   NP_458738.1
- RefSeq:   NP_807943.1
- ProteinModelPortal:   Q04974
- GeneID:   1070267
- GeneID:   1250860
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AL513382_GR
- KEGG:   stt:t4350
- KEGG:   sty:STY4659
- HOGENOM:   HBG675567
- OMA:   REDYENI
- ProtClustDB:   PRK15180
- BioCyc:   SENT209261:T4350-MONOMER
- BioCyc:   SENT220341:STY4659-MONOMER
- GO:   GO:0005488
- InterPro:   IPR011990
- Gene3D:   G3DSA:1.25.40.10

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 95439; Mature: 95439

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLMKSSGMFTLTAIGSCRIVSPVKRAQPYFNFQANFKRIYGFTHTSSEALQQIRFILGL
CCCCCCCCCEEEEECCCCEEECHHHHCCCCCCCCCCHHHHEEECCCCHHHHHHHHHHHHH
IDIPEKVRPFIFRPNVNYSNTDVHSRSDFYIIEISSQKKIMAYGFCLQINYLTRHFYEFF
HCCCHHCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEHHHHHHHHHHHH
SQTERACMYWSLATQGNRHKLLAYLKDDPCFAGMSEDDRALLSNINVEQMDEHAIEQDMM
HHHHHHEEEEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHH
EIVQLLGRDRVMFMTHVDAVTRAGTVILSRSRLIKNVDTIAARMDIPCVNPTNLMEKWGQ
HHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
KRALEKNGDDLTHYTDMFGDAIVAAIFKGVINNTNHHLDEGRQEKQDQIREITLSITKQL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHH
ADGDIIAASQQLFAALRNQQQDPVLIQLRSVIFSHLGYYEQAYQDISDVEKIIGTTDSTL
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
RCRLRSLHGLARWREALSTAEMMLSNEIEDEEVLTVAAGSADALQLFDKSYHYWKRVLLL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHEEEEE
NPETQSGWVNFLSSTQYFNDGNAFSEAFHAGIQSQRLNDTFMETALSLAIKFSDELIFMH
CCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHCCHHHHHH
ALEQLLRHESEFALTVLSTIHDTGLVIRTAFCIKNMSYHQALRTSYKDKIHDVFEAWNNT
HHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
ALSLHSVDDFVSLSTSLAYSYSAFMVYPHSRISRFNNEVKMAWRDKLREMYEREDYENIL
EEEEECHHHHHHHHHHHHHEEEEEEEECHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHH
AGAKIVWPLLKFDPVGTVYCARTLVNLGAWKDACTLAHMTLIRNSNITSLQSIMLRSIRH
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
INNIPFLIDLIANVMSITLSFQNASMNKLFEKECRNVATRALKYVRQKKTEGRLDEALSV
HCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LISLKRIEPDVSRLMREYKQIIRLFNESRKDGGSTITSYEHLDYAKKLLVFDSENAYALK
HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEECCCCEEEH
YAALNAMHLRDYTQALQYWQRLEKVNGPTEPVTRQISTCITALQKNTSGKS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNLMKSSGMFTLTAIGSCRIVSPVKRAQPYFNFQANFKRIYGFTHTSSEALQQIRFILGL
CCCCCCCCCEEEEECCCCEEECHHHHCCCCCCCCCCHHHHEEECCCCHHHHHHHHHHHHH
IDIPEKVRPFIFRPNVNYSNTDVHSRSDFYIIEISSQKKIMAYGFCLQINYLTRHFYEFF
HCCCHHCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEHHHHHHHHHHHH
SQTERACMYWSLATQGNRHKLLAYLKDDPCFAGMSEDDRALLSNINVEQMDEHAIEQDMM
HHHHHHEEEEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHH
EIVQLLGRDRVMFMTHVDAVTRAGTVILSRSRLIKNVDTIAARMDIPCVNPTNLMEKWGQ
HHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
KRALEKNGDDLTHYTDMFGDAIVAAIFKGVINNTNHHLDEGRQEKQDQIREITLSITKQL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHH
ADGDIIAASQQLFAALRNQQQDPVLIQLRSVIFSHLGYYEQAYQDISDVEKIIGTTDSTL
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
RCRLRSLHGLARWREALSTAEMMLSNEIEDEEVLTVAAGSADALQLFDKSYHYWKRVLLL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHEEEEE
NPETQSGWVNFLSSTQYFNDGNAFSEAFHAGIQSQRLNDTFMETALSLAIKFSDELIFMH
CCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHCCHHHHHH
ALEQLLRHESEFALTVLSTIHDTGLVIRTAFCIKNMSYHQALRTSYKDKIHDVFEAWNNT
HHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
ALSLHSVDDFVSLSTSLAYSYSAFMVYPHSRISRFNNEVKMAWRDKLREMYEREDYENIL
EEEEECHHHHHHHHHHHHHEEEEEEEECHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHH
AGAKIVWPLLKFDPVGTVYCARTLVNLGAWKDACTLAHMTLIRNSNITSLQSIMLRSIRH
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
INNIPFLIDLIANVMSITLSFQNASMNKLFEKECRNVATRALKYVRQKKTEGRLDEALSV
HCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LISLKRIEPDVSRLMREYKQIIRLFNESRKDGGSTITSYEHLDYAKKLLVFDSENAYALK
HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEECCCCEEEH
YAALNAMHLRDYTQALQYWQRLEKVNGPTEPVTRQISTCITALQKNTSGKS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8331073; 11677608; 12644504; 8248629