Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is 29144563
Identifier: 29144563
GI number: 29144563
Start: 4470192
End: 4470770
Strand: Reverse
Name: 29144563
Synonym: t4309
Alternate gene names: NA
Gene position: 4470770-4470192 (Counterclockwise)
Preceding gene: 29144564
Following gene: 29144562
Centisome position: 93.3
GC content: 59.07
Gene sequence:
>579_bases ATGAATGCACAACTGACCGAAATCATGCGCCTTATCACCAACCTGATCCGCACCGGCACCGTGACCGAAGTGGACCGGGA AAACTGGCTGTGCCGGGTGAAAGTGGGCGAGCTTGAAACTAACTGGATTAACTGGCTGACGCTGCGTGCCGGTGGTGCCC GTACATGGTGGTGCCCGTCGCCGGATGAGCAGGTGGTGGTGCTGAGCATGGGCGGCAATCTGGAAACCGCTTTTGTGCTG CCCGCCATCTACTCCAATCAGTTTGCGCCGCCGTCGGATTCTGTGGACGGCTGCGTGACGGAGTACCCGGACGGGGGCTG GTTTGAGTACGAACCCGCCACCGGGAGGTGGCATGTCCGGGGTATCAAATCCATGGTGATCGAGGCGGCGGACAATATCA CCCTAAAAACCGGTGAGTTTGTGGTGGAGGCTGACACAACACGCATTAATAGCGAGGTGGTGATCAACGGCGGCGTCACC CAGGGCGGCGGCGCAATGAGTTCTAACGGGGTCGTGATGGATAAACACGGTCACACTGGCGTTAAGTCAGGCGGGGATAC ATCGGGAGGTCCGGTATGA
Upstream 100 bases:
>100_bases GTGACACTCTGCTGCGCTGGCTGGCGGGGTGATCTTTGTGCCACTGCTGGCACAAGCGCCCGCGCTGCCTCCCTTTTCCC TCTGATGGCAACCTTTCGTT
Downstream 100 bases:
>100_bases CGTTGTATATCGGTATGAGCAGGAATGACGGGCAGGTCATTGCAGATACCGACCATCTGCGCCAGTCGGTGCGGGATATT CTGCTGACGCCGCAGGGCAG
Product: phage baseplate assembly protein
Products: NA
Alternate protein names: Baseplate Assembly Protein V; Phage Baseplate Assembly Protein; Phage-Related Baseplate Protein; Phage-Related Baseplate Assembly Protein; Baseplate Assembly Protein GpV; Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein V; Phage P2 Baseplate Assembly GpV-Like Protein; Phage P2-Like Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV Protein; Bacteriophage Baseplate Protein; Bacteriophage Baseplate Assembly Protein V; Phage Tail Spike Protein; Phage Baseplate Assembly; Phage Baseplate Assembly-Like Protein; Phage Baseplate Component; Bacteriophage P2 Baseplate Assembly Protein GPV; Prophage LambdaW5 Baseplate Assembly Protein V; Phage Baseplate Protein; Baseplate Assembly Protein V Prophage; Prophage Baseplate Assembly Protein
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MNAQLTEIMRLITNLIRTGTVTEVDRENWLCRVKVGELETNWINWLTLRAGGARTWWCPSPDEQVVVLSMGGNLETAFVL PAIYSNQFAPPSDSVDGCVTEYPDGGWFEYEPATGRWHVRGIKSMVIEAADNITLKTGEFVVEADTTRINSEVVINGGVT QGGGAMSSNGVVMDKHGHTGVKSGGDTSGGPV
Sequences:
>Translated_192_residues MNAQLTEIMRLITNLIRTGTVTEVDRENWLCRVKVGELETNWINWLTLRAGGARTWWCPSPDEQVVVLSMGGNLETAFVL PAIYSNQFAPPSDSVDGCVTEYPDGGWFEYEPATGRWHVRGIKSMVIEAADNITLKTGEFVVEADTTRINSEVVINGGVT QGGGAMSSNGVVMDKHGHTGVKSGGDTSGGPV >Mature_192_residues MNAQLTEIMRLITNLIRTGTVTEVDRENWLCRVKVGELETNWINWLTLRAGGARTWWCPSPDEQVVVLSMGGNLETAFVL PAIYSNQFAPPSDSVDGCVTEYPDGGWFEYEPATGRWHVRGIKSMVIEAADNITLKTGEFVVEADTTRINSEVVINGGVT QGGGAMSSNGVVMDKHGHTGVKSGGDTSGGPV
Specific function: Unknown
COG id: COG4540
COG function: function code R; Phage P2 baseplate assembly protein gpV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20730; Mature: 20730
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAQLTEIMRLITNLIRTGTVTEVDRENWLCRVKVGELETNWINWLTLRAGGARTWWCPS CCCHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCEECCEEEEEEEECCCCEEECCCC PDEQVVVLSMGGNLETAFVLPAIYSNQFAPPSDSVDGCVTEYPDGGWFEYEPATGRWHVR CCCCEEEEEECCCEEEEEEEEHHHCCCCCCCCCCCCCCEEECCCCCEEEECCCCCEEEEH GIKSMVIEAADNITLKTGEFVVEADTTRINSEVVINGGVTQGGGAMSSNGVVMDKHGHTG HHHHHHHHHCCCEEEECCCEEEEECCEECCCEEEEECCCCCCCCCCCCCCEEEECCCCCC VKSGGDTSGGPV CCCCCCCCCCCC >Mature Secondary Structure MNAQLTEIMRLITNLIRTGTVTEVDRENWLCRVKVGELETNWINWLTLRAGGARTWWCPS CCCHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCEECCEEEEEEEECCCCEEECCCC PDEQVVVLSMGGNLETAFVLPAIYSNQFAPPSDSVDGCVTEYPDGGWFEYEPATGRWHVR CCCCEEEEEECCCEEEEEEEEHHHCCCCCCCCCCCCCCEEECCCCCEEEECCCCCEEEEH GIKSMVIEAADNITLKTGEFVVEADTTRINSEVVINGGVTQGGGAMSSNGVVMDKHGHTG HHHHHHHHHCCCEEEECCCEEEEECCEECCCEEEEECCCCCCCCCCCCCCEEEECCCCCC VKSGGDTSGGPV CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA