| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29144513
Identifier: 29144513
GI number: 29144513
Start: 4425085
End: 4425636
Strand: Direct
Name: 29144513
Synonym: t4257
Alternate gene names: NA
Gene position: 4425085-4425636 (Clockwise)
Preceding gene: 29144512
Following gene: 29144514
Centisome position: 92.34
GC content: 51.45
Gene sequence:
>552_bases GTGGCAACTGAAGTCGGCGTACCCGCTGAAGCCCTGTATTCAGTTTCTCTTGCAGAAACATCCCGAAAACTACCACATGG AGAGCGACCGTGGCCGTGGACACTCAATGTTGCCGGGAAAGGGTATCGGTATAACTCCCGCCAGGAAGCGTATGACGCAA TGTTGTCGTTCATGCGTCGCTATCCGTTAAAGCGGATTGATGTTGGGATCGCGCAGGTTAACCTGGGCTGGAATGGAACT TATTTCAGCAGTTACTACGAAGCGCTGGATCCATATACCAACCTTCGGGTTGCCGCCCGTATTCTTAAATCCTGTTATGA CAACAATCCGGGAAGCTGGATACAGGCCGCGGGGTGTTATCACCATCCTGCAGGTGGAAAACCAGCACGAATCTATAAGT CCATCGTGAAACGCAAGCTGGCAACACTGGATTTAAACGCGCCAGTAACGTACTCCGAACTTCAGATCGCACAGATATCG CCATCACAGCGCCATTTCTCACACTACAACCGTGAATTGCAATGGGTTGAACCCAGGGAGTCCCGTCAGTGA
Upstream 100 bases:
>100_bases CAGCGTCCCTGTTCTGATCCTTCTTATCGGGGGTGTTGGTAGTGCAGCTGCGGTAGAAAAGGGACGCGGTCTGCAAACAA TTCCCCCGGGTTACCACCTT
Downstream 100 bases:
>100_bases AACTTTATTCTGTCTGTTTTTTTTTCAGGACATTAATGGTCAGTATTTTGCTGACAACATCATCGATGGCAGCACTCAAT GTGATTGCTGATCTTGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transglycosylase Slt Family; Transglycosylase SLT Domain-Containing Protein; Lytic Transglycosylase; Signal Peptide; Soluble Lytic Murein Transglycosylase; VirB1 Protein; Type IV Secretory Pathway Lytic Transglycosylase; Transglycosylase SLT Family Protein; Slt Family Transglycosylase; Transglycosylase SLT Domain-Containing
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MATEVGVPAEALYSVSLAETSRKLPHGERPWPWTLNVAGKGYRYNSRQEAYDAMLSFMRRYPLKRIDVGIAQVNLGWNGT YFSSYYEALDPYTNLRVAARILKSCYDNNPGSWIQAAGCYHHPAGGKPARIYKSIVKRKLATLDLNAPVTYSELQIAQIS PSQRHFSHYNRELQWVEPRESRQ
Sequences:
>Translated_183_residues MATEVGVPAEALYSVSLAETSRKLPHGERPWPWTLNVAGKGYRYNSRQEAYDAMLSFMRRYPLKRIDVGIAQVNLGWNGT YFSSYYEALDPYTNLRVAARILKSCYDNNPGSWIQAAGCYHHPAGGKPARIYKSIVKRKLATLDLNAPVTYSELQIAQIS PSQRHFSHYNRELQWVEPRESRQ >Mature_182_residues ATEVGVPAEALYSVSLAETSRKLPHGERPWPWTLNVAGKGYRYNSRQEAYDAMLSFMRRYPLKRIDVGIAQVNLGWNGTY FSSYYEALDPYTNLRVAARILKSCYDNNPGSWIQAAGCYHHPAGGKPARIYKSIVKRKLATLDLNAPVTYSELQIAQISP SQRHFSHYNRELQWVEPRESRQ
Specific function: Unknown
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20928; Mature: 20797
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATEVGVPAEALYSVSLAETSRKLPHGERPWPWTLNVAGKGYRYNSRQEAYDAMLSFMRR CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHH YPLKRIDVGIAQVNLGWNGTYFSSYYEALDPYTNLRVAARILKSCYDNNPGSWIQAAGCY CCHHHHCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEECCCC HHPAGGKPARIYKSIVKRKLATLDLNAPVTYSELQIAQISPSQRHFSHYNRELQWVEPRE CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHCCCEEEECCCC SRQ CCC >Mature Secondary Structure ATEVGVPAEALYSVSLAETSRKLPHGERPWPWTLNVAGKGYRYNSRQEAYDAMLSFMRR CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHH YPLKRIDVGIAQVNLGWNGTYFSSYYEALDPYTNLRVAARILKSCYDNNPGSWIQAAGCY CCHHHHCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEECCCC HHPAGGKPARIYKSIVKRKLATLDLNAPVTYSELQIAQISPSQRHFSHYNRELQWVEPRE CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHCCCEEEECCCC SRQ CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA