Click here to switch to the map view.

The map label for this gene is pilT [H]

Identifier: 29144505

GI number: 29144505

Start: 4417202

End: 4417678

Strand: Direct

Name: pilT [H]

Synonym: t4248

Alternate gene names: 29144505

Gene position: 4417202-4417678 (Clockwise)

Preceding gene: 29144504

Following gene: 29144506

Centisome position: 92.18

GC content: 49.27

Gene sequence:

>477_bases
ATGTGTGGATATTTTTCCCGACTGGCTTTATTCATGACGCTGTGCAGTGTGCCGCTGTGGGTACAGGCATTCTGCTTTGA
TGCCGCTGCGGCGAAATACCATGTCTCCCCGCTGCTGATTAAGTCCATGGCCATTGGTGAAAGTAATCTTGATCCGCATG
CAACAAATGATAACCGGGACAAAAAAACGGGGAAAATCAAAAGCACGGATTATGGACTGATGATGGTGAATTCTACGCAT
ATTCCCCGTCTTGTCTCGATGGGGGTCATCAGGGACAAAAATGATTTGCTGAACAAACCCTGCCTGAATGTGCAGATTGG
AACGTGGATCCTTGCGAAACATTTTCAGGTCTGTGGGGTGAGCTGGAACTGCCTGGGCTCTTATAACGCAGGTTTCCGGC
CTGACCGGCATGAAACACGGGAGCGTTATGCAAACCGGATCTGGAAAATTTATCAGCGGCAAACGGGGGCTCAATGA

Upstream 100 bases:

>100_bases
GAAAGTAACGGCAGAAATCGCGAGCAGTGAATGCACTGCAGATAATGGCCGGACCGGTACCAATACGCTGGTTTTTAACT
ACAACGGCTGAGGAGGCGGG

Downstream 100 bases:

>100_bases
CAGTCTCTCTTATCGGTACCATTTTTCCTCCTGTGTATGCCATACCTGCTTTTATCGGGTGCGCCATTTTCGGGGCGGTA
CTTTTAAGGCCGGTACGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MCGYFSRLALFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTH
IPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYANRIWKIYQRQTGAQ

Sequences:

>Translated_158_residues
MCGYFSRLALFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTH
IPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYANRIWKIYQRQTGAQ
>Mature_158_residues
MCGYFSRLALFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTH
IPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYANRIWKIYQRQTGAQ

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iagB/ipgF/P19 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 17959; Mature: 17959

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGYFSRLALFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRD
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCC
KKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGV
CCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCCHHHHCCCCCEEEHHHHHHHHHHHHCCC
SWNCLGSYNAGFRPDRHETRERYANRIWKIYQRQTGAQ
CEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MCGYFSRLALFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRD
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCC
KKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGV
CCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCCHHHHCCCCCEEEHHHHHHHHHHHHCCC
SWNCLGSYNAGFRPDRHETRERYANRIWKIYQRQTGAQ
CEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]