Click here to switch to the map view.

The map label for this gene is yjcB [H]

Identifier: 29144431

GI number: 29144431

Start: 4331312

End: 4331593

Strand: Reverse

Name: yjcB [H]

Synonym: t4169

Alternate gene names: 29144431

Gene position: 4331593-4331312 (Counterclockwise)

Preceding gene: 29144433

Following gene: 29144422

Centisome position: 90.39

GC content: 53.55

Gene sequence:

>282_bases
ATGGCTGCCATAACCACTGGTGTCGTTCTTCTCCGCTGGCAACTGTTGAGCGCCGTGCTCATGTTTTTAGCCAGCACGCT
CAATATCCGTTTCCGTAAATCAGATTATATTGGTCTGGCGGTGATCAGTAGCGGTCTGGGCGTGGTATCCGCCTGCTGGT
TTGCCACCGGTTTACTCGGTATTACCATGATGGATCTCGCTGCGATCTGGCATAACATTGAAGCCGTGATGGTCGAAACG
ATGAGCCAGACCCCGCCAGAATGGCCGATGGTGCTGACCTGA

Upstream 100 bases:

>100_bases
CGATGTTGATGTGACGTCCGTTGATAGCCAGAATGTCCCACGTTTCCCGGGAACAACGCCGTGCTGTCCTGGACAAAGGT
CTATTCAGAGGAAATGTTTC

Downstream 100 bases:

>100_bases
TACGCTATCGCTGCCGCTGAAGTCGCCCACCGGTTATCTCAAGGCGGAATCGCGCGCCAGGGGTAGCCTTGCGAACCATC
ACGTCCCTCGCATTGCCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MAAITTGVVLLRWQLLSAVLMFLASTLNIRFRKSDYIGLAVISSGLGVVSACWFATGLLGITMMDLAAIWHNIEAVMVET
MSQTPPEWPMVLT

Sequences:

>Translated_93_residues
MAAITTGVVLLRWQLLSAVLMFLASTLNIRFRKSDYIGLAVISSGLGVVSACWFATGLLGITMMDLAAIWHNIEAVMVET
MSQTPPEWPMVLT
>Mature_92_residues
AAITTGVVLLRWQLLSAVLMFLASTLNIRFRKSDYIGLAVISSGLGVVSACWFATGLLGITMMDLAAIWHNIEAVMVETM
SQTPPEWPMVLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082365, Length=93, Percent_Identity=83.8709677419355, Blast_Score=167, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016958
- ProDom:   PD064934 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10143; Mature: 10012

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAITTGVVLLRWQLLSAVLMFLASTLNIRFRKSDYIGLAVISSGLGVVSACWFATGLLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHH
ITMMDLAAIWHNIEAVMVETMSQTPPEWPMVLT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECC
>Mature Secondary Structure 
AAITTGVVLLRWQLLSAVLMFLASTLNIRFRKSDYIGLAVISSGLGVVSACWFATGLLG
CCHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHH
ITMMDLAAIWHNIEAVMVETMSQTPPEWPMVLT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]