| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
Click here to switch to the map view.
The map label for this gene is smg [H]
Identifier: 29144365
GI number: 29144365
Start: 4238442
End: 4238915
Strand: Direct
Name: smg [H]
Synonym: t4100
Alternate gene names: 29144365
Gene position: 4238442-4238915 (Clockwise)
Preceding gene: 29144364
Following gene: 29144366
Centisome position: 88.45
GC content: 47.68
Gene sequence:
>474_bases ATGTTCGACGTACTAATGTATTTGTTTGAAACATACATCCATAACGAAGCCGAGCTGCGCGTGGATCAGGACAGACTGGA GCGTGATCTCACCGACGCTGGGTTTGATCGCGAAGACATCTACAATGCGCTGCTGTGGCTGGAAAAACTCGCTGACTATC AGGATGGCCTCGCGGAACCCATGCAACTTGCTTCCGACCCTCTTTCAATGCGCATTTATACGGTTGAAGAATGTGAAAGG CTTGATGCCAGTTGCCGGGGGTTCCTGTTATTCCTTGAGCAGATTCAGGTGCTAAACCTCGAAACACGAGAAATGGTGAT TGAGCGTGTGCTGGCGCTGGATACCGCAGAGTTTGACCTGGAAGACTTGAAATGGGTTATTTTGATGGTGTTATTCAACA TTCCGGGCTGTGAAAACGCCTATCAGCAAATGGAAGAATTACTCTTTGAGGTAAATGAAGGTATGCTGCATTGA
Upstream 100 bases:
>100_bases CAACCTGTGCCAGCGGTAGTGGCTCAGCTACTCGAACTGGAGTTAGCAGGATGGATCGCAGCTGTACCCGGCGGCTATGT CCGATTAAGGAGGGCAAGCC
Downstream 100 bases:
>100_bases TAGGTGTTAATGCTGCATGAGTGAATATGGCTAAATCAGCACTGTTTTCGGTGCGTAAAAATGAGCCCTGCCCGCAGTGC GGGGCCGAACTGGTAATTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MFDVLMYLFETYIHNEAELRVDQDRLERDLTDAGFDREDIYNALLWLEKLADYQDGLAEPMQLASDPLSMRIYTVEECER LDASCRGFLLFLEQIQVLNLETREMVIERVLALDTAEFDLEDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH
Sequences:
>Translated_157_residues MFDVLMYLFETYIHNEAELRVDQDRLERDLTDAGFDREDIYNALLWLEKLADYQDGLAEPMQLASDPLSMRIYTVEECER LDASCRGFLLFLEQIQVLNLETREMVIERVLALDTAEFDLEDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH >Mature_157_residues MFDVLMYLFETYIHNEAELRVDQDRLERDLTDAGFDREDIYNALLWLEKLADYQDGLAEPMQLASDPLSMRIYTVEECER LDASCRGFLLFLEQIQVLNLETREMVIERVLALDTAEFDLEDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH
Specific function: Unknown
COG id: COG2922
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the smg family [H]
Homologues:
Organism=Escherichia coli, GI1789679, Length=157, Percent_Identity=94.2675159235669, Blast_Score=300, Evalue=3e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007456 [H]
Pfam domain/function: PF04361 DUF494 [H]
EC number: NA
Molecular weight: Translated: 18540; Mature: 18540
Theoretical pI: Translated: 3.81; Mature: 3.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDVLMYLFETYIHNEAELRVDQDRLERDLTDAGFDREDIYNALLWLEKLADYQDGLAEP CHHHHHHHHHHHHCCHHHHEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHH MQLASDPLSMRIYTVEECERLDASCRGFLLFLEQIQVLNLETREMVIERVLALDTAEFDL HHHHCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCH EDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFDVLMYLFETYIHNEAELRVDQDRLERDLTDAGFDREDIYNALLWLEKLADYQDGLAEP CHHHHHHHHHHHHCCHHHHEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHH MQLASDPLSMRIYTVEECERLDASCRGFLLFLEQIQVLNLETREMVIERVLALDTAEFDL HHHHCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCH EDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA