| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
Click here to switch to the map view.
The map label for this gene is fusA [H]
Identifier: 29144324
GI number: 29144324
Start: 4212478
End: 4214592
Strand: Direct
Name: fusA [H]
Synonym: t4059
Alternate gene names: 29144324
Gene position: 4212478-4214592 (Clockwise)
Preceding gene: 29144323
Following gene: 29144325
Centisome position: 87.91
GC content: 51.77
Gene sequence:
>2115_bases ATGGCTCGTACAACACCCATCGCACGCTACCGTAATATCGGTATCAGTGCGCACATCGACGCCGGTAAAACCACTACTAC CGAACGTATTCTGTTCTACACCGGTGTAAACCACAAAATCGGTGAAGTTCATGACGGCGCAGCTACCATGGACTGGATGG AGCAGGAGCAGGAGCGTGGTATTACTATCACCTCCGCAGCGACTACTGCATTCTGGTCTGGTATGGCTAAGCAGTATGAA CCGCATCGCATCAACATCATCGACACCCCGGGGCACGTTGACTTCACTATCGAAGTAGAACGTTCCATGCGTGTTCTCGA TGGTGCGGTAATGGTTTACTGCGCAGTTGGTGGTGTTCAGCCGCAGTCTGAAACCGTATGGCGTCAGGCAAACAAATACA AAGTTCCGCGCATTGCGTTCGTTAACAAAATGGACCGCATGGGCGCGAACTTCCTGAAAGTTGTTGGTCAGATCAAAACC CGTCTGGGCGCGAACCCGGTTCCGCTGCAGCTGGCAATTGGTGCTGAAGAAGGTTTCACCGGCGTTGTTGACCTGGTGAA AATGAAAGCCATCAACTGGAACGATGCCGACCAGGGCGTTACCTTCGAATACGAAGATATCCCGGCTGACATGCAGGACC TGGCTAACGAATGGCACCAGAACCTGATCGAGTCCGCCGCAGAAGCTTCTGAAGAGCTGATGGAAAAATACCTGGGTGGT GAAGAACTGACTGAAGAAGAGATCAAACAAGCTCTGCGTCAGCGCGTTCTGAACAACGAAATCATCCTGGTAACCTGTGG TTCTGCATTTAAGAACAAAGGTGTTCAGGCGATGCTGGATGCGGTAATTGATTACCTGCCATCCCCGGTAGACGTACCTG CGATCAACGGTATTCTGGACGACGGTAAAGATACTCCGGCTGAGCGTCACGCAAGCGACGACGAGCCGTTCTCTGCGCTG GCGTTCAAAATCGCTACCGACCCGTTTGTGGGTAACCTGACCTTCTTCCGTGTGTACTCCGGTGTGGTTAACTCTGGTGA TACCGTACTGAACTCCGTGAAAACCGCACGTGAGCGTTTCGGTCGTATCGTTCAGATGCACGCTAACAAACGTGAAGAGA TCAAAGAAGTTCGCGCGGGCGACATCGCGGCTGCTATCGGCCTGAAAGACGTGACTACCGGTGACACCCTGTGTGATCCG GAAAACCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCGGTAGAACCGAAAACCAAAGCTGA CCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCGAAAGAAGACCCGTCGTTCCGCGTATGGACTGATGAAGAATCTA ACCAGACCATCATCGCTGGTATGGGTGAACTTCACCTAGATATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAA GCGAACGTGGGTAAACCTCAGGTTGCTTACCGCGAAGCGATTCGCGCGAAAGTTACCGACATCGAAGGTAAACACGCGAA ACAGTCTGGTGGTCGCGGTCAGTATGGTCATGTTGTTATCGACATGTACCCGCTGGAGCCGGGCTCTAACCCGAAAGGTT ACGAGTTCATCAACGACATCAAAGGTGGTGTAATTCCTGGCGAGTACATCCCGGCCGTTGATAAAGGCATCCAGGAGCAG CTGAAATCTGGCCCGCTGGCGGGTTATCCGGTAGTTGATCTCGGTGTGCGTCTGCACTTCGGTTCTTACCATGACGTTGA CTCCTCTGAGCTGGCGTTTAAACTGGCTGCGTCTATCGCCTTTAAAGAAGGCTTTAAGAAAGCAAAACCAGTTCTGCTTG AGCCGATCATGAAGGTTGAAGTAGAAACACCTGAAGAGAATACCGGTGACGTTATCGGCGACCTTAGCCGCCGTCGTGGT ATGCTCAAAGGTCAGGAATCTGAAGTTACAGGCGTTAAGATCCACGCTGAAGTACCGCTGTCTGAAATGTTCGGATATGC AACTCAGCTGCGTTCTCTGACCAAAGGTCGCGCATCGTACACTATGGAATTCCTGAAGTATGATGATGCGCCGAACAACG TTGCTCAGGCCGTAATCGAAGCCCGTGGTAAATAA
Upstream 100 bases:
>100_bases GTAATCCCTTCGGAGTCATAGTCACCAGGCGGGCGCTTCAGGTAAGTCGCCCGTTTTGGATAACTTAACTGAACGCCTAA AGATATCAACGAGGAATCAA
Downstream 100 bases:
>100_bases GCCGCAGGGTTAAAAACCAAAATCCCGTGCTCTCTCCTGAAGGGGAGAGCGCTATAGTAAGGAATATAGCCGTGTCTAAA GAAAAATTTGAACGTACAAA
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 704; Mature: 703
Protein sequence:
>704_residues MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMAKQYE PHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVGQIKT RLGANPVPLQLAIGAEEGFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMQDLANEWHQNLIESAAEASEELMEKYLGG EELTEEEIKQALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSAL AFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKTARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDP ENPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVDRMKREFNVE ANVGKPQVAYREAIRAKVTDIEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPGEYIPAVDKGIQEQ LKSGPLAGYPVVDLGVRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRG MLKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTMEFLKYDDAPNNVAQAVIEARGK
Sequences:
>Translated_704_residues MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMAKQYE PHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVGQIKT RLGANPVPLQLAIGAEEGFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMQDLANEWHQNLIESAAEASEELMEKYLGG EELTEEEIKQALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSAL AFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKTARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDP ENPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVDRMKREFNVE ANVGKPQVAYREAIRAKVTDIEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPGEYIPAVDKGIQEQ LKSGPLAGYPVVDLGVRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRG MLKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTMEFLKYDDAPNNVAQAVIEARGK >Mature_703_residues ARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEP HRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVGQIKTR LGANPVPLQLAIGAEEGFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMQDLANEWHQNLIESAAEASEELMEKYLGGE ELTEEEIKQALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSALA FKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKTARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDPE NPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVDRMKREFNVEA NVGKPQVAYREAIRAKVTDIEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPGEYIPAVDKGIQEQL KSGPLAGYPVVDLGVRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRGM LKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTMEFLKYDDAPNNVAQAVIEARGK
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=703, Percent_Identity=44.950213371266, Blast_Score=572, Evalue=1e-163, Organism=Homo sapiens, GI19923640, Length=721, Percent_Identity=38.1414701803051, Blast_Score=441, Evalue=1e-123, Organism=Homo sapiens, GI25306287, Length=697, Percent_Identity=37.3027259684362, Blast_Score=368, Evalue=1e-102, Organism=Homo sapiens, GI25306283, Length=460, Percent_Identity=40.8695652173913, Blast_Score=301, Evalue=1e-81, Organism=Homo sapiens, GI157426893, Length=154, Percent_Identity=35.7142857142857, Blast_Score=100, Evalue=7e-21, Organism=Homo sapiens, GI94966754, Length=140, Percent_Identity=38.5714285714286, Blast_Score=98, Evalue=3e-20, Organism=Homo sapiens, GI4503483, Length=150, Percent_Identity=38.6666666666667, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI310132016, Length=123, Percent_Identity=39.8373983739837, Blast_Score=83, Evalue=1e-15, Organism=Homo sapiens, GI310110807, Length=123, Percent_Identity=39.8373983739837, Blast_Score=83, Evalue=1e-15, Organism=Homo sapiens, GI310123363, Length=123, Percent_Identity=39.8373983739837, Blast_Score=83, Evalue=1e-15, Organism=Homo sapiens, GI94966752, Length=68, Percent_Identity=45.5882352941176, Blast_Score=69, Evalue=2e-11, Organism=Escherichia coli, GI1789738, Length=704, Percent_Identity=97.5852272727273, Blast_Score=1417, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=485, Percent_Identity=26.5979381443299, Blast_Score=150, Evalue=3e-37, Organism=Escherichia coli, GI48994988, Length=152, Percent_Identity=40.1315789473684, Blast_Score=102, Evalue=6e-23, Organism=Escherichia coli, GI1788922, Length=155, Percent_Identity=35.4838709677419, Blast_Score=89, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17533571, Length=709, Percent_Identity=43.3004231311707, Blast_Score=532, Evalue=1e-151, Organism=Caenorhabditis elegans, GI17556745, Length=736, Percent_Identity=29.2119565217391, Blast_Score=297, Evalue=2e-80, Organism=Caenorhabditis elegans, GI17506493, Length=424, Percent_Identity=27.3584905660377, Blast_Score=105, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17557151, Length=172, Percent_Identity=37.7906976744186, Blast_Score=95, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71988819, Length=147, Percent_Identity=35.3741496598639, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71988811, Length=147, Percent_Identity=35.3741496598639, Blast_Score=83, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6323098, Length=696, Percent_Identity=43.1034482758621, Blast_Score=550, Evalue=1e-157, Organism=Saccharomyces cerevisiae, GI6322359, Length=799, Percent_Identity=30.6633291614518, Blast_Score=365, Evalue=1e-101, Organism=Saccharomyces cerevisiae, GI6324707, Length=480, Percent_Identity=26.25, Blast_Score=103, Evalue=8e-23, Organism=Saccharomyces cerevisiae, GI6320593, Length=480, Percent_Identity=26.25, Blast_Score=103, Evalue=8e-23, Organism=Saccharomyces cerevisiae, GI6323320, Length=155, Percent_Identity=35.4838709677419, Blast_Score=89, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6324166, Length=145, Percent_Identity=39.3103448275862, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI24582462, Length=707, Percent_Identity=44.978783592645, Blast_Score=592, Evalue=1e-169, Organism=Drosophila melanogaster, GI221458488, Length=744, Percent_Identity=32.258064516129, Blast_Score=365, Evalue=1e-101, Organism=Drosophila melanogaster, GI24585711, Length=814, Percent_Identity=26.7813267813268, Blast_Score=168, Evalue=1e-41, Organism=Drosophila melanogaster, GI24585713, Length=814, Percent_Identity=26.7813267813268, Blast_Score=168, Evalue=1e-41, Organism=Drosophila melanogaster, GI24585709, Length=814, Percent_Identity=26.7813267813268, Blast_Score=168, Evalue=1e-41, Organism=Drosophila melanogaster, GI21357743, Length=798, Percent_Identity=22.9323308270677, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI78706572, Length=186, Percent_Identity=34.4086021505376, Blast_Score=104, Evalue=2e-22, Organism=Drosophila melanogaster, GI28574573, Length=141, Percent_Identity=37.5886524822695, Blast_Score=84, Evalue=4e-16,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 77600; Mature: 77469
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERG CCCCCCCHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQ EEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECHHHHHHHHHEEEEEECCCCC PQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVGQIKTRLGANPVPLQLAIGAEEGFT CCHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCH GVVDLVKMKAINWNDADQGVTFEYEDIPADMQDLANEWHQNLIESAAEASEELMEKYLGG HHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EELTEEEIKQALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSPVDVPAINGILD CCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCCCCCCHHCCCCC DGKDTPAERHASDDEPFSALAFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKTARERF CCCCCCHHHCCCCCCCHHHEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH GRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDPENPIILERMEFPEPVISIAV HHHHHHHCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEE EPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVDRMKREFNVE CCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCCC ANVGKPQVAYREAIRAKVTDIEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDI CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHC KGGVIPGEYIPAVDKGIQEQLKSGPLAGYPVVDLGVRLHFGSYHDVDSSELAFKLAASIA CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECEEEEECCCCCCCCHHHHHHHHHHHH FKEGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPL HHHHHHHCCCHHHCCHHEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCH SEMFGYATQLRSLTKGRASYTMEFLKYDDAPNNVAQAVIEARGK HHHHHHHHHHHHHHCCHHHHEEHHHHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure ARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERG CCCCCCHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQ EEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECHHHHHHHHHEEEEEECCCCC PQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVGQIKTRLGANPVPLQLAIGAEEGFT CCHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCH GVVDLVKMKAINWNDADQGVTFEYEDIPADMQDLANEWHQNLIESAAEASEELMEKYLGG HHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EELTEEEIKQALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSPVDVPAINGILD CCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCCCCCCHHCCCCC DGKDTPAERHASDDEPFSALAFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKTARERF CCCCCCHHHCCCCCCCHHHEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH GRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDPENPIILERMEFPEPVISIAV HHHHHHHCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEE EPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVDRMKREFNVE CCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCCC ANVGKPQVAYREAIRAKVTDIEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDI CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHC KGGVIPGEYIPAVDKGIQEQLKSGPLAGYPVVDLGVRLHFGSYHDVDSSELAFKLAASIA CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECEEEEECCCCCCCCHHHHHHHHHHHH FKEGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPL HHHHHHHCCCHHHCCHHEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCH SEMFGYATQLRSLTKGRASYTMEFLKYDDAPNNVAQAVIEARGK HHHHHHHHHHHHHHCCHHHHEEHHHHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA