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The map label for this gene is ccmD [H]

Identifier: 29143995

GI number: 29143995

Start: 3817684

End: 3817896

Strand: Direct

Name: ccmD [H]

Synonym: t3702

Alternate gene names: 29143995

Gene position: 3817684-3817896 (Clockwise)

Preceding gene: 29143994

Following gene: 29143996

Centisome position: 79.67

GC content: 69.48

Gene sequence:

>213_bases
GTGAGTCCGGCATTTTCATCGTGGAGCGATTTTTTCGCCATGGGCGGGTACGCCTTTTTTGTCTGGCTGGCGGTGGCGAT
GACCGTGGCGCCGCTGGCGCTGCTGGCGCTGCACACGGTGCTGCAGCGCCGGGCCATTCTGCGCGGCGTGGCGCAGCAGC
GGGCGCGCGAGGCGCGGATGCGTGCCGCACAGGCGCAACAGGAGGCCGCGTGA

Upstream 100 bases:

>100_bases
TCTTTATGACGCTGGCGCTGATGCGGATGCGCAACCTGATTTTACTGATGGAAAAACGCCGCCCGTGGGTGAGCGAACTG
ATACTGAAAAGGGGGCACCG

Downstream 100 bases:

>100_bases
ACCTGCGACGTAAAAACCGGCTATGGGTGGTCTGCGCGGTGCTGGCGGGCCTGGCGCTGACCACCGCCCTGGTCCTGTAC
GCGCTGCGCGCGAATATCGA

Product: heme exporter protein D2

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmD [H]

Number of amino acids: Translated: 70; Mature: 69

Protein sequence:

>70_residues
MSPAFSSWSDFFAMGGYAFFVWLAVAMTVAPLALLALHTVLQRRAILRGVAQQRAREARMRAAQAQQEAA

Sequences:

>Translated_70_residues
MSPAFSSWSDFFAMGGYAFFVWLAVAMTVAPLALLALHTVLQRRAILRGVAQQRAREARMRAAQAQQEAA
>Mature_69_residues
SPAFSSWSDFFAMGGYAFFVWLAVAMTVAPLALLALHTVLQRRAILRGVAQQRAREARMRAAQAQQEAA

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG3114

COG function: function code U; Heme exporter protein D

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmD/CycX/HelD family [H]

Homologues:

Organism=Escherichia coli, GI1788526, Length=70, Percent_Identity=78.5714285714286, Blast_Score=94, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007078 [H]

Pfam domain/function: PF04995 CcmD [H]

EC number: NA

Molecular weight: Translated: 7712; Mature: 7581

Theoretical pI: Translated: 12.11; Mature: 12.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPAFSSWSDFFAMGGYAFFVWLAVAMTVAPLALLALHTVLQRRAILRGVAQQRAREARM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAAQAQQEAA
HHHHHHHCCC
>Mature Secondary Structure 
SPAFSSWSDFFAMGGYAFFVWLAVAMTVAPLALLALHTVLQRRAILRGVAQQRAREARM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAAQAQQEAA
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]