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The map label for this gene is ybhA [H]

Identifier: 29143911

GI number: 29143911

Start: 3710993

End: 3711727

Strand: Direct

Name: ybhA [H]

Synonym: t3612

Alternate gene names: 29143911

Gene position: 3710993-3711727 (Clockwise)

Preceding gene: 29143910

Following gene: 29143913

Centisome position: 77.44

GC content: 46.53

Gene sequence:

>735_bases
ATGCGATATCGTTTAATCGCTTTTGATCTTGATGGAACGCTGCTAAACCGTAATAAACAAATTCTGCCAGAGTCGCTAAC
CGCTATCCGTCAGATGCAGGACATGGGCTGCCGAATAATGCTTGTCACCGGTCGCTCTCATCGTGAAGCCTATGCGTATT
ATCAAACGCTGGCGCTCACCGAACCGATGATCTGTTGTAACGGAAGTTATATTTATCAACCGGCTCAACAGCAGATCCTT
GATCCGCTGCCGCTGACGCACTTACAAACGGAAAAAATACTGGCGCGGGTATATCCGCTTAAACCGACAATTCGTGCTGA
TGATAAAATAATCTTTCAGGCTGATGAGCTAAGCAGTAGGGAGAATATTTGGCAAATCAGCGTCGTTCATCGGCACATAA
AACAACTACAAAATATTGCTGAGTTTATACAGCATGAATTACAGCTAAGCTGTACCTGGTCCTGGCATCATCAACTGGAT
ATTCTCCAGAAGGGGTGTAGCAAAGGACAAAGCCTCGCCAGATATGCACAGCAACAGCATATCGCAATGCGCGAAGTGAT
GGCGTTTGGCGATAATGATAACGATGCGGAAATGCTACGTTTAGCCGGATTGGGTGTCGCGATGGGGAATGCCAGCGCTC
GGGCAAAGGTGTATGCGGATAGCGTCATTGGTCGGCATAATACGCCAACGATTGCTGATTTTTTGACAACCTTATCCCTT
TCTCAACGTGAATAA

Upstream 100 bases:

>100_bases
AGGCAAAACAATGCCACTGTTTTCTCGCTTATCAGCACCGTCTCGATATTCCATTGCTGAATCACCTGGATGCCTCACGC
TGTTTTAGGATCGGGCGCTC

Downstream 100 bases:

>100_bases
AAAAACCCCGCCGAGTTTTCATTTCGGCAGGGTTTTTATCCGTAAGAACGTTAATTACTCTTCTTTCTGACCACGGTTCG
CACGGCGGCGATCGTTTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MRYRLIAFDLDGTLLNRNKQILPESLTAIRQMQDMGCRIMLVTGRSHREAYAYYQTLALTEPMICCNGSYIYQPAQQQIL
DPLPLTHLQTEKILARVYPLKPTIRADDKIIFQADELSSRENIWQISVVHRHIKQLQNIAEFIQHELQLSCTWSWHHQLD
ILQKGCSKGQSLARYAQQQHIAMREVMAFGDNDNDAEMLRLAGLGVAMGNASARAKVYADSVIGRHNTPTIADFLTTLSL
SQRE

Sequences:

>Translated_244_residues
MRYRLIAFDLDGTLLNRNKQILPESLTAIRQMQDMGCRIMLVTGRSHREAYAYYQTLALTEPMICCNGSYIYQPAQQQIL
DPLPLTHLQTEKILARVYPLKPTIRADDKIIFQADELSSRENIWQISVVHRHIKQLQNIAEFIQHELQLSCTWSWHHQLD
ILQKGCSKGQSLARYAQQQHIAMREVMAFGDNDNDAEMLRLAGLGVAMGNASARAKVYADSVIGRHNTPTIADFLTTLSL
SQRE
>Mature_244_residues
MRYRLIAFDLDGTLLNRNKQILPESLTAIRQMQDMGCRIMLVTGRSHREAYAYYQTLALTEPMICCNGSYIYQPAQQQIL
DPLPLTHLQTEKILARVYPLKPTIRADDKIIFQADELSSRENIWQISVVHRHIKQLQNIAEFIQHELQLSCTWSWHHQLD
ILQKGCSKGQSLARYAQQQHIAMREVMAFGDNDNDAEMLRLAGLGVAMGNASARAKVYADSVIGRHNTPTIADFLTTLSL
SQRE

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates pyridoxalphosphate and erythrose 4-phosphate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI1786982, Length=267, Percent_Identity=37.8277153558052, Blast_Score=181, Evalue=3e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001757
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150
- InterPro:   IPR006380 [H]

Pfam domain/function: PF00702 Hydrolase; PF05116 S6PP [H]

EC number: NA

Molecular weight: Translated: 27881; Mature: 27881

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYRLIAFDLDGTLLNRNKQILPESLTAIRQMQDMGCRIMLVTGRSHREAYAYYQTLALT
CCEEEEEEECCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHC
EPMICCNGSYIYQPAQQQILDPLPLTHLQTEKILARVYPLKPTIRADDKIIFQADELSSR
CCEEEECCCEEECCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHCCCC
ENIWQISVVHRHIKQLQNIAEFIQHELQLSCTWSWHHQLDILQKGCSKGQSLARYAQQQH
CCEEEHHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHCHHHHHHHHHHHH
IAMREVMAFGDNDNDAEMLRLAGLGVAMGNASARAKVYADSVIGRHNTPTIADFLTTLSL
HHHHHHHHCCCCCCHHHHHHHHHCCEEECCCCCHHHEEHHHHCCCCCCCHHHHHHHHHHC
SQRE
CCCC
>Mature Secondary Structure
MRYRLIAFDLDGTLLNRNKQILPESLTAIRQMQDMGCRIMLVTGRSHREAYAYYQTLALT
CCEEEEEEECCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHC
EPMICCNGSYIYQPAQQQILDPLPLTHLQTEKILARVYPLKPTIRADDKIIFQADELSSR
CCEEEECCCEEECCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHCCCC
ENIWQISVVHRHIKQLQNIAEFIQHELQLSCTWSWHHQLDILQKGCSKGQSLARYAQQQH
CCEEEHHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHCHHHHHHHHHHHH
IAMREVMAFGDNDNDAEMLRLAGLGVAMGNASARAKVYADSVIGRHNTPTIADFLTTLSL
HHHHHHHHCCCCCCHHHHHHHHHCCEEECCCCCHHHEEHHHHCCCCCCCHHHHHHHHHHC
SQRE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7665460; 8564363; 8905232; 9278503 [H]